FFCP PHASE1:Hg19::chr8:110704014..110704028,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26011 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NX95,E9PNN9 | |||
|association_with_transcript=0bp_to_ENST00000419099,ENST00000422135,ENST00000529190,NM_001099743,NM_001099744,uc003ynp.3,uc010mcu.2,uc010mcv.2_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_16_at_SYBU_5end | |||
|id=chr8:110704014..110704028,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.50e-14;1!UBERON:0010122;3.95e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.09e-72!57;UBERON:0005068!3.09e-72!57;UBERON:0006241!3.09e-72!57;UBERON:0007135!3.09e-72!57;UBERON:0000073!2.45e-67!94;UBERON:0001016!2.45e-67!94;UBERON:0001017!8.99e-66!82;UBERON:0005743!1.71e-65!86;UBERON:0002780!1.87e-62!41;UBERON:0001890!1.87e-62!41;UBERON:0006240!1.87e-62!41;UBERON:0002616!8.37e-62!59;UBERON:0000955!3.06e-61!69;UBERON:0006238!3.06e-61!69;UBERON:0001893!4.03e-61!34;UBERON:0002020!5.06e-61!34;UBERON:0003528!5.06e-61!34;UBERON:0003080!8.09e-61!42;UBERON:0001869!2.32e-60!32;UBERON:0002791!4.69e-58!33;UBERON:0003075!1.59e-50!86;UBERON:0007284!1.59e-50!86;UBERON:0002619!9.56e-50!22;UBERON:0002346!7.23e-48!90;UBERON:0001950!5.65e-44!20;UBERON:0000956!2.06e-43!25;UBERON:0000203!2.06e-43!25;UBERON:0003056!9.41e-43!61;UBERON:0007023!9.12e-36!115;UBERON:0000033!1.67e-34!123;UBERON:0000153!2.59e-34!129;UBERON:0007811!2.59e-34!129;UBERON:0004121!4.30e-33!169;UBERON:0000924!4.37e-32!173;UBERON:0006601!4.37e-32!173;UBERON:0001871!1.02e-20!7;UBERON:0002420!2.36e-19!9;UBERON:0007245!2.36e-19!9;UBERON:0010009!2.36e-19!9;UBERON:0010011!2.36e-19!9;UBERON:0000454!2.36e-19!9;UBERON:0002308!9.44e-19!9;UBERON:0000125!9.44e-19!9;UBERON:0000349!1.54e-17!5;UBERON:0000025!4.42e-17!194;UBERON:0000369!3.20e-15!4;UBERON:0002435!3.20e-15!4;UBERON:0000204!3.20e-15!4;UBERON:0010082!3.20e-15!4;UBERON:0000200!4.36e-14!6;UBERON:0009663!3.55e-13!7;UBERON:0003076!8.72e-13!15;UBERON:0003057!8.72e-13!15;UBERON:0004111!6.24e-12!241;UBERON:0005383!8.19e-12!3;UBERON:0005382!8.19e-12!3;UBERON:0002021!1.45e-11!5;UBERON:0001872!4.46e-11!5;UBERON:0002771!1.19e-10!3;UBERON:0000988!1.72e-10!3;UBERON:0000477!4.36e-10!286;UBERON:0000064!1.38e-09!219;UBERON:0004733!2.36e-09!12;UBERON:0002028!2.36e-09!12;UBERON:0007277!2.36e-09!12;UBERON:0000483!2.55e-09!309;UBERON:0000119!3.88e-09!312;UBERON:0002680!5.78e-09!9;UBERON:0001895!5.78e-09!9;UBERON:0010092!5.78e-09!9;UBERON:0004732!1.39e-08!13;UBERON:0001876!2.50e-08!2;UBERON:0001873!2.50e-08!2;UBERON:0010122!2.50e-08!2;UBERON:0000475!2.53e-08!365;UBERON:0002148!1.50e-07!2;UBERON:0009662!1.50e-07!2;UBERON:0001954!1.65e-07!2;UBERON:0003022!1.65e-07!2;UBERON:0002421!1.65e-07!2;UBERON:0002600!1.65e-07!2;UBERON:0002298!9.19e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;5.18e-53;32!UBERON:0001869;3.57e-51;32!UBERON:0003528;7.42e-45;34!UBERON:0002020;7.42e-45;34!UBERON:0001893;2.53e-43;34!UBERON:0002780;3.43e-41;41!UBERON:0001890;3.43e-41;41!UBERON:0001950;3.02e-39;20!UBERON:0002420;5.75e-37;9!UBERON:0007245;5.75e-37;9!UBERON:0010009;5.75e-37;9!UBERON:0010011;5.75e-37;9!UBERON:0000454;5.75e-37;9!UBERON:0002619;8.70e-36;22!UBERON:0000956;1.36e-31;25!UBERON:0000203;1.36e-31;25!UBERON:0000369;6.97e-31;4!UBERON:0002435;6.97e-31;4!UBERON:0000204;6.97e-31;4!UBERON:0009663;7.41e-31;7!UBERON:0002021;2.56e-24;5!UBERON:0000125;4.28e-24;9!UBERON:0002308;4.28e-24;9!UBERON:0000073;1.25e-23;53!UBERON:0002616;1.25e-23;53!UBERON:0000955;2.87e-22;68!UBERON:0005383;3.68e-19;3!UBERON:0005382;3.68e-19;3!UBERON:0001871;1.42e-17;6!UBERON:0001017;2.61e-16;75!UBERON:0001874;4.72e-15;1!UBERON:0002902;1.50e-14;1!UBERON:0001882;1.50e-14;1!UBERON:0002022;1.50e-14;1!UBERON:0009899;1.50e-14;1!UBERON:0005403;1.50e-14;1!UBERON:0001016;3.15e-13;83!UBERON:0000349;1.58e-11;5!UBERON:0001873;3.95e-08;2!UBERON:0001876;6.35e-08;2!UBERON:0001875;6.35e-08;2!UBERON:0006514;6.35e-08;2!UBERON:0011216;2.87e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,4.79e-56,32;UBERON:0001869,4.79e-56,32;UBERON:0003528,8.80e-53,34;UBERON:0002020,8.80e-53,34;UBERON:0001893,8.80e-53,34;UBERON:0002780,1.33e-51,41;UBERON:0001890,1.33e-51,41;UBERON:0003080,1.33e-51,41;UBERON:0006240,1.33e-51,41;UBERON:0000073,7.18e-40,53;UBERON:0002616,7.18e-40,53;UBERON:0001950,5.55e-39,20;UBERON:0001049,1.05e-37,56;UBERON:0005068,1.05e-37,56;UBERON:0006241,1.05e-37,56;UBERON:0007135,1.05e-37,56;UBERON:0002420,2.74e-37,9;UBERON:0007245,2.74e-37,9;UBERON:0010009,2.74e-37,9;UBERON:0010011,2.74e-37,9;UBERON:0000454,2.74e-37,9;UBERON:0000955,1.45e-35,68;UBERON:0006238,1.45e-35,68;UBERON:0002619,1.52e-35,22;UBERON:0003056,1.45e-34,61;UBERON:0000956,2.22e-31,25;UBERON:0000203,2.22e-31,25;UBERON:0009663,4.18e-31,7;UBERON:0000369,4.66e-31,4;UBERON:0002435,4.66e-31,4;UBERON:0000204,4.66e-31,4;UBERON:0010082,4.66e-31,4;UBERON:0001017,8.69e-30,81;UBERON:0001016,9.69e-27,89;UBERON:0003075,1.72e-25,82;UBERON:0007284,1.72e-25,82;UBERON:0002021,2.28e-24,5;UBERON:0000125,2.75e-24,9;UBERON:0002308,2.75e-24,9;UBERON:0002346,2.95e-24,86;UBERON:0010371,7.29e-20,104;UBERON:0005383,3.86e-19,3;UBERON:0005382,3.86e-19,3;UBERON:0001871,1.74e-17,6;UBERON:0010314,2.22e-15,132;UBERON:0001874,4.73e-15,1;UBERON:0001882,8.17e-15,1;UBERON:0005403,8.17e-15,1;UBERON:0002902,1.61e-14,1;UBERON:0009899,1.61e-14,1;UBERON:0002022,2.75e-14,1;UBERON:0004121,1.92e-13,171;UBERON:0000924,1.92e-13,171;UBERON:0006601,1.92e-13,171;UBERON:0007023,7.89e-13,114;UBERON:0000349,1.09e-11,5;UBERON:0011216,1.32e-11,223;UBERON:0000025,3.98e-10,192;UBERON:0001873,4.09e-08,2;UBERON:0010122,4.09e-08,2;UBERON:0001875,5.02e-08,2;UBERON:0006514,5.02e-08,2;UBERON:0001876,5.37e-08,2;UBERON:0004111,8.68e-08,240 | |||
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|short_description=p16@SYBU | |||
}} |
Revision as of 23:23, 22 January 2014
Short description: | p16@SYBU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SYBU_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000419099, ENST00000422135, ENST00000529190, NM_001099743, NM_001099744, uc003ynp.3, uc010mcu.2, uc010mcv.2_5end |
EntrezGene: | SYBU |
HGNC: | 26011 |
UniProt: | Q9NX95E9PNN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data