FFCP PHASE1:Hg19::chr6:163848296..163848300,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:163848296..163848300,+ | |||
|coexpression_cluster_id=C1279 | |||
|description=CAGE_peak_at_chr6:163848296..163848300,+ | |description=CAGE_peak_at_chr6:163848296..163848300,+ | ||
|id=chr6:163848296..163848300,+ | |id=chr6:163848296..163848300,+ | ||
|ontology_enrichment_celltype=CL:0000766!7.07e-25!76;CL:0000738!2.53e-23!140;CL:0002057!5.21e-23!42;CL:0000557!4.26e-21!71;CL:0000839!4.73e-21!70;CL:0000037!7.60e-21!172;CL:0000566!7.60e-21!172;CL:0000988!8.48e-21!182;CL:0002009!1.04e-20!65;CL:0000763!3.00e-20!112;CL:0000049!3.00e-20!112;CL:0002194!9.75e-20!63;CL:0000576!9.75e-20!63;CL:0000040!9.75e-20!63;CL:0000559!9.75e-20!63;CL:0000860!1.34e-19!45;CL:0002032!2.76e-18!165;CL:0000837!2.76e-18!165;CL:0002031!4.11e-18!124;CL:0002087!1.21e-16!119 | |ontology_enrichment_celltype=CL:0000766!7.07e-25!76;CL:0000738!2.53e-23!140;CL:0002057!5.21e-23!42;CL:0000557!4.26e-21!71;CL:0000839!4.73e-21!70;CL:0000037!7.60e-21!172;CL:0000566!7.60e-21!172;CL:0000988!8.48e-21!182;CL:0002009!1.04e-20!65;CL:0000763!3.00e-20!112;CL:0000049!3.00e-20!112;CL:0002194!9.75e-20!63;CL:0000576!9.75e-20!63;CL:0000040!9.75e-20!63;CL:0000559!9.75e-20!63;CL:0000860!1.34e-19!45;CL:0002032!2.76e-18!165;CL:0000837!2.76e-18!165;CL:0002031!4.11e-18!124;CL:0002087!1.21e-16!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.89e-30;33!CL:0002057;1.89e-30;33!CL:0000576;5.94e-26;48!CL:0000473;1.03e-24;39!CL:0000234;1.03e-24;39!CL:0000766;1.39e-20;69!CL:0002087;6.75e-10;104!CL:0000763;7.89e-10;100!CL:0000094;4.45e-09;8!CL:0000738;4.46e-09;136!CL:0002393;2.78e-08;6!CL:0002397;2.78e-08;6!CL:0000081;9.29e-08;11!CL:0000988;6.99e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.10e-49,72;CL:0002009,3.45e-43,61;CL:0000860,3.64e-43,42;CL:0002057,3.64e-43,42;CL:0000557,3.10e-42,67;CL:0000473,3.10e-42,48;CL:0000234,3.10e-42,48;CL:0002194,3.05e-41,59;CL:0000576,3.05e-41,59;CL:0000040,3.05e-41,59;CL:0000559,3.05e-41,59;CL:0000738,4.53e-40,136;CL:0000839,1.98e-39,66;CL:0002087,1.71e-31,115;CL:0000763,1.80e-31,108;CL:0000049,1.80e-31,108;CL:0000037,5.04e-31,168;CL:0002031,5.58e-31,120;CL:0000988,6.50e-30,177;CL:0002032,2.89e-27,161;CL:0000837,2.89e-27,161;CL:0002393,4.82e-11,9;CL:0002397,4.82e-11,9;CL:0000094,5.51e-09,8;CL:0000081,1.15e-07,11;CL:0000840,9.31e-07,5;CL:0001029,9.31e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-30;42!CL:0000049;6.17e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.45e-18!102;UBERON:0003061!1.45e-18!102;UBERON:0001049!9.01e-18!57;UBERON:0005068!9.01e-18!57;UBERON:0006241!9.01e-18!57;UBERON:0007135!9.01e-18!57;UBERON:0007023!1.16e-17!115;UBERON:0002371!3.84e-17!80;UBERON:0002193!1.25e-16!112;UBERON:0001474!1.58e-16!86;UBERON:0001017!1.54e-15!82;UBERON:0002780!1.79e-15!41;UBERON:0001890!1.79e-15!41;UBERON:0006240!1.79e-15!41;UBERON:0004765!2.09e-15!101;UBERON:0001434!2.09e-15!101;UBERON:0002020!6.64e-15!34;UBERON:0003528!6.64e-15!34;UBERON:0001893!1.31e-14!34;UBERON:0003080!1.40e-14!42;UBERON:0002616!2.59e-14!59;UBERON:0002791!3.06e-14!33;UBERON:0005743!4.81e-14!86;UBERON:0000955!6.11e-14!69;UBERON:0006238!6.11e-14!69;UBERON:0001869!2.42e-13!32;UBERON:0000073!5.52e-13!94;UBERON:0001016!5.52e-13!94;UBERON:0002405!6.61e-12!115;UBERON:0003075!1.92e-11!86;UBERON:0007284!1.92e-11!86;UBERON:0002346!2.12e-11!90;UBERON:0000956!7.69e-10!25;UBERON:0000203!7.69e-10!25;UBERON:0002619!1.21e-08!22;UBERON:0003056!2.07e-08!61;UBERON:0001950!1.71e-07!20;UBERON:0002308!8.05e-07!9;UBERON:0000125!8.05e-07!9 | |ontology_enrichment_uberon=UBERON:0002390!1.45e-18!102;UBERON:0003061!1.45e-18!102;UBERON:0001049!9.01e-18!57;UBERON:0005068!9.01e-18!57;UBERON:0006241!9.01e-18!57;UBERON:0007135!9.01e-18!57;UBERON:0007023!1.16e-17!115;UBERON:0002371!3.84e-17!80;UBERON:0002193!1.25e-16!112;UBERON:0001474!1.58e-16!86;UBERON:0001017!1.54e-15!82;UBERON:0002780!1.79e-15!41;UBERON:0001890!1.79e-15!41;UBERON:0006240!1.79e-15!41;UBERON:0004765!2.09e-15!101;UBERON:0001434!2.09e-15!101;UBERON:0002020!6.64e-15!34;UBERON:0003528!6.64e-15!34;UBERON:0001893!1.31e-14!34;UBERON:0003080!1.40e-14!42;UBERON:0002616!2.59e-14!59;UBERON:0002791!3.06e-14!33;UBERON:0005743!4.81e-14!86;UBERON:0000955!6.11e-14!69;UBERON:0006238!6.11e-14!69;UBERON:0001869!2.42e-13!32;UBERON:0000073!5.52e-13!94;UBERON:0001016!5.52e-13!94;UBERON:0002405!6.61e-12!115;UBERON:0003075!1.92e-11!86;UBERON:0007284!1.92e-11!86;UBERON:0002346!2.12e-11!90;UBERON:0000956!7.69e-10!25;UBERON:0000203!7.69e-10!25;UBERON:0002619!1.21e-08!22;UBERON:0003056!2.07e-08!61;UBERON:0001950!1.71e-07!20;UBERON:0002308!8.05e-07!9;UBERON:0000125!8.05e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.20e-18;34!UBERON:0002020;3.20e-18;34!UBERON:0002791;8.47e-18;32!UBERON:0001893;1.14e-17;34!UBERON:0001869;2.63e-17;32!UBERON:0002780;1.58e-16;41!UBERON:0001890;1.58e-16;41!UBERON:0000073;1.03e-14;53!UBERON:0002616;1.03e-14;53!UBERON:0000956;5.37e-13;25!UBERON:0000203;5.37e-13;25!UBERON:0002619;5.59e-12;22!UBERON:0000125;8.68e-12;9!UBERON:0002308;8.68e-12;9!UBERON:0002420;6.90e-11;9!UBERON:0007245;6.90e-11;9!UBERON:0010009;6.90e-11;9!UBERON:0010011;6.90e-11;9!UBERON:0000454;6.90e-11;9!UBERON:0001017;5.91e-10;75!UBERON:0001950;6.33e-10;20!UBERON:0009663;3.12e-09;7!UBERON:0002298;1.52e-08;6!UBERON:0000955;2.81e-08;68!UBERON:0001016;5.29e-08;83 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,3.43483184557268,2.46373965131192,0.87879847716362,0.229240217243854,0.164201178899891,0.0787107813136792,1.18009283054671,2.30297638858328,1.08371286321253,0,0,0,0.46480320348181,0.426507697462265,1.76160263600908,12.7418943962332,15.2413780077308,12.8036413722353,3.80656306207871,0.971680998056939,2.31818010870768,1.45398238779565,3.77875943688809,2.66842467306598,4.88100977501938,4.52284676824008,4.64559556342655,2.01384674625505,1.2808035326455,1.6553756092201,3.44745680736619,3.22742341791913,1.35426486594342,2.07066573496865,2.45615535052061,1.34834090667051,4.59125838556354,3.53021929783703,5.75403413219137,1.9791078011203,4.78712778291916,3.40979800426155,5.80418477257168,2.8369261234557,5.60540024096017,3.01498398308092,2.60741459210101,2.38907729175628,1.81619850790011,2.20966581592539,2.21523671208619,1.26753171787165,2.97646019951061,3.14487968262564,2.02191536063691,4.50530678524519,3.69668849403284,1.99508920618874,2.78483348078726,3.83594722905731,0,0,0,2.56038133539904,0,0.574752439954483,0.661044872784862,0,2.27685187643779,1.17447437874188,3.44045905312706,0,1.12101712596307,0.526768169550154,4.32761494250433,3.53709686474248,2.46721798799411,0,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0.443067789167242,0,0.384273959177026,0.260118695119756,0.328875809207352,0.829050053357545,0.579606171470105,0.296573126324121,0.802622484269139,0,0.339928028092699,0.383220493601921,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0,1.24930726552346,0.236777252044017,0,3.83052812126992,4.01160293675261,6.08262496307756,2.43806866313962,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.486634870302636,1.79616152611729,2.21729397462564,0.43917392846563,0.916853528483988,0.728590576585084,0,1.9472843619281,1.74129737299267,1.59549552622638,3.81584998888547,1.71598473234038,1.48583000531826,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0,1.25019619597712,0,0.337834441449967,0,0,0.183201743930407,3.9534125230819,11.6334079244498,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0.323745888736263,0.421352420106746,0.204154171254893,0.737005903870608,0.206651562351531,0,0.494533858557114,0,0,0.505008341862199,0.625592599359821,0,0.438977620880838,0.30648779579902,0,0.113432183160021,0.717558542755448,0.213557388818567,0.635795703478686,0,0.206105058476878,0.515281080091258,0,0.168776332241266,0.292311015483596,0.504867548488229,0.460249493211497,0.161646056818812,0.355009592516614,0.201504196455281,0.339121184620975,0,0.272746120590835,0,0.365921118388786,0.132529768321485,0.116193942869518,0,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,2.53510069643662,1.96565443335525,0,0.882926198829301,0,0,0.329250856225877,0,0.100528972411631,0.185176890317059,0,0,0,0.231860809950154,0.117408694235822,0,0,0.570762456703795,0,0,3.44703808522356,0,0.743155811443641,0,0.16798212819886,0.283550194484773,0,0,0,0.492663237895943,0.616339038092582,1.4512968087854,1.00883967391873,1.13618190083742,0.126995788584338,0,0,0,0.102827492703324,0,0,0,1.30788020649984,0.1466765716419,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,1.50677127429638,4.21667878966063,0.479249710983165,2.29723871668228,0,0,0.61642896765115,0.179060963239896,0.224170287987055,3.94061520403854,5.39068937148793,6.28880877770767,0.508189248444927,0,1.54657762555539,0,0.637938751653163,3.74503511973591,5.9832291840805,1.65766205374414,0.12269149171914,0,0,0.831883446123229,0.356857977594324,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0.173767228936166,0,1.02943027143257,3.3082884179662,7.33428282783297,1.49418580924822,0,0,0,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0.182091168006717,0.524497659837696,0.451199612907412,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,1.44257416306811,0.732555718546747,0.742585499285292,0,0,0,0.48335359146061,0.616194468458578,0.460511024178389,0.551346289938122,0.429680979473094,0.725083469571143,0.681813019328807,0,0.330569830721956,0.192190067365106,0.510450849978337,0,0,0,0,0,0,0,0,0.143124886741991,1.48863347743867,0,0.571890581771475,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0.354761064070598,0.211107635297664,0.987884678879706,0,0,0,2.01090682660736,0,1.69458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| ||
|short_description=p@chr6:163848296..163848300,+ | |short_description=p@chr6:163848296..163848300,+ | ||
}} | }} |
Latest revision as of 21:57, 30 July 2015
Short description: | p@chr6:163848296..163848300, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:163848296..163848300, + |
Coexpression cluster: | C1279_CD14_Neutrophils_substantia_Eosinophils_optic_globus_thalamus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.10e-49 | 72 |
macrophage dendritic cell progenitor | 3.45e-43 | 61 |
classical monocyte | 3.64e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.64e-43 | 42 |
granulocyte monocyte progenitor cell | 3.10e-42 | 67 |
defensive cell | 3.10e-42 | 48 |
phagocyte | 3.10e-42 | 48 |
monopoietic cell | 3.05e-41 | 59 |
monocyte | 3.05e-41 | 59 |
monoblast | 3.05e-41 | 59 |
promonocyte | 3.05e-41 | 59 |
leukocyte | 4.53e-40 | 136 |
myeloid lineage restricted progenitor cell | 1.98e-39 | 66 |
nongranular leukocyte | 1.71e-31 | 115 |
myeloid cell | 1.80e-31 | 108 |
common myeloid progenitor | 1.80e-31 | 108 |
hematopoietic stem cell | 5.04e-31 | 168 |
hematopoietic lineage restricted progenitor cell | 5.58e-31 | 120 |
hematopoietic cell | 6.50e-30 | 177 |
hematopoietic oligopotent progenitor cell | 2.89e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.89e-27 | 161 |
intermediate monocyte | 4.82e-11 | 9 |
CD14-positive, CD16-positive monocyte | 4.82e-11 | 9 |
granulocyte | 5.51e-09 | 8 |
blood cell | 1.15e-07 | 11 |
immature conventional dendritic cell | 9.31e-07 | 5 |
common dendritic progenitor | 9.31e-07 | 5 |