FFCP PHASE1:Hg19::chr4:93224904..93224918,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:93224904..93224918,+ | |||
|coexpression_cluster_id=C1084 | |coexpression_cluster_id=C1084 | ||
|description=CAGE_peak_at_chr4:93224904..93224918,+ | |description=CAGE_peak_at_chr4:93224904..93224918,+ | ||
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|ontology_enrichment_celltype=CL:0002322!5.73e-12!5;CL:0000540!2.67e-07!6;CL:0000031!2.67e-07!6;CL:0000404!2.67e-07!6 | |ontology_enrichment_celltype=CL:0002322!5.73e-12!5;CL:0000540!2.67e-07!6;CL:0000031!2.67e-07!6;CL:0000404!2.67e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002553;8.61e-11;1!CL:0000540;3.25e-07;6!CL:0000404;3.25e-07;6 | |ontology_enrichment_celltype_v019=CL:0002553;8.61e-11;1!CL:0000540;3.25e-07;6!CL:0000404;3.25e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,6.14e-11,1;CL:0000540,3.80e-07,6;CL:0000031,3.80e-07,6;CL:0000404,3.80e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.09e-30;3!UBERON:0010122;7.90e-20;2!CL:0000031;3.25e-07;6 | |ontology_enrichment_development_v019=UBERON:0006215;3.09e-30;3!UBERON:0010122;7.90e-20;2!CL:0000031;3.25e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.13e-58!82;UBERON:0001049!1.32e-57!57;UBERON:0005068!1.32e-57!57;UBERON:0006241!1.32e-57!57;UBERON:0007135!1.32e-57!57;UBERON:0005743!2.56e-57!86;UBERON:0000073!1.07e-50!94;UBERON:0001016!1.07e-50!94;UBERON:0000955!4.62e-47!69;UBERON:0006238!4.62e-47!69;UBERON:0002616!3.14e-46!59;UBERON:0002020!5.15e-43!34;UBERON:0003528!5.15e-43!34;UBERON:0003075!7.92e-43!86;UBERON:0007284!7.92e-43!86;UBERON:0001893!8.70e-43!34;UBERON:0002346!1.86e-42!90;UBERON:0002791!9.92e-41!33;UBERON:0002780!2.14e-40!41;UBERON:0001890!2.14e-40!41;UBERON:0006240!2.14e-40!41;UBERON:0003080!2.94e-39!42;UBERON:0001869!8.86e-39!32;UBERON:0002619!1.55e-31!22;UBERON:0001950!6.14e-31!20;UBERON:0007023!4.23e-29!115;UBERON:0000924!4.27e-29!173;UBERON:0006601!4.27e-29!173;UBERON:0004121!8.59e-29!169;UBERON:0000033!1.03e-28!123;UBERON:0003056!1.59e-28!61;UBERON:0000956!2.71e-27!25;UBERON:0000203!2.71e-27!25;UBERON:0000153!7.99e-27!129;UBERON:0007811!7.99e-27!129;UBERON:0003076!4.68e-19!15;UBERON:0003057!4.68e-19!15;UBERON:0002308!9.20e-18!9;UBERON:0000125!9.20e-18!9;UBERON:0002420!9.40e-18!9;UBERON:0007245!9.40e-18!9;UBERON:0010009!9.40e-18!9;UBERON:0010011!9.40e-18!9;UBERON:0000454!9.40e-18!9;UBERON:0001871!1.89e-15!7;UBERON:0000025!2.82e-14!194;UBERON:0009663!3.47e-13!7;UBERON:0004733!5.20e-13!12;UBERON:0002028!5.20e-13!12;UBERON:0007277!5.20e-13!12;UBERON:0004732!6.96e-12!13;UBERON:0000369!1.54e-11!4;UBERON:0002435!1.54e-11!4;UBERON:0000204!1.54e-11!4;UBERON:0010082!1.54e-11!4;UBERON:0002298!8.83e-11!8;UBERON:0000200!1.48e-10!6;UBERON:0002680!2.49e-10!9;UBERON:0001895!2.49e-10!9;UBERON:0010092!2.49e-10!9;UBERON:0004111!6.34e-10!241;UBERON:0005383!4.02e-09!3;UBERON:0005382!4.02e-09!3;UBERON:0000349!7.03e-09!5;UBERON:0002771!1.73e-08!3;UBERON:0000483!1.86e-08!309;UBERON:0002240!2.40e-08!3;UBERON:0006331!2.72e-08!3;UBERON:0000988!2.78e-08!3;UBERON:0000119!2.93e-08!312;UBERON:0001872!4.14e-08!5;UBERON:0002021!5.19e-08!5;UBERON:0000064!8.96e-08!219;UBERON:0000477!3.11e-07!286;UBERON:0000922!3.12e-07!612;UBERON:0000475!3.71e-07!365 | |ontology_enrichment_uberon=UBERON:0001017!4.13e-58!82;UBERON:0001049!1.32e-57!57;UBERON:0005068!1.32e-57!57;UBERON:0006241!1.32e-57!57;UBERON:0007135!1.32e-57!57;UBERON:0005743!2.56e-57!86;UBERON:0000073!1.07e-50!94;UBERON:0001016!1.07e-50!94;UBERON:0000955!4.62e-47!69;UBERON:0006238!4.62e-47!69;UBERON:0002616!3.14e-46!59;UBERON:0002020!5.15e-43!34;UBERON:0003528!5.15e-43!34;UBERON:0003075!7.92e-43!86;UBERON:0007284!7.92e-43!86;UBERON:0001893!8.70e-43!34;UBERON:0002346!1.86e-42!90;UBERON:0002791!9.92e-41!33;UBERON:0002780!2.14e-40!41;UBERON:0001890!2.14e-40!41;UBERON:0006240!2.14e-40!41;UBERON:0003080!2.94e-39!42;UBERON:0001869!8.86e-39!32;UBERON:0002619!1.55e-31!22;UBERON:0001950!6.14e-31!20;UBERON:0007023!4.23e-29!115;UBERON:0000924!4.27e-29!173;UBERON:0006601!4.27e-29!173;UBERON:0004121!8.59e-29!169;UBERON:0000033!1.03e-28!123;UBERON:0003056!1.59e-28!61;UBERON:0000956!2.71e-27!25;UBERON:0000203!2.71e-27!25;UBERON:0000153!7.99e-27!129;UBERON:0007811!7.99e-27!129;UBERON:0003076!4.68e-19!15;UBERON:0003057!4.68e-19!15;UBERON:0002308!9.20e-18!9;UBERON:0000125!9.20e-18!9;UBERON:0002420!9.40e-18!9;UBERON:0007245!9.40e-18!9;UBERON:0010009!9.40e-18!9;UBERON:0010011!9.40e-18!9;UBERON:0000454!9.40e-18!9;UBERON:0001871!1.89e-15!7;UBERON:0000025!2.82e-14!194;UBERON:0009663!3.47e-13!7;UBERON:0004733!5.20e-13!12;UBERON:0002028!5.20e-13!12;UBERON:0007277!5.20e-13!12;UBERON:0004732!6.96e-12!13;UBERON:0000369!1.54e-11!4;UBERON:0002435!1.54e-11!4;UBERON:0000204!1.54e-11!4;UBERON:0010082!1.54e-11!4;UBERON:0002298!8.83e-11!8;UBERON:0000200!1.48e-10!6;UBERON:0002680!2.49e-10!9;UBERON:0001895!2.49e-10!9;UBERON:0010092!2.49e-10!9;UBERON:0004111!6.34e-10!241;UBERON:0005383!4.02e-09!3;UBERON:0005382!4.02e-09!3;UBERON:0000349!7.03e-09!5;UBERON:0002771!1.73e-08!3;UBERON:0000483!1.86e-08!309;UBERON:0002240!2.40e-08!3;UBERON:0006331!2.72e-08!3;UBERON:0000988!2.78e-08!3;UBERON:0000119!2.93e-08!312;UBERON:0001872!4.14e-08!5;UBERON:0002021!5.19e-08!5;UBERON:0000064!8.96e-08!219;UBERON:0000477!3.11e-07!286;UBERON:0000922!3.12e-07!612;UBERON:0000475!3.71e-07!365 | ||
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|short_description=p@chr4:93224904..93224918,+ | |short_description=p@chr4:93224904..93224918,+ | ||
}} | }} |
Latest revision as of 08:04, 30 July 2015
Short description: | p@chr4:93224904..93224918, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:93224904..93224918, + |
Coexpression cluster: | C1084_cerebellum_iPS_HES3GFP_nonsmall_occipital_parietal_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 6.14e-11 | 1 |
neuron | 3.80e-07 | 6 |
neuroblast | 3.80e-07 | 6 |
electrically signaling cell | 3.80e-07 | 6 |