FFCP PHASE1:Hg19::chr10:6622426..6622477,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-23bp_to_uc001ijl.2_5end | |||
|cluster_id=chr10:6622426..6622477,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_uc001ijl.2_5end | |||
|id=chr10:6622426..6622477,+ | |||
|ontology_enrichment_celltype=CL:0000084!6.47e-13!25;CL:0000827!6.47e-13!25;CL:0000791!1.74e-12!18;CL:0000789!1.74e-12!18;CL:0002420!1.74e-12!18;CL:0002419!1.74e-12!18;CL:0000790!1.74e-12!18;CL:0000625!2.21e-08!11;CL:0000542!7.43e-07!53;CL:0000051!7.43e-07!53;CL:0000838!8.81e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.37e-15;25!CL:0000791;9.36e-15;18!CL:0000789;9.36e-15;18!CL:0002419;9.36e-15;18!CL:0000625;8.68e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.53e-15,25;CL:0000827,1.53e-15,25;CL:0000791,1.08e-14,18;CL:0000789,1.08e-14,18;CL:0002420,1.08e-14,18;CL:0002419,1.08e-14,18;CL:0000790,1.08e-14,18;CL:0000542,5.45e-10,53;CL:0000051,5.45e-10,53;CL:0000838,6.58e-10,52;CL:0000625,9.23e-10,11;CL:0000988,9.33e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;9.36e-15;18 | |||
|ontology_enrichment_disease=DOID:1240!1.52e-12!39;DOID:2531!3.52e-12!51;DOID:0060083!3.52e-12!51;DOID:8692!3.01e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.15e-12;31!DOID:1240;3.31e-11;39!DOID:2531;3.09e-09;51!DOID:0060083;3.09e-09;51!DOID:1036;5.18e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.20e-14,39;DOID:2531,9.20e-14,51;DOID:0060083,9.20e-14,51;DOID:8692,8.30e-13,31;DOID:1036,5.25e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-16!115;UBERON:0005743!1.77e-12!86;UBERON:0001049!2.96e-12!57;UBERON:0005068!2.96e-12!57;UBERON:0006241!2.96e-12!57;UBERON:0007135!2.96e-12!57;UBERON:0001017!1.67e-11!82;UBERON:0000153!4.18e-11!129;UBERON:0007811!4.18e-11!129;UBERON:0001893!1.96e-10!34;UBERON:0002020!2.71e-10!34;UBERON:0003528!2.71e-10!34;UBERON:0002616!3.91e-10!59;UBERON:0002791!4.67e-10!33;UBERON:0000073!6.33e-10!94;UBERON:0001016!6.33e-10!94;UBERON:0003075!8.47e-10!86;UBERON:0007284!8.47e-10!86;UBERON:0001869!1.48e-09!32;UBERON:0002780!2.49e-09!41;UBERON:0001890!2.49e-09!41;UBERON:0006240!2.49e-09!41;UBERON:0003080!3.17e-09!42;UBERON:0000955!3.92e-09!69;UBERON:0006238!3.92e-09!69;UBERON:0000033!4.03e-09!123;UBERON:0003056!4.37e-09!61;UBERON:0002346!2.25e-08!90;UBERON:0000178!2.28e-08!15;UBERON:0000179!2.28e-08!15;UBERON:0000463!2.28e-08!15;UBERON:0000956!2.04e-07!25;UBERON:0000203!2.04e-07!25;UBERON:0002619!3.04e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.66e-10;34!UBERON:0003528;6.91e-10;34!UBERON:0002020;6.91e-10;34!UBERON:0000178;9.36e-10;15!UBERON:0000179;9.36e-10;15!UBERON:0000463;9.36e-10;15!UBERON:0001869;1.04e-09;32!UBERON:0002791;1.12e-09;32!UBERON:0002780;5.10e-08;41!UBERON:0001890;5.10e-08;41!UBERON:0000956;5.45e-08;25!UBERON:0000203;5.45e-08;25!UBERON:0002619;1.27e-07;22!UBERON:0000073;1.61e-07;53!UBERON:0002616;1.61e-07;53!UBERON:0002390;3.69e-07;32!UBERON:0001950;5.19e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.24e-16,114;UBERON:0001049,1.47e-13,56;UBERON:0005068,1.47e-13,56;UBERON:0006241,1.47e-13,56;UBERON:0007135,1.47e-13,56;UBERON:0000073,1.40e-12,53;UBERON:0002616,1.40e-12,53;UBERON:0003075,1.24e-11,82;UBERON:0007284,1.24e-11,82;UBERON:0001893,1.42e-11,34;UBERON:0001017,1.75e-11,81;UBERON:0003528,2.07e-11,34;UBERON:0002020,2.07e-11,34;UBERON:0003056,3.25e-11,61;UBERON:0002780,1.02e-10,41;UBERON:0001890,1.02e-10,41;UBERON:0003080,1.02e-10,41;UBERON:0006240,1.02e-10,41;UBERON:0002791,1.50e-10,32;UBERON:0001869,1.56e-10,32;UBERON:0002346,3.30e-10,86;UBERON:0000178,9.56e-10,15;UBERON:0000179,9.56e-10,15;UBERON:0000463,9.56e-10,15;UBERON:0001016,2.91e-09,89;UBERON:0010371,2.96e-09,104;UBERON:0000955,3.84e-09,68;UBERON:0006238,3.84e-09,68;UBERON:0000956,5.43e-08,25;UBERON:0000203,5.43e-08,25;UBERON:0002619,9.32e-08,22;UBERON:0001950,4.14e-07,20 | |||
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| |||
|short_description=p1@uc001ijl.2 | |||
}} |
Latest revision as of 14:49, 23 July 2015
Short description: | p1@uc001ijl.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001ijl.2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -23bp_to_uc001ijl.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.53e-15 | 25 |
pro-T cell | 1.53e-15 | 25 |
mature alpha-beta T cell | 1.08e-14 | 18 |
alpha-beta T cell | 1.08e-14 | 18 |
immature T cell | 1.08e-14 | 18 |
mature T cell | 1.08e-14 | 18 |
immature alpha-beta T cell | 1.08e-14 | 18 |
lymphocyte | 5.45e-10 | 53 |
common lymphoid progenitor | 5.45e-10 | 53 |
lymphoid lineage restricted progenitor cell | 6.58e-10 | 52 |
CD8-positive, alpha-beta T cell | 9.23e-10 | 11 |
hematopoietic cell | 9.33e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.24e-16 | 114 |
neural tube | 1.47e-13 | 56 |
neural rod | 1.47e-13 | 56 |
future spinal cord | 1.47e-13 | 56 |
neural keel | 1.47e-13 | 56 |
regional part of nervous system | 1.40e-12 | 53 |
regional part of brain | 1.40e-12 | 53 |
neural plate | 1.24e-11 | 82 |
presumptive neural plate | 1.24e-11 | 82 |
telencephalon | 1.42e-11 | 34 |
central nervous system | 1.75e-11 | 81 |
brain grey matter | 2.07e-11 | 34 |
gray matter | 2.07e-11 | 34 |
pre-chordal neural plate | 3.25e-11 | 61 |
regional part of forebrain | 1.02e-10 | 41 |
forebrain | 1.02e-10 | 41 |
anterior neural tube | 1.02e-10 | 41 |
future forebrain | 1.02e-10 | 41 |
regional part of telencephalon | 1.50e-10 | 32 |
cerebral hemisphere | 1.56e-10 | 32 |
neurectoderm | 3.30e-10 | 86 |
blood | 9.56e-10 | 15 |
haemolymphatic fluid | 9.56e-10 | 15 |
organism substance | 9.56e-10 | 15 |
nervous system | 2.91e-09 | 89 |
ecto-epithelium | 2.96e-09 | 104 |
brain | 3.84e-09 | 68 |
future brain | 3.84e-09 | 68 |
cerebral cortex | 5.43e-08 | 25 |
pallium | 5.43e-08 | 25 |
regional part of cerebral cortex | 9.32e-08 | 22 |
neocortex | 4.14e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.20e-14 | 39 |
hematologic cancer | 9.20e-14 | 51 |
immune system cancer | 9.20e-14 | 51 |
myeloid leukemia | 8.30e-13 | 31 |
chronic leukemia | 5.25e-07 | 8 |