FFCP PHASE1:Hg19::chr22:36760442..36760471,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:36760442..36760471,-
|short_description=p@chr22:36760442..36760471,-
|description=CAGE_peak_at_chr22:36760442..36760471,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:36760442..36760471,- | |||
|description=CAGE_peak_at_chr22:36760442..36760471,- | |||
|id=chr22:36760442..36760471,- | |||
|ontology_enrichment_celltype=CL:0000359!1.19e-17!32;CL:0000055!1.49e-17!180;CL:0000192!2.52e-17!42;CL:0000514!2.52e-17!42;CL:0000187!1.59e-14!54;CL:0000680!4.99e-14!57;CL:0000056!4.99e-14!57;CL:0000355!4.99e-14!57;CL:0000183!2.96e-13!59;CL:0000393!5.96e-12!60;CL:0000211!5.96e-12!60;CL:0000057!1.48e-08!75;CL:0002334!8.42e-08!12;CL:0002595!7.51e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.78e-33;32!CL:0000192;2.22e-22;43!CL:0002594;2.75e-14;4!CL:0000187;6.11e-12;55!CL:0000393;1.09e-11;61!CL:0000211;1.09e-11;61!CL:0002595;1.32e-10;5!CL:0002592;2.74e-10;3!CL:0002494;9.38e-09;16!CL:0002589;8.94e-08;2!CL:0002596;2.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.55e-36,32;CL:0000192,8.77e-31,43;CL:0000514,8.77e-31,43;CL:0000187,9.50e-23,55;CL:0000680,2.90e-21,58;CL:0000056,2.90e-21,58;CL:0000355,2.90e-21,58;CL:0000393,6.31e-20,61;CL:0000211,6.31e-20,61;CL:0002594,2.82e-14,4;CL:0000048,4.89e-11,427;CL:0002595,9.51e-11,5;CL:0000723,1.05e-10,433;CL:0002592,2.47e-10,3;CL:0000034,2.81e-10,441;CL:0000222,4.85e-09,121;CL:0002494,1.01e-08,16;CL:0000057,2.85e-08,76;CL:0002589,8.14e-08,2;CL:0002596,2.68e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;2.22e-22;43!CL:0000355;1.08e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!3.15e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.26e-17;14!DOID:120;3.84e-08;27!DOID:193;1.84e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.44e-17,14;DOID:120,3.10e-08,27;DOID:193,1.51e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!4.66e-20!42;UBERON:0003509!4.66e-20!42;UBERON:0004572!4.66e-20!42;UBERON:0004573!6.61e-17!33;UBERON:0004571!6.61e-17!33;UBERON:0004872!7.35e-16!84;UBERON:0001981!8.78e-16!60;UBERON:0007500!8.78e-16!60;UBERON:0004537!8.78e-16!60;UBERON:0006965!8.78e-16!60;UBERON:0002385!2.40e-14!63;UBERON:0001015!2.40e-14!63;UBERON:0000383!2.40e-14!63;UBERON:0001134!2.31e-13!61;UBERON:0002036!2.31e-13!61;UBERON:0003082!2.31e-13!61;UBERON:0000055!4.13e-12!69;UBERON:0003914!7.45e-12!118;UBERON:0002049!2.32e-10!79;UBERON:0007798!2.32e-10!79;UBERON:0004290!3.44e-10!70;UBERON:0000914!3.56e-09!83;UBERON:0002329!3.56e-09!83;UBERON:0003077!3.56e-09!83;UBERON:0003059!3.56e-09!83;UBERON:0007282!3.56e-09!83;UBERON:0009618!3.56e-09!83;UBERON:0007285!3.56e-09!83;UBERON:0001009!6.40e-09!113;UBERON:0005256!1.91e-08!143;UBERON:0004535!2.98e-08!110;UBERON:0000025!6.93e-08!194;UBERON:0000486!8.86e-08!82;UBERON:0003513!1.23e-07!8;UBERON:0000475!5.29e-07!365;UBERON:0007100!6.04e-07!27;UBERON:0003834!7.51e-07!5;UBERON:0001533!7.51e-07!5;UBERON:0004111!9.65e-07!241;UBERON:0002118!9.69e-07!5;UBERON:0004532!9.69e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.97e-20;33!UBERON:0004571;5.97e-20;33!UBERON:0001637;1.45e-19;42!UBERON:0003509;1.45e-19;42!UBERON:0004572;1.45e-19;42!UBERON:0001310;2.75e-14;4!UBERON:0007500;2.42e-12;56!UBERON:0001981;2.42e-12;56!UBERON:0004537;2.42e-12;56!UBERON:0000992;1.68e-11;13!UBERON:0003513;3.33e-11;7!UBERON:0002118;5.15e-11;5!UBERON:0003834;1.32e-10;5!UBERON:0001533;1.32e-10;5!UBERON:0003498;2.74e-10;3!UBERON:0005985;2.74e-10;3!UBERON:0001621;2.74e-10;3!UBERON:0000055;1.18e-08;65!UBERON:0007100;1.91e-08;25!UBERON:0002049;3.72e-08;75!UBERON:0007798;3.72e-08;75!UBERON:0000948;8.02e-08;22!UBERON:0002119;8.25e-08;4!UBERON:0001529;8.94e-08;2!UBERON:0007204;8.94e-08;2!UBERON:0005396;2.17e-07;2!UBERON:0003914;2.55e-07;74 | |||
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| ||
|short_description=p@chr22:36760442..36760471,- | |||
}} | }} |
Latest revision as of 20:46, 28 July 2015
Short description: | p@chr22:36760442..36760471, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:36760442..36760471, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.55e-36 | 32 |
smooth muscle cell | 8.77e-31 | 43 |
smooth muscle myoblast | 8.77e-31 | 43 |
muscle cell | 9.50e-23 | 55 |
muscle precursor cell | 2.90e-21 | 58 |
myoblast | 2.90e-21 | 58 |
multi-potent skeletal muscle stem cell | 2.90e-21 | 58 |
electrically responsive cell | 6.31e-20 | 61 |
electrically active cell | 6.31e-20 | 61 |
smooth muscle cell of the umbilical artery | 2.82e-14 | 4 |
multi fate stem cell | 4.89e-11 | 427 |
smooth muscle cell of the subclavian artery | 9.51e-11 | 5 |
somatic stem cell | 1.05e-10 | 433 |
smooth muscle cell of the coronary artery | 2.47e-10 | 3 |
stem cell | 2.81e-10 | 441 |
mesodermal cell | 4.85e-09 | 121 |
cardiocyte | 1.01e-08 | 16 |
fibroblast | 2.85e-08 | 76 |
smooth muscle cell of the brachiocephalic vasculature | 8.14e-08 | 2 |
smooth muscle cell of the carotid artery | 2.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.44e-17 | 14 |
female reproductive organ cancer | 3.10e-08 | 27 |
reproductive organ cancer | 1.51e-07 | 29 |