FFCP PHASE1:Mm9::chrX:133372407..133372423,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=212|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:133372407..133372423,+|id=chrX:133372407..133372423,+|ontology_enrichment_celltype=CL:0000107!9.74e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,9.82e-11,33;CL:0000047,9.82e-11,33;CL:0000031,9.82e-11,33;CL:0000404,9.82e-11,33;CL:0002319,7.47e-10,43;CL:0000221,1.54e-09,44;CL:0000133,1.54e-09,44;CL:0000393,1.48e-08,39;CL:0000211,1.48e-08,39;CL:0002610,3.62e-08,3;CL:0002614,8.67e-08,3;CL:0000117,9.45e-08,23;CL:0000337,9.45e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.22e-17!102;UBERON:0000924!3.22e-17!102;UBERON:0006601!3.22e-17!102;UBERON:0000073!4.07e-16!75;UBERON:0001016!4.07e-16!75;UBERON:0001017!7.25e-15!73;UBERON:0005743!7.25e-15!73;UBERON:0002346!8.81e-13!71;UBERON:0003075!8.81e-13!71;UBERON:0007284!8.81e-13!71;UBERON:0000033!3.47e-10!63;UBERON:0001049!6.88e-10!52;UBERON:0005068!6.88e-10!52;UBERON:0006241!6.88e-10!52;UBERON:0007135!6.88e-10!52;UBERON:0002021!1.43e-09!10;UBERON:0000411!1.43e-09!10;UBERON:0001950!1.43e-09!10;UBERON:0000955!2.28e-09!50;UBERON:0006238!2.28e-09!50;UBERON:0002616!8.44e-09!49;UBERON:0002020!2.49e-08!34;UBERON:0000010!4.13e-08!11;UBERON:0002298!7.23e-07!6;UBERON:0002410!9.74e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.98e-36,75;UBERON:0001017,6.98e-33,73;UBERON:0000073,3.08e-30,54;UBERON:0004121,3.08e-28,95;UBERON:0000924,3.08e-28,95;UBERON:0006601,3.08e-28,95;UBERON:0001049,1.26e-26,52;UBERON:0005068,1.26e-26,52;UBERON:0006241,1.26e-26,52;UBERON:0007135,1.26e-26,52;UBERON:0002346,1.55e-25,64;UBERON:0003075,1.55e-25,64;UBERON:0007284,1.55e-25,64;UBERON:0000955,1.67e-21,47;UBERON:0006238,1.67e-21,47;UBERON:0010371,1.87e-21,73;UBERON:0002020,1.57e-20,34;UBERON:0002021,3.35e-20,10;UBERON:0000411,3.35e-20,10;UBERON:0001950,3.35e-20,10;UBERON:0002616,4.11e-20,46;UBERON:0003528,1.01e-15,29;UBERON:0002791,1.01e-15,29;UBERON:0001893,1.01e-15,29;UBERON:0003080,1.76e-15,40;UBERON:0010314,1.82e-15,92;UBERON:0002780,3.97e-14,39;UBERON:0001890,3.97e-14,39;UBERON:0006240,3.97e-14,39;UBERON:0002619,2.88e-13,17;UBERON:0003056,3.01e-13,49;UBERON:0003076,8.09e-13,12;UBERON:0003057,8.09e-13,12;UBERON:0000956,3.04e-12,21;UBERON:0001869,3.04e-12,21;UBERON:0000203,3.04e-12,21;UBERON:0002950,1.07e-09,4;UBERON:0001891,1.07e-09,4;UBERON:0009616,1.07e-09,4;UBERON:0010286,1.07e-09,4;UBERON:0011216,3.07e-09,194;UBERON:0000025,2.13e-08,114;UBERON:0002240,2.67e-08,6;UBERON:0005174,2.67e-08,6;UBERON:0001137,2.67e-08,6;UBERON:0004684,3.62e-08,3;UBERON:0002275,3.62e-08,3;UBERON:0002038,8.67e-08,3;UBERON:0009663,8.67e-08,3;UBERON:0009661,8.67e-08,3;UBERON:0000125,8.67e-08,3;UBERON:0002308,8.67e-08,3;UBERON:0004111,2.05e-07,122;UBERON:0000010,2.88e-07,11|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,4.57041575046086,3.3130281142742,0,0,0,66.0695285996332,67.6742891851495,105.066868747271,0,0,0,27.9182999001381,21.3849791812038,79.3022905961644,12.0797720044204,4.27115042397309,0.186399445825301,4.92220256665696,4.60986516651392,0,0,0,0,0,0,0.561777680527007,0,0,0,0.845060518660083,0,0,0,0,0,0,0.45673551887624,0,0,0,0.304465478312141,0.461230994512117,0.60289056221049,0.823120949949934,0,0,0,0,0.647067399789637,0,0,1.86391761218122,5.27005434620785,16.546289838263,0,0,0,0,19.0234112044125,18.3000241127451,0.251308704225729,5.9100268865374,16.6215047264715,20.9865925005156,48.8346201833951,0.203678727700633,0,0,0.631325567659422,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,12.6764651662118,0.215567992932842,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0,0,0,0,6.72927835405207,0,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,28.4174544278392,71.3819171346517,0,0.252470927204373,1.26203287766503,0.390438744296638,3.66219776145758,0.716906393857656,1.55959071857676,1.13230612315533,0.809621403349789,2.92255857911312,0.790575555893047,8.03303291054518,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.358117032009409,0,0.291480836629851,43.2040953684488,0,0,0,0.565105371014073,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0.506868376472335,0.234714477291508,0.3906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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=212 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:133372407..133372423,+ | |||
|id=chrX:133372407..133372423,+ | |||
|ontology_enrichment_celltype=CL:0000107!9.74e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.82e-11,33;CL:0000047,9.82e-11,33;CL:0000031,9.82e-11,33;CL:0000404,9.82e-11,33;CL:0002319,7.47e-10,43;CL:0000221,1.54e-09,44;CL:0000133,1.54e-09,44;CL:0000393,1.48e-08,39;CL:0000211,1.48e-08,39;CL:0002610,3.62e-08,3;CL:0002614,8.67e-08,3;CL:0000117,9.45e-08,23;CL:0000337,9.45e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.22e-17!102;UBERON:0000924!3.22e-17!102;UBERON:0006601!3.22e-17!102;UBERON:0000073!4.07e-16!75;UBERON:0001016!4.07e-16!75;UBERON:0001017!7.25e-15!73;UBERON:0005743!7.25e-15!73;UBERON:0002346!8.81e-13!71;UBERON:0003075!8.81e-13!71;UBERON:0007284!8.81e-13!71;UBERON:0000033!3.47e-10!63;UBERON:0001049!6.88e-10!52;UBERON:0005068!6.88e-10!52;UBERON:0006241!6.88e-10!52;UBERON:0007135!6.88e-10!52;UBERON:0002021!1.43e-09!10;UBERON:0000411!1.43e-09!10;UBERON:0001950!1.43e-09!10;UBERON:0000955!2.28e-09!50;UBERON:0006238!2.28e-09!50;UBERON:0002616!8.44e-09!49;UBERON:0002020!2.49e-08!34;UBERON:0000010!4.13e-08!11;UBERON:0002298!7.23e-07!6;UBERON:0002410!9.74e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.98e-36,75;UBERON:0001017,6.98e-33,73;UBERON:0000073,3.08e-30,54;UBERON:0004121,3.08e-28,95;UBERON:0000924,3.08e-28,95;UBERON:0006601,3.08e-28,95;UBERON:0001049,1.26e-26,52;UBERON:0005068,1.26e-26,52;UBERON:0006241,1.26e-26,52;UBERON:0007135,1.26e-26,52;UBERON:0002346,1.55e-25,64;UBERON:0003075,1.55e-25,64;UBERON:0007284,1.55e-25,64;UBERON:0000955,1.67e-21,47;UBERON:0006238,1.67e-21,47;UBERON:0010371,1.87e-21,73;UBERON:0002020,1.57e-20,34;UBERON:0002021,3.35e-20,10;UBERON:0000411,3.35e-20,10;UBERON:0001950,3.35e-20,10;UBERON:0002616,4.11e-20,46;UBERON:0003528,1.01e-15,29;UBERON:0002791,1.01e-15,29;UBERON:0001893,1.01e-15,29;UBERON:0003080,1.76e-15,40;UBERON:0010314,1.82e-15,92;UBERON:0002780,3.97e-14,39;UBERON:0001890,3.97e-14,39;UBERON:0006240,3.97e-14,39;UBERON:0002619,2.88e-13,17;UBERON:0003056,3.01e-13,49;UBERON:0003076,8.09e-13,12;UBERON:0003057,8.09e-13,12;UBERON:0000956,3.04e-12,21;UBERON:0001869,3.04e-12,21;UBERON:0000203,3.04e-12,21;UBERON:0002950,1.07e-09,4;UBERON:0001891,1.07e-09,4;UBERON:0009616,1.07e-09,4;UBERON:0010286,1.07e-09,4;UBERON:0011216,3.07e-09,194;UBERON:0000025,2.13e-08,114;UBERON:0002240,2.67e-08,6;UBERON:0005174,2.67e-08,6;UBERON:0001137,2.67e-08,6;UBERON:0004684,3.62e-08,3;UBERON:0002275,3.62e-08,3;UBERON:0002038,8.67e-08,3;UBERON:0009663,8.67e-08,3;UBERON:0009661,8.67e-08,3;UBERON:0000125,8.67e-08,3;UBERON:0002308,8.67e-08,3;UBERON:0004111,2.05e-07,122;UBERON:0000010,2.88e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,4.57041575046086,3.3130281142742,0,0,0,66.0695285996332,67.6742891851495,105.066868747271,0,0,0,27.9182999001381,21.3849791812038,79.3022905961644,12.0797720044204,4.27115042397309,0.186399445825301,4.92220256665696,4.60986516651392,0,0,0,0,0,0,0.561777680527007,0,0,0,0.845060518660083,0,0,0,0,0,0,0.45673551887624,0,0,0,0.304465478312141,0.461230994512117,0.60289056221049,0.823120949949934,0,0,0,0,0.647067399789637,0,0,1.86391761218122,5.27005434620785,16.546289838263,0,0,0,0,19.0234112044125,18.3000241127451,0.251308704225729,5.9100268865374,16.6215047264715,20.9865925005156,48.8346201833951,0.203678727700633,0,0,0.631325567659422,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,12.6764651662118,0.215567992932842,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0,0,0,0,6.72927835405207,0,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,28.4174544278392,71.3819171346517,0,0.252470927204373,1.26203287766503,0.390438744296638,3.66219776145758,0.716906393857656,1.55959071857676,1.13230612315533,0.809621403349789,2.92255857911312,0.790575555893047,8.03303291054518,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.358117032009409,0,0.291480836629851,43.2040953684488,0,0,0,0.565105371014073,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0.506868376472335,0.234714477291508,0.39061315453185,0,0.483168241652012,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,41.2268845110459,27.6195141904306,36.092417346682,17.8727309637435,9.59115527678899,24.9279986138601,9.45031500324528,9.00642406448441,7.25027854374727,7.24864436452548,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.789209134313529,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0.382576664137687,0.220591419119515,1.39120701372253 | |||
|short_description=p@chrX:133372407..133372423,+ | |||
}} |
Revision as of 19:21, 14 September 2013
Short description: | p@chrX:133372407..133372423, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:133372407..133372423, + |
Coexpression cluster: | MCL_coexpression_mm9:212 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.82e-11 | 33 |
neuronal stem cell | 9.82e-11 | 33 |
neuroblast | 9.82e-11 | 33 |
electrically signaling cell | 9.82e-11 | 33 |
neural cell | 7.47e-10 | 43 |
ectodermal cell | 1.54e-09 | 44 |
neurectodermal cell | 1.54e-09 | 44 |
electrically responsive cell | 1.48e-08 | 39 |
electrically active cell | 1.48e-08 | 39 |
raphe nuclei neuron | 3.62e-08 | 3 |
neuron of the substantia nigra | 8.67e-08 | 3 |
CNS neuron (sensu Vertebrata) | 9.45e-08 | 23 |
neuroblast (sensu Vertebrata) | 9.45e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.