FFCP PHASE1:Hg19::chr21:45432174..45432254,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7109 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11868 | |||
|TSSclassifier=strong | |||
|UniProt=P48553,Q86SI7,F8WE24 | |||
|association_with_transcript=0bp_to_ENST00000291574,ENST00000380221,ENST00000422875,NM_003274,uc002zdz.2,uc002zea.2,uc010gpo.2_5end | |||
|coexpression_cluster_id=C175 | |||
|description=CAGE_peak_1_at_TRAPPC10_5end | |||
|id=chr21:45432174..45432254,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.99e-43!140;CL:0000037!1.13e-42!172;CL:0000566!1.13e-42!172;CL:0000988!8.24e-40!182;CL:0002032!1.69e-39!165;CL:0000837!1.69e-39!165;CL:0002031!1.07e-33!124;CL:0002087!4.00e-33!119;CL:0000763!2.71e-26!112;CL:0000049!2.71e-26!112;CL:0000766!2.07e-25!76;CL:0000557!4.80e-22!71;CL:0000839!1.24e-20!70;CL:0002009!1.54e-20!65;CL:0002057!9.88e-20!42;CL:0002194!1.32e-19!63;CL:0000576!1.32e-19!63;CL:0000040!1.32e-19!63;CL:0000559!1.32e-19!63;CL:0000860!2.15e-17!45;CL:0000838!6.82e-12!52;CL:0000542!8.90e-12!53;CL:0000051!8.90e-12!53;CL:0000791!2.96e-09!18;CL:0000789!2.96e-09!18;CL:0002420!2.96e-09!18;CL:0002419!2.96e-09!18;CL:0000790!2.96e-09!18;CL:0000084!2.68e-07!25;CL:0000827!2.68e-07!25;CL:0000094!9.48e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.07e-14;33!CL:0002057;2.07e-14;33!CL:0000473;2.11e-13;39!CL:0000234;2.11e-13;39!CL:0000576;4.59e-12;48!CL:0000766;1.31e-11;69!CL:0002087;3.29e-10;104!CL:0000738;1.45e-09;136!CL:0000791;2.83e-09;18!CL:0000789;2.83e-09;18!CL:0002419;2.83e-09;18!CL:0000763;1.28e-07;100!CL:0000988;1.77e-07;177!CL:0000084;2.55e-07;25!CL:0000542;2.61e-07;53!CL:0000094;9.39e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.34e-45,136;CL:0000037,6.95e-44,168;CL:0000988,1.92e-41,177;CL:0002032,1.11e-40,161;CL:0000837,1.11e-40,161;CL:0002031,4.61e-35,120;CL:0002087,1.59e-34,115;CL:0000763,1.65e-27,108;CL:0000049,1.65e-27,108;CL:0000766,4.14e-27,72;CL:0000557,1.23e-23,67;CL:0002009,3.66e-22,61;CL:0000839,3.75e-22,66;CL:0002194,3.31e-21,59;CL:0000576,3.31e-21,59;CL:0000040,3.31e-21,59;CL:0000559,3.31e-21,59;CL:0000473,5.48e-21,48;CL:0000234,5.48e-21,48;CL:0000860,9.88e-20,42;CL:0002057,9.88e-20,42;CL:0000838,6.82e-12,52;CL:0000542,8.90e-12,53;CL:0000051,8.90e-12,53;CL:0000791,2.96e-09,18;CL:0000789,2.96e-09,18;CL:0002420,2.96e-09,18;CL:0002419,2.96e-09,18;CL:0000790,2.96e-09,18;CL:0000084,2.68e-07,25;CL:0000827,2.68e-07,25;CL:0000094,9.48e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.91e-14;42!CL:0000790;2.83e-09;18!CL:0000049;2.50e-08;108!CL:0000051;2.61e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.64e-26!102;UBERON:0003061!3.64e-26!102;UBERON:0002193!8.94e-22!112;UBERON:0002371!1.10e-18!80;UBERON:0001474!1.99e-17!86;UBERON:0007023!1.92e-14!115;UBERON:0004765!1.03e-12!101;UBERON:0001434!1.03e-12!101;UBERON:0001049!2.77e-12!57;UBERON:0005068!2.77e-12!57;UBERON:0006241!2.77e-12!57;UBERON:0007135!2.77e-12!57;UBERON:0002405!5.21e-11!115;UBERON:0003080!2.17e-10!42;UBERON:0002780!5.08e-10!41;UBERON:0001890!5.08e-10!41;UBERON:0006240!5.08e-10!41;UBERON:0002616!7.16e-10!59;UBERON:0000955!2.05e-09!69;UBERON:0006238!2.05e-09!69;UBERON:0001017!5.27e-09!82;UBERON:0002020!1.72e-08!34;UBERON:0003528!1.72e-08!34;UBERON:0001893!2.03e-08!34;UBERON:0005743!3.33e-08!86;UBERON:0002791!3.62e-08!33;UBERON:0000073!3.64e-08!94;UBERON:0001016!3.64e-08!94;UBERON:0001869!1.73e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.49e-07;41!UBERON:0001890;1.49e-07;41!UBERON:0003528;3.60e-07;34!UBERON:0002020;3.60e-07;34!UBERON:0001893;3.94e-07;34!UBERON:0002791;6.18e-07;32!UBERON:0001869;8.80e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.74e-27,98;UBERON:0003061,1.74e-27,98;UBERON:0002193,8.32e-23,108;UBERON:0002371,6.53e-20,76;UBERON:0001474,1.66e-18,82;UBERON:0002405,1.49e-17,93;UBERON:0007023,3.61e-14,114;UBERON:0004765,4.62e-14,90;UBERON:0001049,6.44e-12,56;UBERON:0005068,6.44e-12,56;UBERON:0006241,6.44e-12,56;UBERON:0007135,6.44e-12,56;UBERON:0001434,1.43e-11,100;UBERON:0000073,5.98e-11,53;UBERON:0002616,5.98e-11,53;UBERON:0002780,5.08e-10,41;UBERON:0001890,5.08e-10,41;UBERON:0003080,5.08e-10,41;UBERON:0006240,5.08e-10,41;UBERON:0000955,4.28e-09,68;UBERON:0006238,4.28e-09,68;UBERON:0001017,1.05e-08,81;UBERON:0001016,1.29e-08,89;UBERON:0003528,1.72e-08,34;UBERON:0002020,1.72e-08,34;UBERON:0001893,2.03e-08,34;UBERON:0002791,1.03e-07,32;UBERON:0001869,1.73e-07,32 | |||
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| |||
|short_description=p1@TRAPPC10 | |||
}} |
Revision as of 14:06, 21 January 2014
Short description: | p1@TRAPPC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRAPPC10_5end |
Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
Association with transcript: | 0bp_to_ENST00000291574, ENST00000380221, ENST00000422875, NM_003274, uc002zdz.2, uc002zea.2, uc010gpo.2_5end |
EntrezGene: | TRAPPC10 |
HGNC: | 11868 |
UniProt: | P48553Q86SI7F8WE24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.74e-27 | 98 |
blood island | 1.74e-27 | 98 |
hemolymphoid system | 8.32e-23 | 108 |
bone marrow | 6.53e-20 | 76 |
bone element | 1.66e-18 | 82 |
immune system | 1.49e-17 | 93 |
adult organism | 3.61e-14 | 114 |
skeletal element | 4.62e-14 | 90 |
neural tube | 6.44e-12 | 56 |
neural rod | 6.44e-12 | 56 |
future spinal cord | 6.44e-12 | 56 |
neural keel | 6.44e-12 | 56 |
skeletal system | 1.43e-11 | 100 |
regional part of nervous system | 5.98e-11 | 53 |
regional part of brain | 5.98e-11 | 53 |
regional part of forebrain | 5.08e-10 | 41 |
forebrain | 5.08e-10 | 41 |
anterior neural tube | 5.08e-10 | 41 |
future forebrain | 5.08e-10 | 41 |
brain | 4.28e-09 | 68 |
future brain | 4.28e-09 | 68 |
central nervous system | 1.05e-08 | 81 |
nervous system | 1.29e-08 | 89 |
brain grey matter | 1.72e-08 | 34 |
gray matter | 1.72e-08 | 34 |
telencephalon | 2.03e-08 | 34 |
regional part of telencephalon | 1.03e-07 | 32 |
cerebral hemisphere | 1.73e-07 | 32 |