FFCP PHASE1:Mm9::chr5:139605956..139605965,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19085|HGNC=|MCL_coexpression_id=2|UniProt=D3YTM5|association_with_transcript=147bp_to_ENSMUST00000129851_5end|description=CAGE_peak_5_at_Prkar1b_5end|id=chr5:139605956..139605965,-|ontology_enrichment_celltype=CL:0000117!8.41e-11!23;CL:0000337!8.41e-11!23;CL:0000540!8.57e-09!33;CL:0000047!8.57e-09!33;CL:0000031!8.57e-09!33;CL:0000404!8.57e-09!33;CL:0002319!4.42e-07!43;CL:0000221!9.58e-07!44;CL:0000133!9.58e-07!44|ontology_enrichment_celltype_v019_2=CL:0002614,2.03e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.43e-27!71;UBERON:0003075!6.43e-27!71;UBERON:0007284!6.43e-27!71;UBERON:0001049!5.34e-26!52;UBERON:0005068!5.34e-26!52;UBERON:0006241!5.34e-26!52;UBERON:0007135!5.34e-26!52;UBERON:0000073!2.03e-24!75;UBERON:0001016!2.03e-24!75;UBERON:0000955!1.04e-23!50;UBERON:0006238!1.04e-23!50;UBERON:0001017!1.72e-23!73;UBERON:0005743!1.72e-23!73;UBERON:0002020!5.22e-23!34;UBERON:0002616!7.96e-23!49;UBERON:0000033!8.88e-23!63;UBERON:0004121!1.42e-22!102;UBERON:0000924!1.42e-22!102;UBERON:0006601!1.42e-22!102;UBERON:0003056!1.37e-20!49;UBERON:0002791!4.89e-20!29;UBERON:0003528!4.89e-20!29;UBERON:0001893!4.89e-20!29;UBERON:0003080!5.44e-20!40;UBERON:0002780!4.59e-19!39;UBERON:0001890!4.59e-19!39;UBERON:0006240!4.59e-19!39;UBERON:0000956!1.65e-13!21;UBERON:0001869!1.65e-13!21;UBERON:0000203!1.65e-13!21;UBERON:0007811!4.35e-12!86;UBERON:0002619!1.18e-11!17;UBERON:0002021!6.06e-11!10;UBERON:0000411!6.06e-11!10;UBERON:0001950!6.06e-11!10;UBERON:0000153!2.13e-10!94;UBERON:0002420!8.51e-08!8;UBERON:0007245!8.51e-08!8;UBERON:0010009!8.51e-08!8;UBERON:0010011!8.51e-08!8;UBERON:0000454!8.51e-08!8;UBERON:0000025!1.34e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000955,4.49e-41,47;UBERON:0006238,4.49e-41,47;UBERON:0002616,7.00e-39,46;UBERON:0000073,8.42e-38,54;UBERON:0001049,9.70e-37,52;UBERON:0005068,9.70e-37,52;UBERON:0006241,9.70e-37,52;UBERON:0007135,9.70e-37,52;UBERON:0001017,2.90e-33,73;UBERON:0001016,3.20e-32,75;UBERON:0003080,4.33e-32,40;UBERON:0003528,7.04e-31,29;UBERON:0002791,7.04e-31,29;UBERON:0001893,7.04e-31,29;UBERON:0002780,7.05e-30,39;UBERON:0001890,7.05e-30,39;UBERON:0006240,7.05e-30,39;UBERON:0002346,8.48e-29,64;UBERON:0003075,8.48e-29,64;UBERON:0007284,8.48e-29,64;UBERON:0002021,5.81e-28,10;UBERON:0000411,5.81e-28,10;UBERON:0001950,5.81e-28,10;UBERON:0002020,1.03e-25,34;UBERON:0003056,2.79e-25,49;UBERON:0010371,1.50e-24,73;UBERON:0004121,3.38e-24,95;UBERON:0000924,3.38e-24,95;UBERON:0006601,3.38e-24,95;UBERON:0002619,6.84e-22,17;UBERON:0000956,1.45e-20,21;UBERON:0001869,1.45e-20,21;UBERON:0000203,1.45e-20,21;UBERON:0010314,2.65e-18,92;UBERON:0000025,1.17e-13,114;UBERON:0004111,2.20e-12,122;UBERON:0002420,2.28e-11,8;UBERON:0007245,2.28e-11,8;UBERON:0010009,2.28e-11,8;UBERON:0010011,2.28e-11,8;UBERON:0000454,2.28e-11,8;UBERON:0002950,5.20e-11,4;UBERON:0001891,5.20e-11,4;UBERON:0009616,5.20e-11,4;UBERON:0010286,5.20e-11,4;UBERON:0011216,9.95e-09,194;UBERON:0002038,2.03e-08,3;UBERON:0009663,2.03e-08,3;UBERON:0009661,2.03e-08,3;UBERON:0000125,2.03e-08,3;UBERON:0002308,2.03e-08,3;UBERON:0004733,1.57e-07,6;UBERON:0004732,1.57e-07,6;UBERON:0002028,1.57e-07,6;UBERON:0007277,1.57e-07,6;UBERON:0000483,6.16e-07,174;UBERON:0007023,8.58e-07,51;UBERON:0000119,8.61e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0.7104801149461,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,0.662605622854841,0.489963196859816,0.383381884072945,0,0,1.65993539510744,2.30409799884365,0.923204014111357,1.9212405156506,0.52091337055676,2.23346399201105,1.12552522006336,2.29197371665215,0.589257170947335,0.284743361598206,0.186399445825301,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,5.5628351432194,1.8850203613211,0,0,0,0,2.84602214869163,2.74500361691176,1.50785222535437,13.0368240144207,14.0643501531682,1.87009240103604,2.27137768294861,0,0.124406970610093,0,0.420883711772948,0,0,0,0.60281927134286,0.0680364991513279,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.02904612379284,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0.140271639780637,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.476087281772027,0,0,0.44292937929755,0,0,0,0.144649058581512,0,0,0,0,2.40825884981688,1.99259867206745,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,2.24924921495265,0.141940085208269,0,0.162886959353576,0.1649701229725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| ||
|EntrezGene=19085 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=D3YTM5 | |||
|association_with_transcript=147bp_to_ENSMUST00000129851_5end | |||
|description=CAGE_peak_5_at_Prkar1b_5end | |||
|id=chr5:139605956..139605965,- | |||
|ontology_enrichment_celltype=CL:0000117!8.41e-11!23;CL:0000337!8.41e-11!23;CL:0000540!8.57e-09!33;CL:0000047!8.57e-09!33;CL:0000031!8.57e-09!33;CL:0000404!8.57e-09!33;CL:0002319!4.42e-07!43;CL:0000221!9.58e-07!44;CL:0000133!9.58e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,2.03e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.43e-27!71;UBERON:0003075!6.43e-27!71;UBERON:0007284!6.43e-27!71;UBERON:0001049!5.34e-26!52;UBERON:0005068!5.34e-26!52;UBERON:0006241!5.34e-26!52;UBERON:0007135!5.34e-26!52;UBERON:0000073!2.03e-24!75;UBERON:0001016!2.03e-24!75;UBERON:0000955!1.04e-23!50;UBERON:0006238!1.04e-23!50;UBERON:0001017!1.72e-23!73;UBERON:0005743!1.72e-23!73;UBERON:0002020!5.22e-23!34;UBERON:0002616!7.96e-23!49;UBERON:0000033!8.88e-23!63;UBERON:0004121!1.42e-22!102;UBERON:0000924!1.42e-22!102;UBERON:0006601!1.42e-22!102;UBERON:0003056!1.37e-20!49;UBERON:0002791!4.89e-20!29;UBERON:0003528!4.89e-20!29;UBERON:0001893!4.89e-20!29;UBERON:0003080!5.44e-20!40;UBERON:0002780!4.59e-19!39;UBERON:0001890!4.59e-19!39;UBERON:0006240!4.59e-19!39;UBERON:0000956!1.65e-13!21;UBERON:0001869!1.65e-13!21;UBERON:0000203!1.65e-13!21;UBERON:0007811!4.35e-12!86;UBERON:0002619!1.18e-11!17;UBERON:0002021!6.06e-11!10;UBERON:0000411!6.06e-11!10;UBERON:0001950!6.06e-11!10;UBERON:0000153!2.13e-10!94;UBERON:0002420!8.51e-08!8;UBERON:0007245!8.51e-08!8;UBERON:0010009!8.51e-08!8;UBERON:0010011!8.51e-08!8;UBERON:0000454!8.51e-08!8;UBERON:0000025!1.34e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,4.49e-41,47;UBERON:0006238,4.49e-41,47;UBERON:0002616,7.00e-39,46;UBERON:0000073,8.42e-38,54;UBERON:0001049,9.70e-37,52;UBERON:0005068,9.70e-37,52;UBERON:0006241,9.70e-37,52;UBERON:0007135,9.70e-37,52;UBERON:0001017,2.90e-33,73;UBERON:0001016,3.20e-32,75;UBERON:0003080,4.33e-32,40;UBERON:0003528,7.04e-31,29;UBERON:0002791,7.04e-31,29;UBERON:0001893,7.04e-31,29;UBERON:0002780,7.05e-30,39;UBERON:0001890,7.05e-30,39;UBERON:0006240,7.05e-30,39;UBERON:0002346,8.48e-29,64;UBERON:0003075,8.48e-29,64;UBERON:0007284,8.48e-29,64;UBERON:0002021,5.81e-28,10;UBERON:0000411,5.81e-28,10;UBERON:0001950,5.81e-28,10;UBERON:0002020,1.03e-25,34;UBERON:0003056,2.79e-25,49;UBERON:0010371,1.50e-24,73;UBERON:0004121,3.38e-24,95;UBERON:0000924,3.38e-24,95;UBERON:0006601,3.38e-24,95;UBERON:0002619,6.84e-22,17;UBERON:0000956,1.45e-20,21;UBERON:0001869,1.45e-20,21;UBERON:0000203,1.45e-20,21;UBERON:0010314,2.65e-18,92;UBERON:0000025,1.17e-13,114;UBERON:0004111,2.20e-12,122;UBERON:0002420,2.28e-11,8;UBERON:0007245,2.28e-11,8;UBERON:0010009,2.28e-11,8;UBERON:0010011,2.28e-11,8;UBERON:0000454,2.28e-11,8;UBERON:0002950,5.20e-11,4;UBERON:0001891,5.20e-11,4;UBERON:0009616,5.20e-11,4;UBERON:0010286,5.20e-11,4;UBERON:0011216,9.95e-09,194;UBERON:0002038,2.03e-08,3;UBERON:0009663,2.03e-08,3;UBERON:0009661,2.03e-08,3;UBERON:0000125,2.03e-08,3;UBERON:0002308,2.03e-08,3;UBERON:0004733,1.57e-07,6;UBERON:0004732,1.57e-07,6;UBERON:0002028,1.57e-07,6;UBERON:0007277,1.57e-07,6;UBERON:0000483,6.16e-07,174;UBERON:0007023,8.58e-07,51;UBERON:0000119,8.61e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0.7104801149461,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,0.662605622854841,0.489963196859816,0.383381884072945,0,0,1.65993539510744,2.30409799884365,0.923204014111357,1.9212405156506,0.52091337055676,2.23346399201105,1.12552522006336,2.29197371665215,0.589257170947335,0.284743361598206,0.186399445825301,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,5.5628351432194,1.8850203613211,0,0,0,0,2.84602214869163,2.74500361691176,1.50785222535437,13.0368240144207,14.0643501531682,1.87009240103604,2.27137768294861,0,0.124406970610093,0,0.420883711772948,0,0,0,0.60281927134286,0.0680364991513279,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.02904612379284,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0.140271639780637,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.476087281772027,0,0,0.44292937929755,0,0,0,0.144649058581512,0,0,0,0,2.40825884981688,1.99259867206745,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,2.24924921495265,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0.590603785761546,0,0,0.363533729477506,0,0,0,0,1.70219802876894,0,0,0.428674070063185,0,0.356737635204141,0,0,0,0,0,0,0,0,0.119372344003136,0,0,3.52308073819968,0,0.206386867963223,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.76195141904306,1.14579102687879,2.57779773515531,10.2762377965596,6.7985450765073,6.07520250208625,8.55610286126019,14.5005570874945,10.3552062350364,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0,0,0.128050304809739,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.470546902076653,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0.818462086339379,0.154936841185966,0.385813221962283,0.749431733813838,0,0.214871054048298,0,0,0 | |||
|short_description=p5@Prkar1b | |||
}} |
Revision as of 06:51, 14 September 2013
Short description: | p5@Prkar1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Prkar1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 147bp_to_ENSMUST00000129851_5end |
EntrezGene: | Prkar1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 2.03e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.