FFCP PHASE1:Mm9::chr9:108957353..108957385,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66940|HGNC=|MCL_coexpression_id=1|UniProt=Q9D7I0|association_with_transcript=0bp_to_ENSMUST00000154184_5end|description=CAGE_peak_8_at_Shisa5_5end|id=chr9:108957353..108957385,+|ontology_enrichment_celltype=CL:0000221!2.30e-12!44;CL:0000133!2.30e-12!44;CL:0002319!3.72e-12!43;CL:0000117!7.82e-12!23;CL:0000337!7.82e-12!23;CL:0000540!6.69e-11!33;CL:0000047!6.69e-11!33;CL:0000031!6.69e-11!33;CL:0000404!6.69e-11!33;CL:0000055!1.14e-09!50;CL:0000393!6.57e-09!39;CL:0000211!6.57e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,9.17e-20,23;CL:0000337,9.17e-20,23;CL:0000540,7.49e-15,33;CL:0000047,7.49e-15,33;CL:0000031,7.49e-15,33;CL:0000404,7.49e-15,33;CL:0002319,2.37e-13,43;CL:0000221,7.77e-13,44;CL:0000133,7.77e-13,44;CL:0000393,2.75e-11,39;CL:0000211,2.75e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.06e-29!102;UBERON:0000924!5.06e-29!102;UBERON:0006601!5.06e-29!102;UBERON:0000073!6.44e-27!75;UBERON:0001016!6.44e-27!75;UBERON:0001017!1.66e-26!73;UBERON:0005743!1.66e-26!73;UBERON:0001049!9.97e-22!52;UBERON:0005068!9.97e-22!52;UBERON:0006241!9.97e-22!52;UBERON:0007135!9.97e-22!52;UBERON:0002346!1.23e-21!71;UBERON:0003075!1.23e-21!71;UBERON:0007284!1.23e-21!71;UBERON:0000955!7.96e-21!50;UBERON:0006238!7.96e-21!50;UBERON:0002616!3.39e-20!49;UBERON:0000033!4.45e-19!63;UBERON:0002020!7.16e-17!34;UBERON:0003080!3.30e-15!40;UBERON:0002780!1.51e-14!39;UBERON:0001890!1.51e-14!39;UBERON:0006240!1.51e-14!39;UBERON:0002791!5.27e-14!29;UBERON:0003528!5.27e-14!29;UBERON:0001893!5.27e-14!29;UBERON:0003056!2.14e-13!49;UBERON:0000956!1.73e-09!21;UBERON:0001869!1.73e-09!21;UBERON:0000203!1.73e-09!21;UBERON:0007811!2.80e-08!86;UBERON:0002619!1.23e-07!17;UBERON:0003076!2.60e-07!12;UBERON:0003057!2.60e-07!12;UBERON:0002021!5.98e-07!10;UBERON:0000411!5.98e-07!10;UBERON:0001950!5.98e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.76e-36,73;UBERON:0001016,3.07e-36,75;UBERON:0000073,1.42e-35,54;UBERON:0001049,4.75e-33,52;UBERON:0005068,4.75e-33,52;UBERON:0006241,4.75e-33,52;UBERON:0007135,4.75e-33,52;UBERON:0004121,1.35e-30,95;UBERON:0000924,1.35e-30,95;UBERON:0006601,1.35e-30,95;UBERON:0002346,6.38e-28,64;UBERON:0003075,6.38e-28,64;UBERON:0007284,6.38e-28,64;UBERON:0000955,6.38e-28,47;UBERON:0006238,6.38e-28,47;UBERON:0002020,1.88e-27,34;UBERON:0002616,6.58e-27,46;UBERON:0010371,5.94e-25,73;UBERON:0003080,2.62e-24,40;UBERON:0002780,3.37e-23,39;UBERON:0001890,3.37e-23,39;UBERON:0006240,3.37e-23,39;UBERON:0003528,1.31e-22,29;UBERON:0002791,1.31e-22,29;UBERON:0001893,1.31e-22,29;UBERON:0003056,2.60e-20,49;UBERON:0010314,1.07e-19,92;UBERON:0000956,5.41e-15,21;UBERON:0001869,5.41e-15,21;UBERON:0000203,5.41e-15,21;UBERON:0002619,6.97e-12,17;UBERON:0002021,1.23e-10,10;UBERON:0000411,1.23e-10,10;UBERON:0001950,1.23e-10,10;UBERON:0000025,6.21e-10,114;UBERON:0003076,5.84e-09,12;UBERON:0003057,5.84e-09,12;UBERON:0004111,6.78e-09,122;UBERON:0002420,7.16e-09,8;UBERON:0007245,7.16e-09,8;UBERON:0010009,7.16e-09,8;UBERON:0010011,7.16e-09,8;UBERON:0000454,7.16e-09,8;UBERON:0011216,7.83e-08,194;UBERON:0007023,3.66e-07,51;UBERON:0002240,4.01e-07,6;UBERON:0005174,4.01e-07,6;UBERON:0001137,4.01e-07,6|phase1_expression=0.960893082628764,0.348975407639361,0,0.60492842261366,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,1.44573593256819,0.496454756004426,0,0.639969691173627,1.14704640533585,0,1.7230479846363,0.430942465371778,0,1.51218077855958,0.886922042621219,1.27006134691926,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0.782391344348039,0.872100625521786,1.09843091367236,0.58328969722285,0.839918529752175,1.43752564364972,0.167782606057736,0,0.336093799142464,0.514518872071894,0.85960031981627,0.515672092277442,1.61853168687678,3.70293685490423,3.1691570175309,0.677689064138264,0.889294796111139,0,0,0.7104801149461,0.299600110518405,2.68952813725088,1.45165457231869,1.75507719831198,2.73422449756797,5.42736870367227,4.41737081903227,1.71487118900936,1.72521847832825,0,11.0115880999389,8.68273898979276,9.83081812839958,1.45074916503213,4.39140689291566,3.64639359389732,6.42120897703176,10.6924895906019,6.57032465440283,2.65165726926301,4.8406371471695,3.35519002485541,1.06016670666458,0.755715601067855,0,0,0.679971333707751,1.07940638327563,0,0,0.842666520790511,0.511290967734173,0,0,0.985903938436763,0,0,0,0.432982082022428,1.01343946190039,0,0.34255163915718,0,1.33597925158342,1.04091196059682,0.608930956624282,1.38369298353635,1.20578112442098,0.940709657085638,1.13099932196708,0.494389935468748,1.3013942122792,0,0.485300549842228,0,0.484875253135222,0,5.85561594023094,5.86450779077674,1.27728527604296,0,0,0.127070227073065,7.63932260964596,6.40500843946077,2.01046963380583,5.21472960576829,3.83573185995496,8.51930982694196,5.02947915510049,0.101839363850316,0.248813941220186,1.51633655060205,1.47309299120532,0,0,0.360124259610698,0.75352408917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| ||
|EntrezGene=66940 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q9D7I0 | |||
|association_with_transcript=0bp_to_ENSMUST00000154184_5end | |||
|description=CAGE_peak_8_at_Shisa5_5end | |||
|id=chr9:108957353..108957385,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.30e-12!44;CL:0000133!2.30e-12!44;CL:0002319!3.72e-12!43;CL:0000117!7.82e-12!23;CL:0000337!7.82e-12!23;CL:0000540!6.69e-11!33;CL:0000047!6.69e-11!33;CL:0000031!6.69e-11!33;CL:0000404!6.69e-11!33;CL:0000055!1.14e-09!50;CL:0000393!6.57e-09!39;CL:0000211!6.57e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.17e-20,23;CL:0000337,9.17e-20,23;CL:0000540,7.49e-15,33;CL:0000047,7.49e-15,33;CL:0000031,7.49e-15,33;CL:0000404,7.49e-15,33;CL:0002319,2.37e-13,43;CL:0000221,7.77e-13,44;CL:0000133,7.77e-13,44;CL:0000393,2.75e-11,39;CL:0000211,2.75e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.06e-29!102;UBERON:0000924!5.06e-29!102;UBERON:0006601!5.06e-29!102;UBERON:0000073!6.44e-27!75;UBERON:0001016!6.44e-27!75;UBERON:0001017!1.66e-26!73;UBERON:0005743!1.66e-26!73;UBERON:0001049!9.97e-22!52;UBERON:0005068!9.97e-22!52;UBERON:0006241!9.97e-22!52;UBERON:0007135!9.97e-22!52;UBERON:0002346!1.23e-21!71;UBERON:0003075!1.23e-21!71;UBERON:0007284!1.23e-21!71;UBERON:0000955!7.96e-21!50;UBERON:0006238!7.96e-21!50;UBERON:0002616!3.39e-20!49;UBERON:0000033!4.45e-19!63;UBERON:0002020!7.16e-17!34;UBERON:0003080!3.30e-15!40;UBERON:0002780!1.51e-14!39;UBERON:0001890!1.51e-14!39;UBERON:0006240!1.51e-14!39;UBERON:0002791!5.27e-14!29;UBERON:0003528!5.27e-14!29;UBERON:0001893!5.27e-14!29;UBERON:0003056!2.14e-13!49;UBERON:0000956!1.73e-09!21;UBERON:0001869!1.73e-09!21;UBERON:0000203!1.73e-09!21;UBERON:0007811!2.80e-08!86;UBERON:0002619!1.23e-07!17;UBERON:0003076!2.60e-07!12;UBERON:0003057!2.60e-07!12;UBERON:0002021!5.98e-07!10;UBERON:0000411!5.98e-07!10;UBERON:0001950!5.98e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.76e-36,73;UBERON:0001016,3.07e-36,75;UBERON:0000073,1.42e-35,54;UBERON:0001049,4.75e-33,52;UBERON:0005068,4.75e-33,52;UBERON:0006241,4.75e-33,52;UBERON:0007135,4.75e-33,52;UBERON:0004121,1.35e-30,95;UBERON:0000924,1.35e-30,95;UBERON:0006601,1.35e-30,95;UBERON:0002346,6.38e-28,64;UBERON:0003075,6.38e-28,64;UBERON:0007284,6.38e-28,64;UBERON:0000955,6.38e-28,47;UBERON:0006238,6.38e-28,47;UBERON:0002020,1.88e-27,34;UBERON:0002616,6.58e-27,46;UBERON:0010371,5.94e-25,73;UBERON:0003080,2.62e-24,40;UBERON:0002780,3.37e-23,39;UBERON:0001890,3.37e-23,39;UBERON:0006240,3.37e-23,39;UBERON:0003528,1.31e-22,29;UBERON:0002791,1.31e-22,29;UBERON:0001893,1.31e-22,29;UBERON:0003056,2.60e-20,49;UBERON:0010314,1.07e-19,92;UBERON:0000956,5.41e-15,21;UBERON:0001869,5.41e-15,21;UBERON:0000203,5.41e-15,21;UBERON:0002619,6.97e-12,17;UBERON:0002021,1.23e-10,10;UBERON:0000411,1.23e-10,10;UBERON:0001950,1.23e-10,10;UBERON:0000025,6.21e-10,114;UBERON:0003076,5.84e-09,12;UBERON:0003057,5.84e-09,12;UBERON:0004111,6.78e-09,122;UBERON:0002420,7.16e-09,8;UBERON:0007245,7.16e-09,8;UBERON:0010009,7.16e-09,8;UBERON:0010011,7.16e-09,8;UBERON:0000454,7.16e-09,8;UBERON:0011216,7.83e-08,194;UBERON:0007023,3.66e-07,51;UBERON:0002240,4.01e-07,6;UBERON:0005174,4.01e-07,6;UBERON:0001137,4.01e-07,6 | |||
|phase1_expression=0.960893082628764,0.348975407639361,0,0.60492842261366,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,1.44573593256819,0.496454756004426,0,0.639969691173627,1.14704640533585,0,1.7230479846363,0.430942465371778,0,1.51218077855958,0.886922042621219,1.27006134691926,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0.782391344348039,0.872100625521786,1.09843091367236,0.58328969722285,0.839918529752175,1.43752564364972,0.167782606057736,0,0.336093799142464,0.514518872071894,0.85960031981627,0.515672092277442,1.61853168687678,3.70293685490423,3.1691570175309,0.677689064138264,0.889294796111139,0,0,0.7104801149461,0.299600110518405,2.68952813725088,1.45165457231869,1.75507719831198,2.73422449756797,5.42736870367227,4.41737081903227,1.71487118900936,1.72521847832825,0,11.0115880999389,8.68273898979276,9.83081812839958,1.45074916503213,4.39140689291566,3.64639359389732,6.42120897703176,10.6924895906019,6.57032465440283,2.65165726926301,4.8406371471695,3.35519002485541,1.06016670666458,0.755715601067855,0,0,0.679971333707751,1.07940638327563,0,0,0.842666520790511,0.511290967734173,0,0,0.985903938436763,0,0,0,0.432982082022428,1.01343946190039,0,0.34255163915718,0,1.33597925158342,1.04091196059682,0.608930956624282,1.38369298353635,1.20578112442098,0.940709657085638,1.13099932196708,0.494389935468748,1.3013942122792,0,0.485300549842228,0,0.484875253135222,0,5.85561594023094,5.86450779077674,1.27728527604296,0,0,0.127070227073065,7.63932260964596,6.40500843946077,2.01046963380583,5.21472960576829,3.83573185995496,8.51930982694196,5.02947915510049,0.101839363850316,0.248813941220186,1.51633655060205,1.47309299120532,0,0,0.360124259610698,0.753524089178575,0.272145996605311,0.640568601424249,0.562210347358373,2.32833033665114,0,0.189106080167819,0.351902248327898,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0.621377317606506,1.17263029990548,0.36012412292203,0.710234206755631,0.393528463494808,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,6.30869845692382,2.46971069710283,1.98251269790279,1.32225283331772,0.213288250535234,0.464473343720877,0.257734922644187,0.605050573870028,0.889512175379481,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.994782360205754,0.19496408711912,0.898819408654221,1.29682829924817,0.597423819763102,0.569003702859245,0.342745537829186,0,0.407302655690628,0.193952487167626,0.210407459670956,0.505892296994058,0.590440591918409,0.941992367048249,0.246794327843601,0,0.166845105716094,0.393117990226406,0.449724224769707,0.608580364165509,0,0.50925170356284,0.575392274901621,0.162135226775035,0.274561413188081,0,0.744281895337007,0,1.01031551178845,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0.238043640886014,0,0.472905432318573,0,0.159454768657487,0,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,7.22477654945064,9.96299336033727,0,0,0.315508219416257,1.17131623288992,0.646270193198397,0.477937595905104,1.11399337041197,0.566153061577665,0.809621403349789,1.46127928955656,0,4.81981974632711,0.567760340833074,0.534196811001766,0,0.659880491890142,0,0,0,0.188605079755898,0.885905678642318,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0,0,1.03135543248187,1.70219802876894,0,0,0.643011105094777,0.886701168211368,1.07021290561242,1.15184314421485,2.43571959291679,0.469343416127421,1.48282449604674,0,1.6488625294148,0.484393280087717,0.965006798850494,0.954978752025092,1.47726809770555,0.291480836629851,8.52956389248344,0,0.206386867963223,0.370389054739423,0.941842285023455,0.956859594047176,0,0.339956859987711,0,0,1.90934123603023,0.158167996790568,0.813277868507395,0.324016022465404,0.209088296014469,0.218362563746178,0.539457385539283,0.247960367176008,0.26175594198403,0.129614973291793,1.24267862617385,0,0.149516546043979,0,0.388902376688095,0.645799117388655,0.675824501963113,0.58678619322877,0.2604087696879,0.629156066554265,0,0,0,0,0.102710957164827,0.129920822977795,0.537080087002444,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.228620419965,0.302478555410522,0.292373642219257,0,0.350630706544707,0.226730383615211,0,0,0,0.772758376128762,0.563047426353546,0.183151624267265,0.428736758158132,0,3.3885110557024,3.22227665555024,2.29158205375759,3.09335728218638,5.48066015816514,8.3093328712867,4.72515750162264,3.60256962579376,4.53142408984205,6.73088405277366,0,0.399024873401031,0.853668028770671,0.729320151204882,0.419226325255965,0.735374033800057,1.33348036680969,1.03017528619447,0.962757628775446,1.26348605881899,1.2673964994512,1.69763707247469,0.749132059759059,0.704276676453562,1.09127391015665,0.476293691283074,0.579421629724277,1.15745532278223,0,1.03039244094078,0.342869252385415,0.887379030796687,0.238436189947321,0.872078499793971,0.282328141245992,0.592302255241736,0.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| |||
|short_description=p8@Shisa5 | |||
}} |
Revision as of 16:52, 14 September 2013
Short description: | p8@Shisa5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Shisa5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000154184_5end |
EntrezGene: | Shisa5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.17e-20 | 23 |
neuroblast (sensu Vertebrata) | 9.17e-20 | 23 |
neuron | 7.49e-15 | 33 |
neuronal stem cell | 7.49e-15 | 33 |
neuroblast | 7.49e-15 | 33 |
electrically signaling cell | 7.49e-15 | 33 |
neural cell | 2.37e-13 | 43 |
ectodermal cell | 7.77e-13 | 44 |
neurectodermal cell | 7.77e-13 | 44 |
electrically responsive cell | 2.75e-11 | 39 |
electrically active cell | 2.75e-11 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.