FFCP PHASE1:Hg19::chr19:9964795..9964828,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:9964795..9964828,- | |||
|coexpression_cluster_id=C1245 | |coexpression_cluster_id=C1245 | ||
|description=CAGE_peak_at_chr19:9964795..9964828,- | |description=CAGE_peak_at_chr19:9964795..9964828,- | ||
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|ontology_enrichment_celltype=CL:0000136!1.55e-07!15;CL:0000047!2.86e-07!8 | |ontology_enrichment_celltype=CL:0000136!1.55e-07!15;CL:0000047!2.86e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.95e-09;6!CL:0000404;1.95e-09;6!CL:0000136;1.59e-08;13!CL:0002322;1.68e-07;5 | |ontology_enrichment_celltype_v019=CL:0000540;1.95e-09;6!CL:0000404;1.95e-09;6!CL:0000136;1.59e-08;13!CL:0002322;1.68e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.12e-11,8;CL:0000136,1.15e-09,15;CL:0000540,1.86e-09,6;CL:0000031,1.86e-09,6;CL:0000404,1.86e-09,6;CL:0002322,1.49e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;1.95e-09;6!UBERON:0006601;2.51e-09;82 | |ontology_enrichment_development_v019=CL:0000031;1.95e-09;6!UBERON:0006601;2.51e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;2.68e-27;34!UBERON:0002020;2.68e-27;34!UBERON:0001869;3.58e-26;32!UBERON:0001893;5.74e-26;34!UBERON:0002791;8.14e-26;32!UBERON:0000956;3.18e-24;25!UBERON:0000203;3.18e-24;25!UBERON:0002619;5.69e-23;22!UBERON:0002780;8.35e-23;41!UBERON:0001890;8.35e-23;41!UBERON:0000073;7.88e-21;53!UBERON:0002616;7.88e-21;53!UBERON:0001950;8.14e-21;20!UBERON:0000955;6.08e-17;68!UBERON:0001017;4.16e-15;75!UBERON:0001016;5.86e-15;83!UBERON:0000922;5.25e-10;49!UBERON:0001871;9.53e-09;6!UBERON:0002420;5.08e-08;9!UBERON:0007245;5.08e-08;9!UBERON:0010009;5.08e-08;9!UBERON:0010011;5.08e-08;9!UBERON:0000454;5.08e-08;9!UBERON:0000125;5.58e-08;9!UBERON:0002308;5.58e-08;9!UBERON:0000200;5.97e-08;6!UBERON:0001872;3.02e-07;5!UBERON:0002050;3.65e-07;5!UBERON:0005423;3.65e-07;5!UBERON:0000349;7.23e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0003528;2.68e-27;34!UBERON:0002020;2.68e-27;34!UBERON:0001869;3.58e-26;32!UBERON:0001893;5.74e-26;34!UBERON:0002791;8.14e-26;32!UBERON:0000956;3.18e-24;25!UBERON:0000203;3.18e-24;25!UBERON:0002619;5.69e-23;22!UBERON:0002780;8.35e-23;41!UBERON:0001890;8.35e-23;41!UBERON:0000073;7.88e-21;53!UBERON:0002616;7.88e-21;53!UBERON:0001950;8.14e-21;20!UBERON:0000955;6.08e-17;68!UBERON:0001017;4.16e-15;75!UBERON:0001016;5.86e-15;83!UBERON:0000922;5.25e-10;49!UBERON:0001871;9.53e-09;6!UBERON:0002420;5.08e-08;9!UBERON:0007245;5.08e-08;9!UBERON:0010009;5.08e-08;9!UBERON:0010011;5.08e-08;9!UBERON:0000454;5.08e-08;9!UBERON:0000125;5.58e-08;9!UBERON:0002308;5.58e-08;9!UBERON:0000200;5.97e-08;6!UBERON:0001872;3.02e-07;5!UBERON:0002050;3.65e-07;5!UBERON:0005423;3.65e-07;5!UBERON:0000349;7.23e-07;5 | ||
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| ||
|short_description=p@chr19:9964795..9964828,- | |short_description=p@chr19:9964795..9964828,- | ||
}} | }} |
Latest revision as of 18:50, 27 July 2015
Short description: | p@chr19:9964795..9964828, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:9964795..9964828, - |
Coexpression cluster: | C1245_normal_Neurons_parietal_temporal_neuroectodermal_occipital_basal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.12e-11 | 8 |
fat cell | 1.15e-09 | 15 |
neuron | 1.86e-09 | 6 |
neuroblast | 1.86e-09 | 6 |
electrically signaling cell | 1.86e-09 | 6 |
embryonic stem cell | 1.49e-07 | 5 |