FFCP PHASE1:Hg19::chr18:33047117..33047138,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_at_chr18:33047117..33047138,- | |||
|id=chr18:33047117..33047138,- | |||
|ontology_enrichment_celltype=CL:0002139!5.81e-54!24;CL:0000115!4.47e-52!35;CL:0000071!1.14e-41!18;CL:0002546!1.14e-41!18;CL:0002078!1.85e-39!44;CL:0000213!2.56e-28!57;CL:0000215!2.56e-28!57;CL:1000413!1.15e-21!9;CL:0002544!5.37e-15!6;CL:0002543!6.62e-15!6;CL:0005020!9.83e-14!6;CL:0002138!9.83e-14!6;CL:0005022!9.83e-14!6;CL:0000222!5.99e-10!119;CL:0002618!2.35e-08!3;CL:0002144!2.41e-08!3;CL:0000076!2.67e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.05e-111;24!CL:0000115;9.11e-96;36!CL:0000071;3.35e-85;18!CL:0002078;9.52e-57;45!CL:1000413;2.38e-43;9!CL:0000213;5.92e-41;58!CL:0000215;5.92e-41;58!CL:0002544;2.08e-29;6!CL:0002543;3.14e-29;6!CL:0002138;9.90e-27;6!CL:0002618;1.20e-15;3!CL:0002144;1.26e-15;3!CL:0002188;2.11e-15;5!CL:0000076;2.84e-13;63!CL:1000746;4.91e-11;7!CL:1000612;4.91e-11;7!CL:0002545;5.39e-11;2!CL:0002262;1.26e-10;2!CL:1000398;1.26e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.21e-114,36;CL:0002139,6.14e-111,24;CL:0002078,4.79e-90,45;CL:0000071,3.45e-85,18;CL:0002546,3.45e-85,18;CL:0000213,2.30e-68,58;CL:0000215,2.30e-68,58;CL:1000413,2.44e-43,9;CL:0002544,1.99e-29,6;CL:0000222,2.94e-29,121;CL:0002543,3.07e-29,6;CL:0005020,8.44e-27,6;CL:0002138,8.44e-27,6;CL:0005022,8.44e-27,6;CL:0000076,2.95e-21,63;CL:0002618,1.23e-15,3;CL:0002144,1.29e-15,3;CL:0002188,2.07e-15,5;CL:0002321,1.57e-11,250;CL:0000066,1.86e-11,253;CL:1000746,4.85e-11,7;CL:1000612,4.85e-11,7;CL:0002545,5.39e-11,2;CL:0002262,1.29e-10,2;CL:1000398,1.29e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002546;3.35e-85;18!CL:0005022;9.90e-27;6!CL:0000222;1.48e-12;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.14e-41!18;UBERON:0004638!1.14e-41!18;UBERON:0004852!1.14e-41!18;UBERON:0000487!4.97e-33!22;UBERON:0006914!2.25e-28!25;UBERON:0000055!6.09e-23!69;UBERON:0003915!1.15e-21!9;UBERON:0004700!1.15e-21!9;UBERON:0001917!1.15e-21!9;UBERON:0002049!6.92e-19!79;UBERON:0007798!6.92e-19!79;UBERON:0004872!7.84e-18!84;UBERON:0001981!1.38e-16!60;UBERON:0007500!1.38e-16!60;UBERON:0004537!1.38e-16!60;UBERON:0006965!1.38e-16!60;UBERON:0001009!1.38e-15!113;UBERON:0004535!3.62e-15!110;UBERON:0002465!1.65e-13!10;UBERON:0003914!1.89e-13!118;UBERON:0001638!8.55e-13!9;UBERON:0003920!8.55e-13!9;UBERON:0004582!8.55e-13!9;UBERON:0004111!1.82e-11!241;UBERON:0000477!3.48e-11!286;UBERON:0001473!4.48e-10!8;UBERON:0004536!4.48e-10!8;UBERON:0006558!4.48e-10!8;UBERON:0007023!2.89e-09!115;UBERON:0001915!2.41e-08!3;UBERON:0001982!2.41e-08!3;UBERON:0000025!5.13e-08!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.35e-85;18!UBERON:0001986;3.35e-85;18!UBERON:0004852;3.35e-85;18!UBERON:0000487;6.29e-69;22!UBERON:0006914;3.87e-60;25!UBERON:0003915;2.38e-43;9!UBERON:0004700;2.38e-43;9!UBERON:0001917;2.38e-43;9!UBERON:0000490;7.60e-41;33!UBERON:0000055;9.19e-28;65!UBERON:0001638;1.09e-25;9!UBERON:0003920;1.09e-25;9!UBERON:0004582;1.09e-25;9!UBERON:0002465;2.60e-21;10!UBERON:0007500;1.05e-20;56!UBERON:0001981;1.05e-20;56!UBERON:0004537;1.05e-20;56!UBERON:0001473;6.32e-20;8!UBERON:0004536;6.32e-20;8!UBERON:0006558;6.32e-20;8!UBERON:0002049;1.79e-17;75!UBERON:0007798;1.79e-17;75!UBERON:0003914;4.62e-16;74!UBERON:0010523;1.26e-15;3!UBERON:0001915;1.26e-15;3!UBERON:0001982;1.26e-15;3!UBERON:0000025;2.40e-11;93!UBERON:0000074;4.91e-11;7!UBERON:0001229;4.91e-11;7!UBERON:0005800;5.39e-11;2!UBERON:0001515;5.39e-11;2!UBERON:0000353;6.98e-11;15!UBERON:0001281;1.26e-10;2!UBERON:0003497;1.26e-10;2!UBERON:0003909;1.26e-10;2!UBERON:0003835;1.26e-10;2!UBERON:0004535;3.88e-10;109!UBERON:0001009;5.76e-10;112!UBERON:0002066;1.44e-09;5!UBERON:0004111;2.61e-09;130!UBERON:0001637;5.54e-08;42!UBERON:0003509;5.54e-08;42!UBERON:0004572;5.54e-08;42!UBERON:0000947;6.08e-08;21!UBERON:0010191;6.08e-08;21!UBERON:0001280;2.36e-07;3!UBERON:0004647;2.36e-07;3!UBERON:0002405;2.43e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.45e-85,18;UBERON:0001986,3.45e-85,18;UBERON:0004852,3.45e-85,18;UBERON:0000487,6.44e-69,22;UBERON:0006914,3.96e-60,25;UBERON:0000055,1.24e-45,68;UBERON:0003915,2.44e-43,9;UBERON:0004700,2.44e-43,9;UBERON:0001917,2.44e-43,9;UBERON:0002049,5.54e-39,78;UBERON:0007798,5.54e-39,78;UBERON:0007500,8.69e-32,59;UBERON:0001981,8.69e-32,59;UBERON:0004537,8.69e-32,59;UBERON:0006965,8.69e-32,59;UBERON:0004535,2.92e-28,109;UBERON:0001009,2.48e-27,112;UBERON:0001638,1.10e-25,9;UBERON:0003920,1.10e-25,9;UBERON:0004582,1.10e-25,9;UBERON:0004872,2.58e-23,83;UBERON:0003914,4.38e-22,117;UBERON:0002465,2.15e-21,10;UBERON:0001473,5.62e-20,8;UBERON:0004536,5.62e-20,8;UBERON:0006558,5.62e-20,8;UBERON:0004111,1.02e-15,240;UBERON:0010523,1.29e-15,3;UBERON:0001915,1.29e-15,3;UBERON:0001982,1.29e-15,3;UBERON:0000490,2.52e-13,148;UBERON:0000025,3.81e-12,192;UBERON:0010532,4.85e-11,7;UBERON:0000074,4.85e-11,7;UBERON:0001229,4.85e-11,7;UBERON:0001230,4.85e-11,7;UBERON:0003220,4.85e-11,7;UBERON:0005749,4.85e-11,7;UBERON:0004199,4.85e-11,7;UBERON:0004209,4.85e-11,7;UBERON:0004198,4.85e-11,7;UBERON:0005800,5.39e-11,2;UBERON:0001515,5.39e-11,2;UBERON:0000353,6.99e-11,15;UBERON:0001281,1.29e-10,2;UBERON:0003497,1.29e-10,2;UBERON:0003909,1.29e-10,2;UBERON:0003835,1.29e-10,2;UBERON:0003081,3.93e-10,203;UBERON:0005103,1.14e-09,8;UBERON:0000083,1.14e-09,8;UBERON:0009201,1.14e-09,8;UBERON:0006553,1.14e-09,8;UBERON:0003074,1.14e-09,8;UBERON:0003060,1.14e-09,8;UBERON:0002066,1.46e-09,5;UBERON:0000080,1.33e-08,9;UBERON:0002120,1.33e-08,9;UBERON:0004875,1.33e-08,9;UBERON:0005721,1.33e-08,9;UBERON:0005754,1.33e-08,9;UBERON:0007297,1.33e-08,9;UBERON:0000058,1.85e-08,19;UBERON:0000483,3.25e-08,306;UBERON:0000119,4.54e-08,309;UBERON:0001637,5.35e-08,42;UBERON:0003509,5.35e-08,42;UBERON:0004572,5.35e-08,42;UBERON:0000947,6.01e-08,21;UBERON:0010191,6.01e-08,21;UBERON:0001280,2.39e-07,3;UBERON:0004647,2.39e-07,3;UBERON:0005171,2.39e-07,3;UBERON:0004876,4.77e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,17.6898542556368,13.763753521698,22.9112731061012,6.78369530308812,26.847963917434,9.07889538402223,16.0926124233344,3.87625138753993,1.06729878806013,8.36801531911676,16.516002001475,13.6848979029332,13.4234131651493,11.7652185710678,20.253548697044,24.646725006406,13.4717623575702,10.3602562044656,9.19899824795299,7.59412527654503,21.8010075277185,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,1.0776853765575,0.490385709340376,0,0,0,0,2.85235910772225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42893272774789,12.6217596423101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87676382089396,1.85194205030644,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.09867072567173,6.80374821106063,3.02282282542995,4.62681758070868,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15415370381156,0,0,0,0,0,0.973865820823666,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,2.41981432097328,0.30607276163049,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.427149650270779,0.471612915298998,0,1.48849806543585,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0.386747327841463,0,0,0,0,0,1.37618785021362,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.426467963801962,0.952257725854961,0,0.0620747142958579,0,0.572824424503484,1.21270313374932,0,0.342233301085281,0.26940821205835,0.430333232356058,0,0,0,0,0,0,0.611207220914332,0.813792356631477,0.665756774185513,1.20764276154616,0 | |||
|short_description=p@chr18:33047117..33047138,- | |||
}} |
Revision as of 19:03, 20 January 2014
Short description: | p@chr18:33047117..33047138, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:33047117..33047138, - |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.21e-114 | 36 |
endothelial cell of vascular tree | 6.14e-111 | 24 |
meso-epithelial cell | 4.79e-90 | 45 |
blood vessel endothelial cell | 3.45e-85 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.45e-85 | 18 |
lining cell | 2.30e-68 | 58 |
barrier cell | 2.30e-68 | 58 |
endothelial cell of artery | 2.44e-43 | 9 |
aortic endothelial cell | 1.99e-29 | 6 |
mesodermal cell | 2.94e-29 | 121 |
vein endothelial cell | 3.07e-29 | 6 |
lymphangioblast | 8.44e-27 | 6 |
endothelial cell of lymphatic vessel | 8.44e-27 | 6 |
vascular lymphangioblast | 8.44e-27 | 6 |
squamous epithelial cell | 2.95e-21 | 63 |
endothelial cell of umbilical vein | 1.23e-15 | 3 |
capillary endothelial cell | 1.29e-15 | 3 |
glomerular endothelial cell | 2.07e-15 | 5 |
embryonic cell | 1.57e-11 | 250 |
epithelial cell | 1.86e-11 | 253 |
glomerular cell | 4.85e-11 | 7 |
kidney corpuscule cell | 4.85e-11 | 7 |
thoracic aorta endothelial cell | 5.39e-11 | 2 |
endothelial cell of sinusoid | 1.29e-10 | 2 |
endothelial cell of hepatic sinusoid | 1.29e-10 | 2 |