FFCP PHASE1:Hg19::chr11:35547154..35547191,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25891 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24554 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UXH9 | |||
|association_with_transcript=0bp_to_ENST00000278360,NM_001001991,NM_015430,uc001mwf.2,uc001mwg.2,uc010rew.1_5end | |||
|coexpression_cluster_id=C3150 | |||
|description=CAGE_peak_1_at_PAMR1_5end | |||
|id=chr11:35547154..35547191,- | |||
|ontology_enrichment_celltype=CL:0000055!3.97e-38!180;CL:0000057!1.08e-25!75;CL:0000680!4.71e-18!57;CL:0000056!4.71e-18!57;CL:0000355!4.71e-18!57;CL:0000183!5.42e-18!59;CL:0000187!9.71e-18!54;CL:0000393!6.61e-16!60;CL:0000211!6.61e-16!60;CL:0000192!5.50e-14!42;CL:0000514!5.50e-14!42;CL:0002620!4.54e-10!23;CL:0000359!8.03e-09!32;CL:0002334!4.05e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000057;1.76e-11;73!CL:0000192;8.79e-11;43!CL:0002620;1.28e-10;23!CL:0000187;1.97e-10;55!CL:0000393;4.85e-09;61!CL:0000211;4.85e-09;61!CL:0000359;1.31e-08;32!CL:0000134;3.44e-08;55!CL:0002320;1.04e-07;188!CL:0000723;1.46e-07;61!CL:0002334;2.01e-07;12!CL:0000048;4.28e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.46e-28,76;CL:0000680,4.64e-19,58;CL:0000056,4.64e-19,58;CL:0000355,4.64e-19,58;CL:0000187,1.01e-18,55;CL:0000393,4.24e-16,61;CL:0000211,4.24e-16,61;CL:0000192,9.37e-15,43;CL:0000514,9.37e-15,43;CL:0002620,1.26e-10,23;CL:0000359,6.03e-09,32;CL:0002334,1.98e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;8.79e-11;43!CL:0000355;2.14e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.18e-24!83;UBERON:0002329!4.18e-24!83;UBERON:0003077!4.18e-24!83;UBERON:0003059!4.18e-24!83;UBERON:0007282!4.18e-24!83;UBERON:0009618!4.18e-24!83;UBERON:0007285!4.18e-24!83;UBERON:0000475!1.74e-22!365;UBERON:0004290!1.11e-20!70;UBERON:0000486!7.64e-19!82;UBERON:0000481!1.12e-18!347;UBERON:0002385!5.16e-18!63;UBERON:0001015!5.16e-18!63;UBERON:0000383!5.16e-18!63;UBERON:0001134!9.51e-18!61;UBERON:0002036!9.51e-18!61;UBERON:0003082!9.51e-18!61;UBERON:0000119!6.92e-15!312;UBERON:0005256!2.78e-14!143;UBERON:0000468!3.12e-14!659;UBERON:0000483!5.91e-14!309;UBERON:0003102!8.89e-12!95;UBERON:0000033!1.36e-10!123;UBERON:0000153!3.28e-10!129;UBERON:0007811!3.28e-10!129;UBERON:0000467!4.77e-10!625;UBERON:0000477!6.40e-10!286;UBERON:0000480!7.33e-10!626;UBERON:0002100!2.00e-08!216;UBERON:0007100!2.24e-08!27;UBERON:0004121!2.81e-08!169;UBERON:0000922!3.10e-08!612;UBERON:0002616!4.02e-08!59;UBERON:0000948!4.43e-08!24;UBERON:0005498!4.43e-08!24;UBERON:0004140!4.43e-08!24;UBERON:0009881!4.43e-08!24;UBERON:0004141!4.43e-08!24;UBERON:0003084!4.43e-08!24;UBERON:0007005!4.43e-08!24;UBERON:0004139!4.43e-08!24;UBERON:0004291!4.43e-08!24;UBERON:0003075!4.44e-08!86;UBERON:0007284!4.44e-08!86;UBERON:0000479!4.54e-08!787;UBERON:0004111!6.22e-08!241;UBERON:0000924!7.32e-08!173;UBERON:0006601!7.32e-08!173;UBERON:0007023!1.87e-07!115;UBERON:0002346!1.93e-07!90;UBERON:0002199!2.02e-07!45;UBERON:0002416!2.02e-07!45;UBERON:0002050!2.18e-07!605;UBERON:0005423!2.18e-07!605;UBERON:0004872!3.70e-07!84;UBERON:0000923!3.72e-07!604;UBERON:0005291!3.72e-07!604;UBERON:0006598!3.72e-07!604;UBERON:0002532!3.72e-07!604;UBERON:0001135!5.39e-07!15;UBERON:0001049!7.03e-07!57;UBERON:0005068!7.03e-07!57;UBERON:0006241!7.03e-07!57;UBERON:0007135!7.03e-07!57;UBERON:0000490!9.43e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.74e-09;31!UBERON:0001015;2.74e-09;31!UBERON:0000383;2.74e-09;31!UBERON:0007100;4.53e-08;25!UBERON:0002384;5.37e-08;198!UBERON:0000948;9.16e-08;22!UBERON:0001135;2.70e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.28e-22,73;UBERON:0003077,5.54e-22,72;UBERON:0007285,5.54e-22,72;UBERON:0002329,6.45e-22,71;UBERON:0003059,6.45e-22,71;UBERON:0007282,6.45e-22,71;UBERON:0004290,6.45e-22,71;UBERON:0009618,6.45e-22,71;UBERON:0002385,4.24e-19,64;UBERON:0001015,4.24e-19,64;UBERON:0000383,4.24e-19,64;UBERON:0000486,5.10e-19,83;UBERON:0001134,8.11e-19,62;UBERON:0002036,8.11e-19,62;UBERON:0003082,8.11e-19,62;UBERON:0007503,1.38e-18,78;UBERON:0005256,1.26e-14,122;UBERON:0000119,8.25e-14,309;UBERON:0010314,1.10e-13,132;UBERON:0000483,6.90e-13,306;UBERON:0003104,9.66e-13,160;UBERON:0009142,9.66e-13,160;UBERON:0000479,1.19e-10,773;UBERON:0003102,2.14e-10,99;UBERON:0000490,6.32e-09,148;UBERON:0007100,7.99e-09,27;UBERON:0000948,1.63e-08,24;UBERON:0005498,1.63e-08,24;UBERON:0004140,1.63e-08,24;UBERON:0009881,1.63e-08,24;UBERON:0004141,1.63e-08,24;UBERON:0003084,1.63e-08,24;UBERON:0007005,1.63e-08,24;UBERON:0004139,1.63e-08,24;UBERON:0004291,1.63e-08,24;UBERON:0000923,3.67e-08,560;UBERON:0010316,3.67e-08,560;UBERON:0005291,3.67e-08,560;UBERON:0006598,3.67e-08,560;UBERON:0010317,3.67e-08,560;UBERON:0002532,3.67e-08,560;UBERON:0002050,3.86e-08,564;UBERON:0002199,4.91e-08,46;UBERON:0002416,4.91e-08,46;UBERON:0007023,2.17e-07,114;UBERON:0001135,2.67e-07,15;UBERON:0004872,2.93e-07,83;UBERON:0003075,4.27e-07,82;UBERON:0007284,4.27e-07,82;UBERON:0002097,5.57e-07,41;UBERON:0004111,6.58e-07,240 | |||
|phase1_expression=7.81217030863394,4.71021152560163,10.8534891153898,7.00513088471913,2.23480547213644,11.3404008133048,0,72.0160655706587,12.7980957817921,2.45733936501509,0,0,0,193.694342382473,177.628993390163,33.6162573225888,41.5859224336544,31.403333886657,34.1552959153355,7.26414242653049,5.91602004608334,25.7032871612032,5.43848375549008,1.23186982565596,6.40267461933494,0,0,0,0,0,0,0,0.6024118375565,2.9580320813343,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.7613732627923,73.7770945674,45.2633468926097,18.0719576192283,33.0883021019687,20.8578987303586,1.5905718941022,7.29952305453954,0.661743720148475,0.886917589850256,0.351339142772504,9.43049343583531,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,12.0432843314857,0,0,0,0,0,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,4.36094052142534,35.7819805220629,6.71141711822273,81.8288737425692,123.052910301241,22.6987764606949,23.5484592059769,7.47242970107935,1.72667283892012,129.152579690903,10.9115644376447,23.2115902421111,106.252914206742,53.5843609766399,223.542645969442,120.493789656504,39.9330275081115,143.321284649177,22.6648582382466,25.4140522657967,19.6631129383148,145.970232447249,42.2550051552482,131.430393655574,29.7000714320513,32.1447008062124,40.9572612872112,68.2687234725426,102.011685056164,48.921341269938,52.0880537110264,6.14568669233173,26.3579504387157,36.6580863732096,8.16711718752151,35.8779271377724,35.8776413215193,22.8886453252327,108.032794590385,44.2095350432903,60.8031674507685,37.223371266318,147.004185382143,35.9542549044823,35.5931621684201,16.1087322624024,76.7818769889357,66.0317842080903,12.3925080819998,21.3646346311214,0.966304265816484,1.90922284413584,0.573609190778008,7.19644866164613,12.5903279905411,8.01738205799677,7.98190123618352,6.30802127189071,8.02950189966826,10.9514672630871,6.43240938192885,5.52539685409922,41.7931135228781,108.281922250438,0,0.168584690078102,0,0,0,0,0,0,0,0,1.40241773803446,46.5078632804482,61.7436587819276,1.26755034821831,0.982827216677626,8.27105869353966,0,0.122988438543114,24.0194934417936,5.26801369961403,3.37205259772859,0.402115889646523,2.4998880192803,144.333079252474,99.8337393868395,7.21656710126366,0.34779121492523,27.4736344511823,0.288732895522148,0,0,0,0,0,0,0.148631162288728,0.93733833986777,1.34385702559088,0.992425680696705,2.5971971583826,0.581267877027924,0.766765358330422,0,0,0.414656231081544,0.144119953416961,0.37872730027914,0.952468414382536,0,7.03304683260282,6.84289784090821,1.7480673759565,0,0.571652865261156,33.9757185566443,102.886576244654,27.7218720403191,40.4620470321844,39.3422090437071,18.596660556232,239.344304926383,111.287957495162,23.4058710578549,4.25547396069835,20.2480856052236,36.1734323955113,10.8524321078289,3.29296134712308,22.8015329005615,40.1592902079077,1.58390374586686,13.2633325906218,0.871533458600294,6.09835246210548,0,0,0,1.4377491329495,1.14861935834114,1.42636905040718,30.1145117868565,9.24643451476725,1.61154866915906,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0,0,0,0,81.8352249766663,76.0259192010709,136.446306920967,18.5094066762418,13.7390321373815,25.7054936505314,17.2197880039288,49.6561064550736,38.6592756895174,18.6251528326509,4.64957918974806,9.58719676416856,87.8393342272318,69.7052120567356,65.5403939478735,0,0,0,0,1.66435439510497,5.74541557326393,34.9832009024475,41.5881947610649,26.9433690655751,68.4263057025443,24.5619479552018,23.4846724869667,26.7152519600984,36.0850683498214,85.5847516009272,88.9437099629553,79.445927665094,60.1969760422589,0,4.81215528727884,0.276242966807689,74.0553190661714,73.9290142107271,200.620354887919,0.902399225814824,0.15403067420883,0,0,0.211103257785751,0,0,0,0,3.52230368807009,6.52196706011309,0,0,0,0,0,0.512900250232778,3.60816110269676,1.62689197332152,8.3463219434655,0,0,5.74265537996172,10.4009639365843,38.5641431625983,55.2956508630938,17.5615423510695,15.350367472613,10.8890892262779,40.0677513358661,21.1724373114774,17.5566852477168,12.8206131331302,2.14870389969272,1.15314040419064,4.72167036229961,2.6301023022443,6.507837690162,238.627758897625,44.6103852902784,18.7900483907414,21.2922412126809,36.5371856671531,4.633105477598,3.72124705529177,50.6135382329148,72.4508882605882,40.6042313057747,36.3374863662094,30.3836681504084,244.380094407119,7.06453776179307,70.1502584574927,59.8490724824599,43.3549640632126,18.6007883047451,0,23.169215093144,35.5972629535401,38.2630178721117,32.7515454945942,155.473399093696,157.808462060343,186.463392423401,50.7256116062434,14.5956574553068,10.0843703608365,111.703678113471,68.8689489648964,0.811641507850816,4.957175969596,17.7468229595312,8.17444707563094,14.8356051929813,0,63.502230468637,62.9100753187039,44.7841054425467,110.426693565823,159.220297711467,4.23377295992253,2.01090682660736,0,9.0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| |||
|short_description=p1@PAMR1 | |||
}} |
Revision as of 07:20, 11 January 2014
Short description: | p1@PAMR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAMR1_5end |
Coexpression cluster: | C3150_mesenchymal_Smooth_Mesenchymal_Fibroblast_Prostate_Anulus_Trabecular |
Association with transcript: | 0bp_to_ENST00000278360, NM_001001991, NM_015430, uc001mwf.2, uc001mwg.2, uc010rew.1_5end |
EntrezGene: | PAMR1 |
HGNC: | 24554 |
UniProt: | Q6UXH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.46e-28 | 76 |
muscle precursor cell | 4.64e-19 | 58 |
myoblast | 4.64e-19 | 58 |
multi-potent skeletal muscle stem cell | 4.64e-19 | 58 |
muscle cell | 1.01e-18 | 55 |
electrically responsive cell | 4.24e-16 | 61 |
electrically active cell | 4.24e-16 | 61 |
smooth muscle cell | 9.37e-15 | 43 |
smooth muscle myoblast | 9.37e-15 | 43 |
skin fibroblast | 1.26e-10 | 23 |
vascular associated smooth muscle cell | 6.03e-09 | 32 |
preadipocyte | 1.98e-07 | 12 |