FFCP PHASE1:Mm9::chrX:7499446..7499477,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=980|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:7499446..7499477,+|id=chrX:7499446..7499477,+|ontology_enrichment_celltype=CL:0000117!2.11e-12!23;CL:0000337!2.11e-12!23;CL:0000540!4.30e-09!33;CL:0000047!4.30e-09!33;CL:0000031!4.30e-09!33;CL:0000404!4.30e-09!33;CL:0002319!2.27e-08!43;CL:0000221!5.62e-08!44;CL:0000133!5.62e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,7.76e-12,23;CL:0000337,7.76e-12,23;CL:0000349,8.00e-08,3;CL:0000351,8.00e-08,3;CL:0000540,2.38e-07,33;CL:0000047,2.38e-07,33;CL:0000031,2.38e-07,33;CL:0000404,2.38e-07,33;CL:0002610,2.95e-07,3;CL:0002319,4.45e-07,43;CL:0002614,5.40e-07,3;CL:0000221,7.69e-07,44;CL:0000133,7.69e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.81e-29!73;UBERON:0005743!3.81e-29!73;UBERON:0000073!9.37e-28!75;UBERON:0001016!9.37e-28!75;UBERON:0002346!9.12e-26!71;UBERON:0003075!9.12e-26!71;UBERON:0007284!9.12e-26!71;UBERON:0001049!1.12e-25!52;UBERON:0005068!1.12e-25!52;UBERON:0006241!1.12e-25!52;UBERON:0007135!1.12e-25!52;UBERON:0000955!1.88e-24!50;UBERON:0006238!1.88e-24!50;UBERON:0002616!8.63e-24!49;UBERON:0004121!8.84e-24!102;UBERON:0000924!8.84e-24!102;UBERON:0006601!8.84e-24!102;UBERON:0000033!2.89e-19!63;UBERON:0003080!4.54e-18!40;UBERON:0002780!2.50e-17!39;UBERON:0001890!2.50e-17!39;UBERON:0006240!2.50e-17!39;UBERON:0002020!2.43e-16!34;UBERON:0003056!1.14e-15!49;UBERON:0002791!6.24e-13!29;UBERON:0003528!6.24e-13!29;UBERON:0001893!6.24e-13!29;UBERON:0007811!3.01e-10!86;UBERON:0002021!8.51e-09!10;UBERON:0000411!8.51e-09!10;UBERON:0001950!8.51e-09!10;UBERON:0003076!3.25e-08!12;UBERON:0003057!3.25e-08!12;UBERON:0000153!4.20e-08!94;UBERON:0000956!4.28e-08!21;UBERON:0001869!4.28e-08!21;UBERON:0000203!4.28e-08!21;UBERON:0002619!1.39e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.36e-24,73;UBERON:0001016,1.76e-23,75;UBERON:0000073,7.09e-23,54;UBERON:0001049,5.73e-20,52;UBERON:0005068,5.73e-20,52;UBERON:0006241,5.73e-20,52;UBERON:0007135,5.73e-20,52;UBERON:0004121,9.02e-17,95;UBERON:0000924,9.02e-17,95;UBERON:0006601,9.02e-17,95;UBERON:0002346,5.68e-15,64;UBERON:0003075,5.68e-15,64;UBERON:0007284,5.68e-15,64;UBERON:0002020,2.19e-14,34;UBERON:0002616,2.75e-14,46;UBERON:0002021,2.85e-14,10;UBERON:0000411,2.85e-14,10;UBERON:0001950,2.85e-14,10;UBERON:0000955,7.22e-14,47;UBERON:0006238,7.22e-14,47;UBERON:0010371,2.56e-12,73;UBERON:0003080,5.86e-12,40;UBERON:0002780,6.59e-11,39;UBERON:0001890,6.59e-11,39;UBERON:0006240,6.59e-11,39;UBERON:0003528,3.72e-10,29;UBERON:0002791,3.72e-10,29;UBERON:0001893,3.72e-10,29;UBERON:0003076,1.42e-09,12;UBERON:0003057,1.42e-09,12;UBERON:0002619,1.87e-09,17;UBERON:0010314,2.80e-09,92;UBERON:0003056,5.93e-09,49;UBERON:0002950,1.66e-08,4;UBERON:0001891,1.66e-08,4;UBERON:0009616,1.66e-08,4;UBERON:0010286,1.66e-08,4;UBERON:0002240,4.34e-08,6;UBERON:0005174,4.34e-08,6;UBERON:0001137,4.34e-08,6;UBERON:0000358,8.00e-08,3;UBERON:0000307,8.00e-08,3;UBERON:0007010,8.00e-08,3;UBERON:0000956,2.84e-07,21;UBERON:0001869,2.84e-07,21;UBERON:0000203,2.84e-07,21;UBERON:0004684,2.95e-07,3;UBERON:0002275,2.95e-07,3;UBERON:0002038,5.40e-07,3;UBERON:0009663,5.40e-07,3;UBERON:0009661,5.40e-07,3;UBERON:0000125,5.40e-07,3;UBERON:0002308,5.40e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,1.26766280701236,0,0,0,0,0,2.39680088414724,5.37905627450176,0.207379224616955,0.405017814995072,0,1.99955689082663,1.76694832761291,0.244981598429908,0.0958454710182364,0,11.0115880999389,2.55374676170375,3.07213066512487,0.527545150920775,0.640413505216868,0.52091337055676,2.79182999001381,2.8138130501584,3.36156145108982,1.47314292736834,3.41692033917847,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,0.346970653532272,0,0.230615497256059,0.60289056221049,0.23517741427141,0.376999773989026,0.494389935468748,0,0,0,0,0,0,0.878342391034642,4.60782754989601,0,0,0,0,1.79748767285787,2.28750301409313,0.251308704225729,0.695297280769106,1.53429274398198,5.61027720310812,0.973447578406546,0.101839363850316,0,1.26361379216837,0,0,0,0,0.30140963567143,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.720332286654991,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53211297973142,1.64096361229084,0,0,0.315508219416257,0,0.646270193198397,0,0,0,0,0.584511715822624,0,0.963963949265421,0,1.24645922567079,0.488660878060728,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.3160367579358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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=980 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:7499446..7499477,+ | |||
|id=chrX:7499446..7499477,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.11e-12!23;CL:0000337!2.11e-12!23;CL:0000540!4.30e-09!33;CL:0000047!4.30e-09!33;CL:0000031!4.30e-09!33;CL:0000404!4.30e-09!33;CL:0002319!2.27e-08!43;CL:0000221!5.62e-08!44;CL:0000133!5.62e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.76e-12,23;CL:0000337,7.76e-12,23;CL:0000349,8.00e-08,3;CL:0000351,8.00e-08,3;CL:0000540,2.38e-07,33;CL:0000047,2.38e-07,33;CL:0000031,2.38e-07,33;CL:0000404,2.38e-07,33;CL:0002610,2.95e-07,3;CL:0002319,4.45e-07,43;CL:0002614,5.40e-07,3;CL:0000221,7.69e-07,44;CL:0000133,7.69e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.81e-29!73;UBERON:0005743!3.81e-29!73;UBERON:0000073!9.37e-28!75;UBERON:0001016!9.37e-28!75;UBERON:0002346!9.12e-26!71;UBERON:0003075!9.12e-26!71;UBERON:0007284!9.12e-26!71;UBERON:0001049!1.12e-25!52;UBERON:0005068!1.12e-25!52;UBERON:0006241!1.12e-25!52;UBERON:0007135!1.12e-25!52;UBERON:0000955!1.88e-24!50;UBERON:0006238!1.88e-24!50;UBERON:0002616!8.63e-24!49;UBERON:0004121!8.84e-24!102;UBERON:0000924!8.84e-24!102;UBERON:0006601!8.84e-24!102;UBERON:0000033!2.89e-19!63;UBERON:0003080!4.54e-18!40;UBERON:0002780!2.50e-17!39;UBERON:0001890!2.50e-17!39;UBERON:0006240!2.50e-17!39;UBERON:0002020!2.43e-16!34;UBERON:0003056!1.14e-15!49;UBERON:0002791!6.24e-13!29;UBERON:0003528!6.24e-13!29;UBERON:0001893!6.24e-13!29;UBERON:0007811!3.01e-10!86;UBERON:0002021!8.51e-09!10;UBERON:0000411!8.51e-09!10;UBERON:0001950!8.51e-09!10;UBERON:0003076!3.25e-08!12;UBERON:0003057!3.25e-08!12;UBERON:0000153!4.20e-08!94;UBERON:0000956!4.28e-08!21;UBERON:0001869!4.28e-08!21;UBERON:0000203!4.28e-08!21;UBERON:0002619!1.39e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.36e-24,73;UBERON:0001016,1.76e-23,75;UBERON:0000073,7.09e-23,54;UBERON:0001049,5.73e-20,52;UBERON:0005068,5.73e-20,52;UBERON:0006241,5.73e-20,52;UBERON:0007135,5.73e-20,52;UBERON:0004121,9.02e-17,95;UBERON:0000924,9.02e-17,95;UBERON:0006601,9.02e-17,95;UBERON:0002346,5.68e-15,64;UBERON:0003075,5.68e-15,64;UBERON:0007284,5.68e-15,64;UBERON:0002020,2.19e-14,34;UBERON:0002616,2.75e-14,46;UBERON:0002021,2.85e-14,10;UBERON:0000411,2.85e-14,10;UBERON:0001950,2.85e-14,10;UBERON:0000955,7.22e-14,47;UBERON:0006238,7.22e-14,47;UBERON:0010371,2.56e-12,73;UBERON:0003080,5.86e-12,40;UBERON:0002780,6.59e-11,39;UBERON:0001890,6.59e-11,39;UBERON:0006240,6.59e-11,39;UBERON:0003528,3.72e-10,29;UBERON:0002791,3.72e-10,29;UBERON:0001893,3.72e-10,29;UBERON:0003076,1.42e-09,12;UBERON:0003057,1.42e-09,12;UBERON:0002619,1.87e-09,17;UBERON:0010314,2.80e-09,92;UBERON:0003056,5.93e-09,49;UBERON:0002950,1.66e-08,4;UBERON:0001891,1.66e-08,4;UBERON:0009616,1.66e-08,4;UBERON:0010286,1.66e-08,4;UBERON:0002240,4.34e-08,6;UBERON:0005174,4.34e-08,6;UBERON:0001137,4.34e-08,6;UBERON:0000358,8.00e-08,3;UBERON:0000307,8.00e-08,3;UBERON:0007010,8.00e-08,3;UBERON:0000956,2.84e-07,21;UBERON:0001869,2.84e-07,21;UBERON:0000203,2.84e-07,21;UBERON:0004684,2.95e-07,3;UBERON:0002275,2.95e-07,3;UBERON:0002038,5.40e-07,3;UBERON:0009663,5.40e-07,3;UBERON:0009661,5.40e-07,3;UBERON:0000125,5.40e-07,3;UBERON:0002308,5.40e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,1.26766280701236,0,0,0,0,0,2.39680088414724,5.37905627450176,0.207379224616955,0.405017814995072,0,1.99955689082663,1.76694832761291,0.244981598429908,0.0958454710182364,0,11.0115880999389,2.55374676170375,3.07213066512487,0.527545150920775,0.640413505216868,0.52091337055676,2.79182999001381,2.8138130501584,3.36156145108982,1.47314292736834,3.41692033917847,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,0.346970653532272,0,0.230615497256059,0.60289056221049,0.23517741427141,0.376999773989026,0.494389935468748,0,0,0,0,0,0,0.878342391034642,4.60782754989601,0,0,0,0,1.79748767285787,2.28750301409313,0.251308704225729,0.695297280769106,1.53429274398198,5.61027720310812,0.973447578406546,0.101839363850316,0,1.26361379216837,0,0,0,0,0.30140963567143,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.720332286654991,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53211297973142,1.64096361229084,0,0,0.315508219416257,0,0.646270193198397,0,0,0,0,0.584511715822624,0,0.963963949265421,0,1.24645922567079,0.488660878060728,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,4.08527526904546,0,0.129358683782755,0.214337035031592,0.532020700926821,0.535106452806212,0.493647061806363,3.04464949114599,1.64270195644597,2.54198485036584,0.220528398054962,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,1.69107881605257,0,0,0,0,0,0.234714477291508,0.39061315453185,2.9360616439199,0.724752362478018,1.15212002503146,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,7.5475224147182,7.35653624197701,7.05115388729129,0,0,0,0.214368379079066,0,0.564751842617067,2.30162618253588,2.29158205375759,2.06223818812425,1.37016503954128,3.0215755895588,4.05013500139084,1.80128481289688,1.35942722695261,2.07104124700728,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0.412070114477788,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.290692833264657,0,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0.749431733813838,0.233931608445408,0.429742108096597,0.57386499620653,0,0.231867835620421 | |||
|short_description=p@chrX:7499446..7499477,+ | |||
}} |
Revision as of 20:10, 14 September 2013
Short description: | p@chrX:7499446..7499477, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:7499446..7499477, + |
Coexpression cluster: | MCL_coexpression_mm9:980 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.76e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.76e-12 | 23 |
extraembryonic cell | 8.00e-08 | 3 |
trophoblast cell | 8.00e-08 | 3 |
neuron | 2.38e-07 | 33 |
neuronal stem cell | 2.38e-07 | 33 |
neuroblast | 2.38e-07 | 33 |
electrically signaling cell | 2.38e-07 | 33 |
raphe nuclei neuron | 2.95e-07 | 3 |
neural cell | 4.45e-07 | 43 |
neuron of the substantia nigra | 5.40e-07 | 3 |
ectodermal cell | 7.69e-07 | 44 |
neurectodermal cell | 7.69e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.