FFCP PHASE1:Mm9::chr6:85978797..85978808,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11519|HGNC=|MCL_coexpression_id=13|UniProt=Q9QYB8|association_with_transcript=75bp_to_uc009crc.1,uc009crd.1,uc009cre.1,uc009crf.1_5end|description=CAGE_peak_6_at_Add2_5end|id=chr6:85978797..85978808,+|ontology_enrichment_celltype=CL:0000540!1.02e-19!33;CL:0000047!1.02e-19!33;CL:0000031!1.02e-19!33;CL:0000404!1.02e-19!33;CL:0000117!1.29e-18!23;CL:0000337!1.29e-18!23;CL:0000393!2.85e-16!39;CL:0000211!2.85e-16!39;CL:0002319!1.49e-13!43;CL:0000221!6.28e-13!44;CL:0000133!6.28e-13!44;CL:0000055!4.55e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-28,23;CL:0000337,1.02e-28,23;CL:0000540,7.02e-24,33;CL:0000047,7.02e-24,33;CL:0000031,7.02e-24,33;CL:0000404,7.02e-24,33;CL:0000393,7.73e-19,39;CL:0000211,7.73e-19,39;CL:0002319,2.80e-16,43;CL:0000221,1.03e-15,44;CL:0000133,1.03e-15,44;CL:0002609,1.83e-09,6;CL:0002321,5.99e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.10e-32!75;UBERON:0001016!5.10e-32!75;UBERON:0001017!1.83e-31!73;UBERON:0005743!1.83e-31!73;UBERON:0002346!2.54e-30!71;UBERON:0003075!2.54e-30!71;UBERON:0007284!2.54e-30!71;UBERON:0004121!2.61e-29!102;UBERON:0000924!2.61e-29!102;UBERON:0006601!2.61e-29!102;UBERON:0000033!2.91e-27!63;UBERON:0001049!1.49e-26!52;UBERON:0005068!1.49e-26!52;UBERON:0006241!1.49e-26!52;UBERON:0007135!1.49e-26!52;UBERON:0000955!1.43e-25!50;UBERON:0006238!1.43e-25!50;UBERON:0003056!1.78e-25!49;UBERON:0002616!9.70e-25!49;UBERON:0002020!4.33e-22!34;UBERON:0003080!1.61e-21!40;UBERON:0002780!9.23e-21!39;UBERON:0001890!9.23e-21!39;UBERON:0006240!9.23e-21!39;UBERON:0002791!1.02e-18!29;UBERON:0003528!1.02e-18!29;UBERON:0001893!1.02e-18!29;UBERON:0007811!8.17e-14!86;UBERON:0000956!8.99e-13!21;UBERON:0001869!8.99e-13!21;UBERON:0000203!8.99e-13!21;UBERON:0000153!6.88e-11!94;UBERON:0002619!1.01e-09!17;UBERON:0002021!7.01e-08!10;UBERON:0000411!7.01e-08!10;UBERON:0001950!7.01e-08!10;UBERON:0002420!3.23e-07!8;UBERON:0007245!3.23e-07!8;UBERON:0010009!3.23e-07!8;UBERON:0010011!3.23e-07!8;UBERON:0000454!3.23e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.66e-40,73;UBERON:0000073,1.86e-39,54;UBERON:0001016,8.47e-39,75;UBERON:0002346,4.44e-37,64;UBERON:0003075,4.44e-37,64;UBERON:0007284,4.44e-37,64;UBERON:0001049,1.01e-36,52;UBERON:0005068,1.01e-36,52;UBERON:0006241,1.01e-36,52;UBERON:0007135,1.01e-36,52;UBERON:0004121,1.33e-35,95;UBERON:0000924,1.33e-35,95;UBERON:0006601,1.33e-35,95;UBERON:0002020,3.33e-35,34;UBERON:0000955,1.38e-31,47;UBERON:0006238,1.38e-31,47;UBERON:0010371,1.12e-30,73;UBERON:0003056,1.57e-30,49;UBERON:0002616,2.46e-30,46;UBERON:0003528,8.43e-30,29;UBERON:0002791,8.43e-30,29;UBERON:0001893,8.43e-30,29;UBERON:0003080,6.26e-28,40;UBERON:0002780,9.06e-27,39;UBERON:0001890,9.06e-27,39;UBERON:0006240,9.06e-27,39;UBERON:0010314,2.51e-21,92;UBERON:0000956,2.91e-20,21;UBERON:0001869,2.91e-20,21;UBERON:0000203,2.91e-20,21;UBERON:0002619,2.33e-15,17;UBERON:0002021,1.28e-11,10;UBERON:0000411,1.28e-11,10;UBERON:0001950,1.28e-11,10;UBERON:0002420,1.45e-10,8;UBERON:0007245,1.45e-10,8;UBERON:0010009,1.45e-10,8;UBERON:0010011,1.45e-10,8;UBERON:0000454,1.45e-10,8;UBERON:0000025,8.50e-10,114;UBERON:0003076,7.16e-09,12;UBERON:0003057,7.16e-09,12;UBERON:0004111,2.13e-08,122;UBERON:0000369,7.83e-08,5;UBERON:0002435,7.83e-08,5;UBERON:0000204,7.83e-08,5;UBERON:0010082,7.83e-08,5;UBERON:0002240,3.39e-07,6;UBERON:0005174,3.39e-07,6;UBERON:0001137,3.39e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,8.9019242778223,4.23192783417626,7.60597684207415,0,0,0,0,0,0,0,6.22137673850866,7.42532660824299,7.78202357000113,2.57085885963423,2.65042249141936,7.96190194897201,7.66763768145891,8.27296907949019,4.40463523997555,4.08599481872601,5.68344173048101,12.1335384711778,11.8933936683133,10.939180781692,3.07101298901519,3.37657566019008,3.81995619442025,5.00868595305235,4.41352210477219,4.28718725398191,0.37863096666592,0.755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0.913396434936424,0.691846491768175,0.60289056221049,0.470354828542819,0,0,0,0,0,0,0,0,3.51336956413857,2.93225389538837,0,0,0,0,4.49371918214468,3.20250421973039,5.52879149296603,3.82413504423008,6.13717097592793,3.74018480207208,5.353961681236,0,0,0,0.210441855886474,0.520481771850815,3.21862946206862,3.06105620669094,1.9591626318643,1.7009124787832,2.17793324484245,2.34254311399322,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,6.38008596751563,0.660837565967596,0,0.853153002140936,0.464473343720877,0.644337306610467,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0.398282546508734,0.189667900953082,0.799739588268102,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,4.65596710964597,4.21962071731931,0,0,0.631016438832513,0,0.861693590931196,0.238968797952552,1.11399337041197,1.13230612315533,1.61924280669958,0.876767573733936,1.58115111178609,5.46246237917072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,1.98067203434441,0.646793418913773,0.857348140126369,0,0.535106452806212,0.329098041204242,0.304464949114599,0.469343416127421,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,6.21227026878773,4.14292712856459,5.15605962095457,2.57779773515531,2.74033007908257,4.5323633843382,4.72515750162264,3.60256962579376,3.62513927187364,3.10656187051092,1.55681021376265,2.79317411380722,2.21953687480374,0.972426868273176,1.88651846365184,1.65459157605013,0.888986911206461,0.412070114477788,0,1.01078884705519,0.760437899670719,0.754505365544305,1.03005658216871,1.02440243847791,0.976402972245426,0.476293691283074,1.27472758539341,0.77163688185482,0.412085900803307,1.17759136107518,0.685738504770831,1.06485483695602,0.715308569841963,0.581385666529314,1.41164070622996,0.507687647350059,0.548783918618318,0,0.543216455383447,1.68342681497322,0.830445126869219,1.37906275325789,0,2.16911577660352,0.385813221962283,2.74791635731741,0.701794825336225,1.28922632428979,0.191288332068843,0.220591419119515,0|short_description=p6@Add2}} | ||
|EntrezGene=11519 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q9QYB8 | |||
|association_with_transcript=75bp_to_uc009crc.1,uc009crd.1,uc009cre.1,uc009crf.1_5end | |||
|description=CAGE_peak_6_at_Add2_5end | |||
|id=chr6:85978797..85978808,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.02e-19!33;CL:0000047!1.02e-19!33;CL:0000031!1.02e-19!33;CL:0000404!1.02e-19!33;CL:0000117!1.29e-18!23;CL:0000337!1.29e-18!23;CL:0000393!2.85e-16!39;CL:0000211!2.85e-16!39;CL:0002319!1.49e-13!43;CL:0000221!6.28e-13!44;CL:0000133!6.28e-13!44;CL:0000055!4.55e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-28,23;CL:0000337,1.02e-28,23;CL:0000540,7.02e-24,33;CL:0000047,7.02e-24,33;CL:0000031,7.02e-24,33;CL:0000404,7.02e-24,33;CL:0000393,7.73e-19,39;CL:0000211,7.73e-19,39;CL:0002319,2.80e-16,43;CL:0000221,1.03e-15,44;CL:0000133,1.03e-15,44;CL:0002609,1.83e-09,6;CL:0002321,5.99e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.10e-32!75;UBERON:0001016!5.10e-32!75;UBERON:0001017!1.83e-31!73;UBERON:0005743!1.83e-31!73;UBERON:0002346!2.54e-30!71;UBERON:0003075!2.54e-30!71;UBERON:0007284!2.54e-30!71;UBERON:0004121!2.61e-29!102;UBERON:0000924!2.61e-29!102;UBERON:0006601!2.61e-29!102;UBERON:0000033!2.91e-27!63;UBERON:0001049!1.49e-26!52;UBERON:0005068!1.49e-26!52;UBERON:0006241!1.49e-26!52;UBERON:0007135!1.49e-26!52;UBERON:0000955!1.43e-25!50;UBERON:0006238!1.43e-25!50;UBERON:0003056!1.78e-25!49;UBERON:0002616!9.70e-25!49;UBERON:0002020!4.33e-22!34;UBERON:0003080!1.61e-21!40;UBERON:0002780!9.23e-21!39;UBERON:0001890!9.23e-21!39;UBERON:0006240!9.23e-21!39;UBERON:0002791!1.02e-18!29;UBERON:0003528!1.02e-18!29;UBERON:0001893!1.02e-18!29;UBERON:0007811!8.17e-14!86;UBERON:0000956!8.99e-13!21;UBERON:0001869!8.99e-13!21;UBERON:0000203!8.99e-13!21;UBERON:0000153!6.88e-11!94;UBERON:0002619!1.01e-09!17;UBERON:0002021!7.01e-08!10;UBERON:0000411!7.01e-08!10;UBERON:0001950!7.01e-08!10;UBERON:0002420!3.23e-07!8;UBERON:0007245!3.23e-07!8;UBERON:0010009!3.23e-07!8;UBERON:0010011!3.23e-07!8;UBERON:0000454!3.23e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.66e-40,73;UBERON:0000073,1.86e-39,54;UBERON:0001016,8.47e-39,75;UBERON:0002346,4.44e-37,64;UBERON:0003075,4.44e-37,64;UBERON:0007284,4.44e-37,64;UBERON:0001049,1.01e-36,52;UBERON:0005068,1.01e-36,52;UBERON:0006241,1.01e-36,52;UBERON:0007135,1.01e-36,52;UBERON:0004121,1.33e-35,95;UBERON:0000924,1.33e-35,95;UBERON:0006601,1.33e-35,95;UBERON:0002020,3.33e-35,34;UBERON:0000955,1.38e-31,47;UBERON:0006238,1.38e-31,47;UBERON:0010371,1.12e-30,73;UBERON:0003056,1.57e-30,49;UBERON:0002616,2.46e-30,46;UBERON:0003528,8.43e-30,29;UBERON:0002791,8.43e-30,29;UBERON:0001893,8.43e-30,29;UBERON:0003080,6.26e-28,40;UBERON:0002780,9.06e-27,39;UBERON:0001890,9.06e-27,39;UBERON:0006240,9.06e-27,39;UBERON:0010314,2.51e-21,92;UBERON:0000956,2.91e-20,21;UBERON:0001869,2.91e-20,21;UBERON:0000203,2.91e-20,21;UBERON:0002619,2.33e-15,17;UBERON:0002021,1.28e-11,10;UBERON:0000411,1.28e-11,10;UBERON:0001950,1.28e-11,10;UBERON:0002420,1.45e-10,8;UBERON:0007245,1.45e-10,8;UBERON:0010009,1.45e-10,8;UBERON:0010011,1.45e-10,8;UBERON:0000454,1.45e-10,8;UBERON:0000025,8.50e-10,114;UBERON:0003076,7.16e-09,12;UBERON:0003057,7.16e-09,12;UBERON:0004111,2.13e-08,122;UBERON:0000369,7.83e-08,5;UBERON:0002435,7.83e-08,5;UBERON:0000204,7.83e-08,5;UBERON:0010082,7.83e-08,5;UBERON:0002240,3.39e-07,6;UBERON:0005174,3.39e-07,6;UBERON:0001137,3.39e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,8.9019242778223,4.23192783417626,7.60597684207415,0,0,0,0,0,0,0,6.22137673850866,7.42532660824299,7.78202357000113,2.57085885963423,2.65042249141936,7.96190194897201,7.66763768145891,8.27296907949019,4.40463523997555,4.08599481872601,5.68344173048101,12.1335384711778,11.8933936683133,10.939180781692,3.07101298901519,3.37657566019008,3.81995619442025,5.00868595305235,4.41352210477219,4.28718725398191,0.37863096666592,0.755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0.913396434936424,0.691846491768175,0.60289056221049,0.470354828542819,0,0,0,0,0,0,0,0,3.51336956413857,2.93225389538837,0,0,0,0,4.49371918214468,3.20250421973039,5.52879149296603,3.82413504423008,6.13717097592793,3.74018480207208,5.353961681236,0,0,0,0.210441855886474,0.520481771850815,3.21862946206862,3.06105620669094,1.9591626318643,1.7009124787832,2.17793324484245,2.34254311399322,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,6.38008596751563,0.660837565967596,0,0.853153002140936,0.464473343720877,0.644337306610467,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0.398282546508734,0.189667900953082,0.799739588268102,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,4.65596710964597,4.21962071731931,0,0,0.631016438832513,0,0.861693590931196,0.238968797952552,1.11399337041197,1.13230612315533,1.61924280669958,0.876767573733936,1.58115111178609,5.46246237917072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,1.98067203434441,0.646793418913773,0.857348140126369,0,0.535106452806212,0.329098041204242,0.304464949114599,0.469343416127421,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,6.21227026878773,4.14292712856459,5.15605962095457,2.57779773515531,2.74033007908257,4.5323633843382,4.72515750162264,3.60256962579376,3.62513927187364,3.10656187051092,1.55681021376265,2.79317411380722,2.21953687480374,0.972426868273176,1.88651846365184,1.65459157605013,0.888986911206461,0.412070114477788,0,1.01078884705519,0.760437899670719,0.754505365544305,1.03005658216871,1.02440243847791,0.976402972245426,0.476293691283074,1.27472758539341,0.77163688185482,0.412085900803307,1.17759136107518,0.685738504770831,1.06485483695602,0.715308569841963,0.581385666529314,1.41164070622996,0.507687647350059,0.548783918618318,0,0.543216455383447,1.68342681497322,0.830445126869219,1.37906275325789,0,2.16911577660352,0.385813221962283,2.74791635731741,0.701794825336225,1.28922632428979,0.191288332068843,0.220591419119515,0 | |||
|short_description=p6@Add2 | |||
}} |
Revision as of 10:49, 14 September 2013
Short description: | p6@Add2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Add2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 75bp_to_uc009crc.1, uc009crd.1, uc009cre.1, uc009crf.1_5end |
EntrezGene: | Add2 |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.02e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.02e-28 | 23 |
neuron | 7.02e-24 | 33 |
neuronal stem cell | 7.02e-24 | 33 |
neuroblast | 7.02e-24 | 33 |
electrically signaling cell | 7.02e-24 | 33 |
electrically responsive cell | 7.73e-19 | 39 |
electrically active cell | 7.73e-19 | 39 |
neural cell | 2.80e-16 | 43 |
ectodermal cell | 1.03e-15 | 44 |
neurectodermal cell | 1.03e-15 | 44 |
neuron of cerebral cortex | 1.83e-09 | 6 |
embryonic cell | 5.99e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.