FFCP PHASE1:Hg19::chr2:33701707..33701723,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14545 | |||
|TSSclassifier=strong | |||
|UniProt=C9JWP0,C9JSS2,C9IYA5 | |||
|association_with_transcript=0bp_to_ENST00000423159,ENST00000425210,ENST00000444784_5end | |||
|coexpression_cluster_id=C2698 | |||
|description=CAGE_peak_1_at_RASGRP3_5end | |||
|id=chr2:33701707..33701723,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.53e-26!140;CL:0002031!1.74e-24!124;CL:0002087!1.88e-23!119;CL:0000037!2.47e-23!172;CL:0000566!2.47e-23!172;CL:0000988!1.01e-22!182;CL:0002032!2.82e-22!165;CL:0000837!2.82e-22!165;CL:0000945!7.41e-14!24;CL:0000826!7.41e-14!24;CL:0000557!1.77e-13!71;CL:0000839!3.19e-13!70;CL:0002009!7.92e-13!65;CL:0000766!2.89e-12!76;CL:0002194!5.68e-12!63;CL:0000576!5.68e-12!63;CL:0000040!5.68e-12!63;CL:0000559!5.68e-12!63;CL:0000763!9.39e-12!112;CL:0000049!9.39e-12!112;CL:0002057!5.44e-11!42;CL:0000542!7.20e-11!53;CL:0000051!7.20e-11!53;CL:0000838!1.47e-10!52;CL:0000236!4.04e-09!14;CL:0000860!4.83e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.94e-17;24!CL:0000473;2.53e-13;39!CL:0000234;2.53e-13;39!CL:0000860;9.19e-12;33!CL:0002057;9.19e-12;33!CL:0000236;1.89e-10;13!CL:0002087;1.53e-08;104!CL:0000576;1.43e-07;48!CL:0000542;2.47e-07;53!CL:0000738;3.99e-07;136!CL:0000451;5.85e-07;10!CL:0000990;9.38e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.29e-30,136;CL:0002031,5.22e-28,120;CL:0002087,8.81e-28,115;CL:0000037,1.77e-27,168;CL:0000988,9.38e-27,177;CL:0002032,5.29e-26,161;CL:0000837,5.29e-26,161;CL:0000945,5.19e-17,24;CL:0000826,5.19e-17,24;CL:0002009,1.78e-16,61;CL:0000557,3.12e-16,67;CL:0000839,6.45e-16,66;CL:0002194,2.20e-15,59;CL:0000576,2.20e-15,59;CL:0000040,2.20e-15,59;CL:0000559,2.20e-15,59;CL:0000766,2.92e-15,72;CL:0000763,1.94e-14,108;CL:0000049,1.94e-14,108;CL:0000473,2.58e-14,48;CL:0000234,2.58e-14,48;CL:0000542,1.94e-11,53;CL:0000051,1.94e-11,53;CL:0000236,3.31e-11,14;CL:0000838,4.54e-11,52;CL:0000860,1.81e-10,42;CL:0002057,1.81e-10,42;CL:0000451,5.71e-07,10;CL:0000990,6.84e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.13e-08;42!CL:0000051;2.47e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.69e-34!115;UBERON:0002193!4.44e-20!112;UBERON:0002390!1.18e-18!102;UBERON:0003061!1.18e-18!102;UBERON:0001049!1.42e-14!57;UBERON:0005068!1.42e-14!57;UBERON:0006241!1.42e-14!57;UBERON:0007135!1.42e-14!57;UBERON:0002405!2.32e-11!115;UBERON:0002371!3.09e-11!80;UBERON:0002616!3.13e-11!59;UBERON:0003080!5.35e-11!42;UBERON:0002780!1.07e-10!41;UBERON:0001890!1.07e-10!41;UBERON:0006240!1.07e-10!41;UBERON:0001474!6.96e-10!86;UBERON:0005743!3.06e-09!86;UBERON:0002020!3.28e-09!34;UBERON:0003528!3.28e-09!34;UBERON:0001893!3.38e-09!34;UBERON:0000955!5.29e-09!69;UBERON:0006238!5.29e-09!69;UBERON:0002791!9.07e-09!33;UBERON:0003075!2.72e-08!86;UBERON:0007284!2.72e-08!86;UBERON:0001017!2.79e-08!82;UBERON:0001869!4.08e-08!32;UBERON:0000178!5.05e-08!15;UBERON:0000179!5.05e-08!15;UBERON:0000463!5.05e-08!15;UBERON:0004765!6.14e-08!101;UBERON:0001434!6.14e-08!101;UBERON:0000073!1.32e-07!94;UBERON:0001016!1.32e-07!94;UBERON:0002346!1.57e-07!90;UBERON:0002619!2.47e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.26e-10;114!UBERON:0001893;3.04e-10;34!UBERON:0002780;3.28e-10;41!UBERON:0001890;3.28e-10;41!UBERON:0003528;5.45e-10;34!UBERON:0002020;5.45e-10;34!UBERON:0000073;1.01e-09;53!UBERON:0002616;1.01e-09;53!UBERON:0002791;1.52e-09;32!UBERON:0000178;1.66e-09;15!UBERON:0000179;1.66e-09;15!UBERON:0000463;1.66e-09;15!UBERON:0001869;1.90e-09;32!UBERON:0002619;7.70e-09;22!UBERON:0001950;8.67e-08;20!UBERON:0000125;4.87e-07;9!UBERON:0002308;4.87e-07;9!UBERON:0000956;5.45e-07;25!UBERON:0000203;5.45e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.20e-36,114;UBERON:0002193,1.56e-24,108;UBERON:0002390,2.25e-22,98;UBERON:0003061,2.25e-22,98;UBERON:0001049,1.31e-18,56;UBERON:0005068,1.31e-18,56;UBERON:0006241,1.31e-18,56;UBERON:0007135,1.31e-18,56;UBERON:0002405,3.23e-17,93;UBERON:0000073,9.01e-17,53;UBERON:0002616,9.01e-17,53;UBERON:0002780,6.56e-14,41;UBERON:0001890,6.56e-14,41;UBERON:0003080,6.56e-14,41;UBERON:0006240,6.56e-14,41;UBERON:0002371,1.22e-13,76;UBERON:0003075,1.50e-13,82;UBERON:0007284,1.50e-13,82;UBERON:0002346,5.30e-12,86;UBERON:0001474,7.23e-12,82;UBERON:0003528,7.62e-12,34;UBERON:0002020,7.62e-12,34;UBERON:0001893,7.91e-12,34;UBERON:0000955,1.17e-11,68;UBERON:0006238,1.17e-11,68;UBERON:0002791,1.32e-10,32;UBERON:0001017,1.63e-10,81;UBERON:0001869,1.83e-10,32;UBERON:0000178,1.69e-09,15;UBERON:0000179,1.69e-09,15;UBERON:0000463,1.69e-09,15;UBERON:0004765,3.17e-09,90;UBERON:0003056,5.26e-09,61;UBERON:0002619,7.69e-09,22;UBERON:0010371,8.64e-09,104;UBERON:0001016,1.53e-08,89;UBERON:0001434,1.92e-08,100;UBERON:0001950,8.58e-08,20;UBERON:0010314,1.80e-07,132;UBERON:0000125,4.84e-07,9;UBERON:0002308,4.84e-07,9;UBERON:0000956,5.44e-07,25;UBERON:0000203,5.44e-07,25 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0.982935746006035,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0,7.25927354605537,7.14275128214528,7.24139188085849,24.781949441481,6.1412703695554,5.57338043937874,0.919421224478927,0,0,87.073133452259,86.01238565489,3.52320527201817,17.1738576644882,10.0272223735071,10.4165217943609,27.7655188057506,30.1221109397651,31.4242192513708,4.50734540216651,15.1150377475524,4.60909716256851,3.95129362739664,11.9238687526329,15.7950249156503,3.16461631554365,4.86705342405291,10.6417003449863,12.0660988257816,18.0735711403471,29.7938270507552,8.47090527941721,24.2886473551483,22.0229014756183,16.8346140803996,28.8836124368484,25.5734850319616,2.30895910130701,6.38283704389222,4.68847225585964,8.12585868160035,3.40431134814684,4.35975574296902,4.01997864410789,13.5585558789252,14.986030284653,3.63239701580021,13.9945501675275,12.0255707227536,0.633765858935825,0.850417199860174,0.419317291016752,0.22465726229299,0.300353785683013,0.48217676009124,0.285012743741249,0.19891667719909,0,133.757145790605,106.497029196116,105.851601209763,91.7469978517991,88.4875131349588,96.5584099123532,94.5294168082353,111.624289280638,88.2280102119645,64.0088536414323,79.1305582219224,5.28685314316103,19.6177997043538,5.26768169550154,1.37696839079683,0.786021525498329,2.05601498999509,0.334372990781356,0.977766799900771,0.473447805734733,1.94826728407911,1.6711568532776,2.65145316727353,0.664601683750863,4.06205795647523,0.512365278902701,1.69077151827842,0.164437904603676,0.552700035571697,1.15921234294021,0.889719378972363,0.267540828089713,0,0.339928028092699,0.766440987203842,0,3.28925599625354,1.27426165729639,1.30216690771284,0,1.20460095262218,1.02389288923535,1.24930726552346,2.8413270245282,2.46338399076314,0.604820229674197,1.06976078313403,0.724122019413995,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0.087834785693126,3.33996642519167,0,0,64.2603839436273,63.3832243769333,34.4361117743861,1.90792499444274,4.0039643754609,1.11437250398869,0.993812036833525,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.835979866147242,6.97725249757188,9.24992282985447,12.3846626722928,2.01414658554573,6.0821768457481,2.19655851793353,5.8826092855339,0,3.03619076165871,2.2452937262617,0.900891843866578,0,0.949265659568129,0.732806975721629,3.9534125230819,3.87780264148325,0,0.496971951695318,0.12663051166458,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0.468642863667593,0.312160076830321,2.2818872861778,0.448346041655403,0.939475989150119,1.61872944368132,2.38766371393822,1.42907919878425,1.47401180774122,0.309977343527296,0,0.494533858557114,0,0,4.71341119071385,1.37630371859161,1.6623846929051,0.438977620880838,0,0.150238058906597,0,1.25572744982203,1.49490172172997,0.423863802319124,0.300091096084402,1.03052529238439,2.06112432036503,1.8611685633159,0.506328996723799,0.292311015483596,2.52433774244115,2.48534726334208,1.93975268182574,0,0.201504196455281,0.67824236924195,0,0,0,0,0,0.232387885739037,0,0,0,10.9514672630871,5.14592750554308,1.38134921352481,0,0,0.473227200159376,0.337169380156203,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0,1.40241773803446,0,0,0,0.982827216677626,2.36315962672562,0,1.72183813960359,0,0,0,0.100528972411631,0,0,0,0,0,0,2.7429625074604,1.85194205030644,3.42457474022277,0,0,34.716597858323,34.6326312406072,24.078248290774,0,0,0.141775097242386,0,0,0,2.95597942737566,0.880484340132261,3.7319060797339,0.720599767084807,1.13618190083742,23.6212166766869,2.67391897890794,10.5495702489042,0,4.93571964975953,7.20823338825402,16.8637595252041,0,0,0,1.29271715757778,0,0,4.78688609852767,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0,0,66.8930793526548,73.3295353490905,59.0335030552489,0.479249710983165,1.14861935834114,0,0,0,0,1.2329365839288,1.37921532141349,1.07813787429759,1.66845947163673,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,1.66376689224646,3.03329280955175,2.68094105557689,1.05427273493442,0.601892199455438,0,0,0,0,2.25897397617015,0,0.343143423810856,7.03011288817817,7.11856862701436,3.842192080924,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0,0,0.925258162815933,0,0.739144404124282,0.519254429183621,0.116210378459959,0.604297247958111,0,0.0920809889358963,0.229628896329213,0.910455840033585,0.524497659837696,0,0.924184045252977,0,0,0.422206515571503,1.13733384070897,0.340187410553031,0.647747748306418,1.54227252690289,0,0,0,0,0,17.9793098849666,14.3789498063695,9.74510475442279,1.31205858279882,6.83294628795036,2.06082023295445,0,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0.10115778085555,0.929691098594572,0.31481234683064,0,0.308033580176089,0,1.73986598415015,0,0,0.744316738719335,1.2655176988749,0,0.255897791311334,0,0,0,0.539617372749944,0,0.117812402345686,0.202182481573316,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| |||
|short_description=p1@RASGRP3 | |||
}} |
Revision as of 02:32, 21 January 2014
Short description: | p1@RASGRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASGRP3_5end |
Coexpression cluster: | C2698_CD19_b_lymphoma_Burkitt_Dendritic_immature_Monocytederived |
Association with transcript: | 0bp_to_ENST00000423159, ENST00000425210, ENST00000444784_5end |
EntrezGene: | RASGRP3 |
HGNC: | 14545 |
UniProt: | C9JWP0C9JSS2C9IYA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.29e-30 | 136 |
hematopoietic lineage restricted progenitor cell | 5.22e-28 | 120 |
nongranular leukocyte | 8.81e-28 | 115 |
hematopoietic stem cell | 1.77e-27 | 168 |
hematopoietic cell | 9.38e-27 | 177 |
hematopoietic oligopotent progenitor cell | 5.29e-26 | 161 |
hematopoietic multipotent progenitor cell | 5.29e-26 | 161 |
lymphocyte of B lineage | 5.19e-17 | 24 |
pro-B cell | 5.19e-17 | 24 |
macrophage dendritic cell progenitor | 1.78e-16 | 61 |
granulocyte monocyte progenitor cell | 3.12e-16 | 67 |
myeloid lineage restricted progenitor cell | 6.45e-16 | 66 |
monopoietic cell | 2.20e-15 | 59 |
monocyte | 2.20e-15 | 59 |
monoblast | 2.20e-15 | 59 |
promonocyte | 2.20e-15 | 59 |
myeloid leukocyte | 2.92e-15 | 72 |
myeloid cell | 1.94e-14 | 108 |
common myeloid progenitor | 1.94e-14 | 108 |
defensive cell | 2.58e-14 | 48 |
phagocyte | 2.58e-14 | 48 |
lymphocyte | 1.94e-11 | 53 |
common lymphoid progenitor | 1.94e-11 | 53 |
B cell | 3.31e-11 | 14 |
lymphoid lineage restricted progenitor cell | 4.54e-11 | 52 |
classical monocyte | 1.81e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.81e-10 | 42 |
dendritic cell | 5.71e-07 | 10 |
conventional dendritic cell | 6.84e-07 | 8 |