FFCP PHASE1:Hg19::chr2:58113708..58113730,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:58113708..58113730,- | |||
|description=CAGE_peak_at_chr2:58113708..58113730,- | |description=CAGE_peak_at_chr2:58113708..58113730,- | ||
|id=chr2:58113708..58113730,- | |id=chr2:58113708..58113730,- | ||
|ontology_enrichment_celltype=CL:0000242!3.94e-08!2 | |ontology_enrichment_celltype=CL:0000242!3.94e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.78e-18;2!CL:0000242;1.78e-18;2!CL:0000167;2.07e-10;1!CL:0000164;2.07e-10;1!CL:0000502;2.07e-10;1!CL:0000172;2.07e-10;1!CL:0000173;2.07e-10;1!CL:0002553;2.84e-10;1!CL:0000312;6.20e-08;5!CL:0000240;9.55e-07;6!CL:0000311;9.55e-07;6!CL:0000079;9.55e-07;6!CL:0000237;9.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.87e-18,2;CL:0000167,2.16e-10,1;CL:0000164,2.16e-10,1;CL:0000502,2.16e-10,1;CL:0000172,2.16e-10,1;CL:0000173,2.16e-10,1;CL:0002351,2.16e-10,1;CL:0002553,2.84e-10,1;CL:0000312,6.31e-08,5;CL:0000240,9.69e-07,6;CL:0000311,9.69e-07,6;CL:0000079,9.69e-07,6;CL:0000237,9.69e-07,6;CL:0000036,9.69e-07,6;CL:0000357,9.69e-07,6;CL:0000114,9.69e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002351;2.07e-10;1!CL:0000357;9.55e-07;6!CL:0000114;9.55e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;2.07e-10;1!DOID:3119;2.09e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.94e-10,14;DOID:4430,2.16e-10,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000007;8.78e-19;2!UBERON:0002298;2.78e-13;6!UBERON:0001896;3.00e-12;3!UBERON:0005290;3.00e-12;3!UBERON:0001894;7.70e-12;7!UBERON:0000073;1.31e-10;53!UBERON:0002616;1.31e-10;53!UBERON:0003296;7.40e-10;4!UBERON:0010133;7.40e-10;4!UBERON:0002336;8.24e-10;1!UBERON:0002038;8.24e-10;1!UBERON:0011215;8.24e-10;1!UBERON:0001018;8.24e-10;1!UBERON:0009661;8.24e-10;1!UBERON:0002950;8.24e-10;1!UBERON:0002473;8.24e-10;1!UBERON:0005340;8.24e-10;1!UBERON:0003544;8.24e-10;1!UBERON:0005970;8.24e-10;1!UBERON:0002316;8.24e-10;1!UBERON:0001020;8.24e-10;1!UBERON:0001891;8.24e-10;1!UBERON:0002437;8.24e-10;1!UBERON:0002780;1.49e-08;41!UBERON:0001890;1.49e-08;41!UBERON:0004733;6.75e-07;12!UBERON:0002028;6.75e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.40e-19,2;UBERON:0001049,1.84e-16,56;UBERON:0005068,1.84e-16,56;UBERON:0006241,1.84e-16,56;UBERON:0007135,1.84e-16,56;UBERON:0000073,2.33e-14,53;UBERON:0002616,2.33e-14,53;UBERON:0002298,2.15e-13,6;UBERON:0001896,2.38e-12,3;UBERON:0005290,2.38e-12,3;UBERON:0010096,2.38e-12,3;UBERON:0001894,8.44e-12,7;UBERON:0006222,8.44e-12,7;UBERON:0010371,1.18e-11,104;UBERON:0001017,9.30e-11,81;UBERON:0003075,9.30e-11,82;UBERON:0007284,9.30e-11,82;UBERON:0000955,9.86e-11,68;UBERON:0006238,9.86e-11,68;UBERON:0002346,3.50e-10,86;UBERON:0002038,6.33e-10,1;UBERON:0009661,6.33e-10,1;UBERON:0002950,6.33e-10,1;UBERON:0001891,6.33e-10,1;UBERON:0009616,6.33e-10,1;UBERON:0010286,6.33e-10,1;UBERON:0003296,7.24e-10,4;UBERON:0010133,7.24e-10,4;UBERON:0002336,7.55e-10,1;UBERON:0011215,7.55e-10,1;UBERON:0001018,7.55e-10,1;UBERON:0002473,7.55e-10,1;UBERON:0005340,7.55e-10,1;UBERON:0003544,7.55e-10,1;UBERON:0005970,7.55e-10,1;UBERON:0002316,7.55e-10,1;UBERON:0001020,7.55e-10,1;UBERON:0002437,7.55e-10,1;UBERON:0001016,1.56e-09,89;UBERON:0003076,2.27e-09,15;UBERON:0003057,2.27e-09,15;UBERON:0002780,2.49e-09,41;UBERON:0001890,2.49e-09,41;UBERON:0003080,2.49e-09,41;UBERON:0006240,2.49e-09,41;UBERON:0007023,2.21e-07,114;UBERON:0004733,5.96e-07,12;UBERON:0002028,5.96e-07,12;UBERON:0007277,5.96e-07,12 | |||
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|short_description=p@chr2:58113708..58113730,- | |short_description=p@chr2:58113708..58113730,- | ||
}} | }} |
Latest revision as of 11:04, 29 July 2015
Short description: | p@chr2:58113708..58113730, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:58113708..58113730, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.87e-18 | 2 |
peptide hormone secreting cell | 2.16e-10 | 1 |
enteroendocrine cell | 2.16e-10 | 1 |
type D enteroendocrine cell | 2.16e-10 | 1 |
somatostatin secreting cell | 2.16e-10 | 1 |
pancreatic D cell | 2.16e-10 | 1 |
progenitor cell of endocrine pancreas | 2.16e-10 | 1 |
lung fibroblast | 2.84e-10 | 1 |
keratinocyte | 6.31e-08 | 5 |
stratified squamous epithelial cell | 9.69e-07 | 6 |
keratin accumulating cell | 9.69e-07 | 6 |
stratified epithelial cell | 9.69e-07 | 6 |
keratinizing barrier epithelial cell | 9.69e-07 | 6 |
epithelial fate stem cell | 9.69e-07 | 6 |
stratified epithelial stem cell | 9.69e-07 | 6 |
surface ectodermal cell | 9.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.94e-10 | 14 |
somatostatinoma | 2.16e-10 | 1 |