FFCP PHASE1:Mm9::chr5:121459417..121459424,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19894|HGNC=|MCL_coexpression_id=20|UniProt=P47708|association_with_transcript=102bp_to_ENSMUST00000079204,NM_011286,uc008zil.1_5end|description=CAGE_peak_6_at_Rph3a_5end|id=chr5:121459417..121459424,-|ontology_enrichment_celltype=CL:0000117!2.69e-14!23;CL:0000337!2.69e-14!23;CL:0000540!2.00e-09!33;CL:0000047!2.00e-09!33;CL:0000031!2.00e-09!33;CL:0000404!2.00e-09!33;CL:0000393!3.37e-07!39;CL:0000211!3.37e-07!39|ontology_enrichment_celltype_v019_2=CL:0002610,6.59e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.60e-37!63;UBERON:0001049!8.32e-33!52;UBERON:0005068!8.32e-33!52;UBERON:0006241!8.32e-33!52;UBERON:0007135!8.32e-33!52;UBERON:0001017!2.89e-32!73;UBERON:0005743!2.89e-32!73;UBERON:0000955!2.38e-31!50;UBERON:0006238!2.38e-31!50;UBERON:0002346!3.89e-31!71;UBERON:0003075!3.89e-31!71;UBERON:0007284!3.89e-31!71;UBERON:0000073!5.14e-31!75;UBERON:0001016!5.14e-31!75;UBERON:0002616!3.30e-30!49;UBERON:0004121!6.94e-29!102;UBERON:0000924!6.94e-29!102;UBERON:0006601!6.94e-29!102;UBERON:0003056!3.72e-28!49;UBERON:0007811!1.97e-24!86;UBERON:0003080!8.33e-23!40;UBERON:0002020!1.37e-22!34;UBERON:0002780!1.47e-21!39;UBERON:0001890!1.47e-21!39;UBERON:0006240!1.47e-21!39;UBERON:0000153!3.84e-21!94;UBERON:0002791!9.68e-18!29;UBERON:0003528!9.68e-18!29;UBERON:0001893!9.68e-18!29;UBERON:0002021!3.88e-13!10;UBERON:0000411!3.88e-13!10;UBERON:0001950!3.88e-13!10;UBERON:0002619!4.03e-13!17;UBERON:0000956!1.07e-11!21;UBERON:0001869!1.07e-11!21;UBERON:0000203!1.07e-11!21;UBERON:0003076!2.52e-10!12;UBERON:0003057!2.52e-10!12;UBERON:0002298!4.25e-09!6;UBERON:0000025!1.60e-08!114;UBERON:0004111!2.15e-08!122;UBERON:0002240!1.21e-07!6;UBERON:0005174!1.21e-07!6;UBERON:0001137!1.21e-07!6;UBERON:0002420!2.07e-07!8;UBERON:0007245!2.07e-07!8;UBERON:0010009!2.07e-07!8;UBERON:0010011!2.07e-07!8;UBERON:0000454!2.07e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.84e-30,54;UBERON:0001049,3.82e-26,52;UBERON:0005068,3.82e-26,52;UBERON:0006241,3.82e-26,52;UBERON:0007135,3.82e-26,52;UBERON:0001017,1.01e-25,73;UBERON:0001016,6.49e-25,75;UBERON:0002616,3.06e-24,46;UBERON:0000955,1.22e-23,47;UBERON:0006238,1.22e-23,47;UBERON:0002346,1.72e-22,64;UBERON:0003075,1.72e-22,64;UBERON:0007284,1.72e-22,64;UBERON:0004121,2.27e-20,95;UBERON:0000924,2.27e-20,95;UBERON:0006601,2.27e-20,95;UBERON:0010371,3.55e-19,73;UBERON:0002021,8.75e-19,10;UBERON:0000411,8.75e-19,10;UBERON:0001950,8.75e-19,10;UBERON:0003080,3.38e-17,40;UBERON:0003528,7.38e-16,29;UBERON:0002791,7.38e-16,29;UBERON:0001893,7.38e-16,29;UBERON:0002020,1.88e-15,34;UBERON:0002780,2.59e-15,39;UBERON:0001890,2.59e-15,39;UBERON:0006240,2.59e-15,39;UBERON:0003056,2.76e-15,49;UBERON:0010314,2.68e-14,92;UBERON:0002619,1.75e-13,17;UBERON:0000956,2.42e-13,21;UBERON:0001869,2.42e-13,21;UBERON:0000203,2.42e-13,21;UBERON:0004684,6.59e-11,3;UBERON:0002275,6.59e-11,3;UBERON:0003076,8.98e-10,12;UBERON:0003057,8.98e-10,12;UBERON:0000025,1.43e-09,114;UBERON:0004733,2.44e-09,6;UBERON:0004732,2.44e-09,6;UBERON:0002028,2.44e-09,6;UBERON:0007277,2.44e-09,6;UBERON:0004111,1.17e-08,122;UBERON:0001896,2.90e-08,2;UBERON:0002298,2.90e-08,2;UBERON:0005290,2.90e-08,2;UBERON:0010096,2.90e-08,2;UBERON:0002950,9.32e-08,4;UBERON:0001891,9.32e-08,4;UBERON:0009616,9.32e-08,4;UBERON:0010286,9.32e-08,4|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.883474163806454,0.367472397644862,0.191690942036473,0,3.30347642998166,3.95830748064082,4.30098293117482,0.131886287730194,0.731901148819277,0,2.23346399201105,2.8138130501584,0.763991238884051,2.94628585473668,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51336956413857,2.51336048176146,0,0,0,0,3.74476598512057,2.74500361691176,0.753926112677186,3.99795936442236,3.58001640262463,2.28566849015516,4.70499662896497,0,0,0,0.420883711772948,0,0.229902104433473,0,0.452114453507145,0.95251098811859,0.384341160854549,0.843315521037559,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50918126935297,5.86058432961016,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,2.29158205375759,1.71853182343688,2.74033007908257,0.755393897389701,2.02506750069542,3.15224842256954,4.53142408984205,2.5888015587591,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.70990322463735,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0|short_description=p6@Rph3a}} | ||
|EntrezGene=19894 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=P47708 | |||
|association_with_transcript=102bp_to_ENSMUST00000079204,NM_011286,uc008zil.1_5end | |||
|description=CAGE_peak_6_at_Rph3a_5end | |||
|id=chr5:121459417..121459424,- | |||
|ontology_enrichment_celltype=CL:0000117!2.69e-14!23;CL:0000337!2.69e-14!23;CL:0000540!2.00e-09!33;CL:0000047!2.00e-09!33;CL:0000031!2.00e-09!33;CL:0000404!2.00e-09!33;CL:0000393!3.37e-07!39;CL:0000211!3.37e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.59e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.60e-37!63;UBERON:0001049!8.32e-33!52;UBERON:0005068!8.32e-33!52;UBERON:0006241!8.32e-33!52;UBERON:0007135!8.32e-33!52;UBERON:0001017!2.89e-32!73;UBERON:0005743!2.89e-32!73;UBERON:0000955!2.38e-31!50;UBERON:0006238!2.38e-31!50;UBERON:0002346!3.89e-31!71;UBERON:0003075!3.89e-31!71;UBERON:0007284!3.89e-31!71;UBERON:0000073!5.14e-31!75;UBERON:0001016!5.14e-31!75;UBERON:0002616!3.30e-30!49;UBERON:0004121!6.94e-29!102;UBERON:0000924!6.94e-29!102;UBERON:0006601!6.94e-29!102;UBERON:0003056!3.72e-28!49;UBERON:0007811!1.97e-24!86;UBERON:0003080!8.33e-23!40;UBERON:0002020!1.37e-22!34;UBERON:0002780!1.47e-21!39;UBERON:0001890!1.47e-21!39;UBERON:0006240!1.47e-21!39;UBERON:0000153!3.84e-21!94;UBERON:0002791!9.68e-18!29;UBERON:0003528!9.68e-18!29;UBERON:0001893!9.68e-18!29;UBERON:0002021!3.88e-13!10;UBERON:0000411!3.88e-13!10;UBERON:0001950!3.88e-13!10;UBERON:0002619!4.03e-13!17;UBERON:0000956!1.07e-11!21;UBERON:0001869!1.07e-11!21;UBERON:0000203!1.07e-11!21;UBERON:0003076!2.52e-10!12;UBERON:0003057!2.52e-10!12;UBERON:0002298!4.25e-09!6;UBERON:0000025!1.60e-08!114;UBERON:0004111!2.15e-08!122;UBERON:0002240!1.21e-07!6;UBERON:0005174!1.21e-07!6;UBERON:0001137!1.21e-07!6;UBERON:0002420!2.07e-07!8;UBERON:0007245!2.07e-07!8;UBERON:0010009!2.07e-07!8;UBERON:0010011!2.07e-07!8;UBERON:0000454!2.07e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.84e-30,54;UBERON:0001049,3.82e-26,52;UBERON:0005068,3.82e-26,52;UBERON:0006241,3.82e-26,52;UBERON:0007135,3.82e-26,52;UBERON:0001017,1.01e-25,73;UBERON:0001016,6.49e-25,75;UBERON:0002616,3.06e-24,46;UBERON:0000955,1.22e-23,47;UBERON:0006238,1.22e-23,47;UBERON:0002346,1.72e-22,64;UBERON:0003075,1.72e-22,64;UBERON:0007284,1.72e-22,64;UBERON:0004121,2.27e-20,95;UBERON:0000924,2.27e-20,95;UBERON:0006601,2.27e-20,95;UBERON:0010371,3.55e-19,73;UBERON:0002021,8.75e-19,10;UBERON:0000411,8.75e-19,10;UBERON:0001950,8.75e-19,10;UBERON:0003080,3.38e-17,40;UBERON:0003528,7.38e-16,29;UBERON:0002791,7.38e-16,29;UBERON:0001893,7.38e-16,29;UBERON:0002020,1.88e-15,34;UBERON:0002780,2.59e-15,39;UBERON:0001890,2.59e-15,39;UBERON:0006240,2.59e-15,39;UBERON:0003056,2.76e-15,49;UBERON:0010314,2.68e-14,92;UBERON:0002619,1.75e-13,17;UBERON:0000956,2.42e-13,21;UBERON:0001869,2.42e-13,21;UBERON:0000203,2.42e-13,21;UBERON:0004684,6.59e-11,3;UBERON:0002275,6.59e-11,3;UBERON:0003076,8.98e-10,12;UBERON:0003057,8.98e-10,12;UBERON:0000025,1.43e-09,114;UBERON:0004733,2.44e-09,6;UBERON:0004732,2.44e-09,6;UBERON:0002028,2.44e-09,6;UBERON:0007277,2.44e-09,6;UBERON:0004111,1.17e-08,122;UBERON:0001896,2.90e-08,2;UBERON:0002298,2.90e-08,2;UBERON:0005290,2.90e-08,2;UBERON:0010096,2.90e-08,2;UBERON:0002950,9.32e-08,4;UBERON:0001891,9.32e-08,4;UBERON:0009616,9.32e-08,4;UBERON:0010286,9.32e-08,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.883474163806454,0.367472397644862,0.191690942036473,0,3.30347642998166,3.95830748064082,4.30098293117482,0.131886287730194,0.731901148819277,0,2.23346399201105,2.8138130501584,0.763991238884051,2.94628585473668,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51336956413857,2.51336048176146,0,0,0,0,3.74476598512057,2.74500361691176,0.753926112677186,3.99795936442236,3.58001640262463,2.28566849015516,4.70499662896497,0,0,0,0.420883711772948,0,0.229902104433473,0,0.452114453507145,0.95251098811859,0.384341160854549,0.843315521037559,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50918126935297,5.86058432961016,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,2.29158205375759,1.71853182343688,2.74033007908257,0.755393897389701,2.02506750069542,3.15224842256954,4.53142408984205,2.5888015587591,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.70990322463735,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p6@Rph3a | |||
}} |
Revision as of 06:15, 14 September 2013
Short description: | p6@Rph3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rph3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 102bp_to_ENSMUST00000079204, NM_011286, uc008zil.1_5end |
EntrezGene: | Rph3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.59e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.