FFCP PHASE1:Hg19::chr12:24097201..24097216,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6660 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11201 | |||
|TSSclassifier=strong | |||
|UniProt=F5GWL1 | |||
|association_with_transcript=69bp_to_ENST00000538083_5end | |||
|coexpression_cluster_id=C3267 | |||
|description=CAGE_peak_10_at_SOX5_5end | |||
|id=chr12:24097201..24097216,- | |||
|ontology_enrichment_celltype=CL:0000667!2.61e-09!6;CL:0000058!2.61e-09!6;CL:0000138!2.61e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000138;3.75e-11;6!CL:0000047;5.71e-09;2!CL:0000153;9.84e-08;9!CL:0000447;9.84e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,3.06e-11,6;CL:0000138,3.06e-11,6;CL:0000153,8.60e-08,9;CL:0000447,8.60e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.31e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;5.71e-09;2!DOID:4236;5.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,3.71e-09,2;DOID:4236,3.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001893!5.30e-63!34;UBERON:0002020!6.50e-63!34;UBERON:0003528!6.50e-63!34;UBERON:0001869!2.06e-62!32;UBERON:0002791!5.55e-60!33;UBERON:0002780!2.85e-51!41;UBERON:0001890!2.85e-51!41;UBERON:0006240!2.85e-51!41;UBERON:0001049!7.17e-51!57;UBERON:0005068!7.17e-51!57;UBERON:0006241!7.17e-51!57;UBERON:0007135!7.17e-51!57;UBERON:0003080!6.58e-50!42;UBERON:0002616!6.86e-49!59;UBERON:0000956!3.69e-47!25;UBERON:0000203!3.69e-47!25;UBERON:0001017!6.79e-45!82;UBERON:0002619!4.97e-44!22;UBERON:0001950!2.34e-43!20;UBERON:0000955!1.05e-42!69;UBERON:0006238!1.05e-42!69;UBERON:0005743!2.03e-42!86;UBERON:0000073!4.03e-40!94;UBERON:0001016!4.03e-40!94;UBERON:0003075!5.63e-38!86;UBERON:0007284!5.63e-38!86;UBERON:0002346!6.62e-36!90;UBERON:0003056!2.24e-32!61;UBERON:0007023!1.03e-22!115;UBERON:0001871!1.01e-20!7;UBERON:0000033!1.51e-20!123;UBERON:0004121!9.02e-20!169;UBERON:0000153!3.20e-19!129;UBERON:0007811!3.20e-19!129;UBERON:0000924!4.21e-19!173;UBERON:0006601!4.21e-19!173;UBERON:0002420!2.30e-17!9;UBERON:0007245!2.30e-17!9;UBERON:0010009!2.30e-17!9;UBERON:0010011!2.30e-17!9;UBERON:0000454!2.30e-17!9;UBERON:0002308!8.21e-17!9;UBERON:0000125!8.21e-17!9;UBERON:0000200!3.32e-14!6;UBERON:0000369!1.82e-13!4;UBERON:0002435!1.82e-13!4;UBERON:0000204!1.82e-13!4;UBERON:0010082!1.82e-13!4;UBERON:0000025!4.01e-13!194;UBERON:0000064!1.76e-12!219;UBERON:0009663!1.52e-11!7;UBERON:0001872!1.80e-11!5;UBERON:0000349!4.68e-11!5;UBERON:0002771!6.40e-11!3;UBERON:0002021!9.93e-11!5;UBERON:0005383!1.17e-10!3;UBERON:0005382!1.17e-10!3;UBERON:0000988!1.42e-10!3;UBERON:0002298!3.94e-10!8;UBERON:0004111!6.38e-09!241;UBERON:0004732!1.01e-08!13;UBERON:0000483!4.13e-08!309;UBERON:0001876!4.61e-08!2;UBERON:0000119!6.05e-08!312;UBERON:0001873!1.15e-07!2;UBERON:0010122!1.15e-07!2;UBERON:0005162!1.23e-07!2;UBERON:0000122!1.23e-07!2;UBERON:0000477!1.96e-07!286;UBERON:0002148!2.54e-07!2;UBERON:0009662!2.54e-07!2;UBERON:0002360!5.49e-07!2;UBERON:0000094!5.49e-07!2;UBERON:0007645!5.49e-07!2;UBERON:0000481!7.92e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.73e-18;20!UBERON:0002619;1.04e-16;22!UBERON:0002022;1.31e-16;1!UBERON:0000941;1.31e-16;1!UBERON:0001785;1.31e-16;1!UBERON:0002464;1.31e-16;1!UBERON:0004904;1.31e-16;1!UBERON:0001021;1.31e-16;1!UBERON:0000956;8.65e-15;25!UBERON:0000203;8.65e-15;25!UBERON:0001872;3.43e-13;5!UBERON:0002791;7.29e-11;32!UBERON:0001869;1.16e-10;32!UBERON:0003528;7.36e-10;34!UBERON:0002020;7.36e-10;34!UBERON:0003714;5.71e-09;2!UBERON:0005162;5.71e-09;2!UBERON:0000122;5.71e-09;2!UBERON:0001893;6.70e-09;34!UBERON:0000073;8.79e-09;53!UBERON:0002616;8.79e-09;53!UBERON:0002780;3.10e-08;41!UBERON:0001890;3.10e-08;41!UBERON:0001016;6.16e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.16e-18,20;UBERON:0002022,6.47e-17,1;UBERON:0002619,1.19e-16,22;UBERON:0000941,1.21e-16,1;UBERON:0001785,1.21e-16,1;UBERON:0002464,1.21e-16,1;UBERON:0004904,1.21e-16,1;UBERON:0001021,1.21e-16,1;UBERON:0003902,1.21e-16,1;UBERON:0005425,1.21e-16,1;UBERON:0000956,9.73e-15,25;UBERON:0000203,9.73e-15,25;UBERON:0001872,5.27e-13,5;UBERON:0002791,1.27e-11,32;UBERON:0001869,1.27e-11,32;UBERON:0003528,5.87e-11,34;UBERON:0002020,5.87e-11,34;UBERON:0001893,5.87e-11,34;UBERON:0001016,5.82e-10,89;UBERON:0000073,6.24e-10,53;UBERON:0002616,6.24e-10,53;UBERON:0001049,2.14e-09,56;UBERON:0005068,2.14e-09,56;UBERON:0006241,2.14e-09,56;UBERON:0007135,2.14e-09,56;UBERON:0002780,3.94e-09,41;UBERON:0001890,3.94e-09,41;UBERON:0003080,3.94e-09,41;UBERON:0006240,3.94e-09,41;UBERON:0003714,5.49e-09,2;UBERON:0005162,5.49e-09,2;UBERON:0000122,5.49e-09,2;UBERON:0003056,1.19e-08,61;UBERON:0003075,1.52e-08,82;UBERON:0007284,1.52e-08,82;UBERON:0001017,1.54e-08,81;UBERON:0002346,3.96e-08,86;UBERON:0000955,1.34e-07,68;UBERON:0006238,1.34e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,1.5905718941022,1.45990461090791,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,1.90987494426621,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,3.36680037793539,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.443175571691151,0,0,0,0,0,0.572682980829578,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,1.18174773460835,0.329663433524666,0.674035438541849,0,0,0,0.408610218334727,0,0,0,0,0,1.82248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.500763722825999,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0.205116364240755,1.26035848110859,0.276629009856872,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0,1.2401207790071,0.507326481551255,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,1.01954599465248,0.591954962065642,0,0,0,0.471346769748006,0,0.913158720509496,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.815897882290976,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@SOX5 | |||
}} |
Revision as of 12:39, 11 January 2014
Short description: | p10@SOX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SOX5_5end |
Coexpression cluster: | C3267_temporal_parietal_duodenum_Chondrocyte_colon_occipital_Neural |
Association with transcript: | 69bp_to_ENST00000538083_5end |
EntrezGene: | SOX5 |
HGNC: | 11201 |
UniProt: | F5GWL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 3.06e-11 | 6 |
chondrocyte | 3.06e-11 | 6 |
GAG secreting cell | 8.60e-08 | 9 |
carbohydrate secreting cell | 8.60e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 3.71e-09 | 2 |
carcinosarcoma | 3.71e-09 | 2 |