FFCP PHASE1:Hg19::chr6:163910016..163910030,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:163910016..163910030,+ | |||
|coexpression_cluster_id=C1279 | |||
|description=CAGE_peak_at_chr6:163910016..163910030,+ | |||
|id=chr6:163910016..163910030,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.82e-20!76;CL:0002057!2.70e-18!42;CL:0002009!1.56e-17!65;CL:0000557!6.54e-17!71;CL:0000738!1.44e-16!140;CL:0002194!1.72e-16!63;CL:0000576!1.72e-16!63;CL:0000040!1.72e-16!63;CL:0000559!1.72e-16!63;CL:0000860!2.14e-16!45;CL:0000839!2.63e-15!70;CL:0000763!7.70e-15!112;CL:0000049!7.70e-15!112;CL:0000037!2.19e-13!172;CL:0000566!2.19e-13!172;CL:0002087!1.26e-12!119;CL:0000988!1.46e-12!182;CL:0002032!3.16e-12!165;CL:0000837!3.16e-12!165;CL:0002031!4.14e-12!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-15;33!CL:0002057;2.63e-15;33!CL:0000473;1.33e-13;39!CL:0000234;1.33e-13;39!CL:0000576;2.63e-12;48!CL:0000766;1.70e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.25e-21,72;CL:0002009,1.21e-20,61;CL:0000557,2.93e-19,67;CL:0002194,1.44e-18,59;CL:0000576,1.44e-18,59;CL:0000040,1.44e-18,59;CL:0000559,1.44e-18,59;CL:0000738,1.97e-18,136;CL:0000473,2.04e-18,48;CL:0000234,2.04e-18,48;CL:0000860,3.65e-18,42;CL:0002057,3.65e-18,42;CL:0000839,6.60e-17,66;CL:0000763,1.22e-14,108;CL:0000049,1.22e-14,108;CL:0002087,2.30e-14,115;CL:0000037,8.69e-14,168;CL:0002031,4.20e-13,120;CL:0000988,2.12e-12,177;CL:0002032,9.75e-12,161;CL:0000837,9.75e-12,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.08e-17!57;UBERON:0005068!1.08e-17!57;UBERON:0006241!1.08e-17!57;UBERON:0007135!1.08e-17!57;UBERON:0002616!4.52e-15!59;UBERON:0002371!1.77e-14!80;UBERON:0001474!2.41e-14!86;UBERON:0000955!2.62e-14!69;UBERON:0006238!2.62e-14!69;UBERON:0003080!9.95e-14!42;UBERON:0002020!1.01e-13!34;UBERON:0003528!1.01e-13!34;UBERON:0007023!1.38e-13!115;UBERON:0001893!2.17e-13!34;UBERON:0002390!2.41e-13!102;UBERON:0003061!2.41e-13!102;UBERON:0001017!2.46e-13!82;UBERON:0002780!3.16e-13!41;UBERON:0001890!3.16e-13!41;UBERON:0006240!3.16e-13!41;UBERON:0002791!5.03e-13!33;UBERON:0002346!1.89e-12!90;UBERON:0001869!4.31e-12!32;UBERON:0005743!4.47e-12!86;UBERON:0003075!7.43e-12!86;UBERON:0007284!7.43e-12!86;UBERON:0002193!7.45e-12!112;UBERON:0002405!1.88e-11!115;UBERON:0000073!5.70e-11!94;UBERON:0001016!5.70e-11!94;UBERON:0004765!6.02e-11!101;UBERON:0001434!6.02e-11!101;UBERON:0000956!5.42e-10!25;UBERON:0000203!5.42e-10!25;UBERON:0002619!1.25e-08!22;UBERON:0003056!1.11e-07!61;UBERON:0001950!2.07e-07!20;UBERON:0000033!4.10e-07!123;UBERON:0000153!6.31e-07!129;UBERON:0007811!6.31e-07!129;UBERON:0002298!9.04e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.71e-15;41!UBERON:0001890;7.71e-15;41!UBERON:0002791;3.10e-14;32!UBERON:0003528;3.15e-14;34!UBERON:0002020;3.15e-14;34!UBERON:0000073;1.58e-13;53!UBERON:0002616;1.58e-13;53!UBERON:0001893;3.60e-13;34!UBERON:0001869;1.06e-12;32!UBERON:0000956;4.16e-12;25!UBERON:0000203;4.16e-12;25!UBERON:0002298;1.76e-11;6!UBERON:0002619;1.73e-10;22!UBERON:0001950;4.16e-08;20!UBERON:0000125;1.28e-07;9!UBERON:0002308;1.28e-07;9!UBERON:0002420;4.05e-07;9!UBERON:0007245;4.05e-07;9!UBERON:0010009;4.05e-07;9!UBERON:0010011;4.05e-07;9!UBERON:0000454;4.05e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.44e-25,56;UBERON:0005068,8.44e-25,56;UBERON:0006241,8.44e-25,56;UBERON:0007135,8.44e-25,56;UBERON:0000073,2.52e-21,53;UBERON:0002616,2.52e-21,53;UBERON:0003528,4.91e-18,34;UBERON:0002020,4.91e-18,34;UBERON:0003075,9.19e-18,82;UBERON:0007284,9.19e-18,82;UBERON:0002346,1.41e-17,86;UBERON:0002780,2.02e-17,41;UBERON:0001890,2.02e-17,41;UBERON:0003080,2.02e-17,41;UBERON:0006240,2.02e-17,41;UBERON:0002371,4.48e-17,76;UBERON:0001893,6.05e-16,34;UBERON:0002791,2.66e-15,32;UBERON:0002390,3.37e-15,98;UBERON:0003061,3.37e-15,98;UBERON:0001474,3.91e-15,82;UBERON:0000955,1.96e-14,68;UBERON:0006238,1.96e-14,68;UBERON:0001017,5.53e-14,81;UBERON:0002193,1.10e-13,108;UBERON:0001869,2.30e-13,32;UBERON:0002405,3.88e-13,93;UBERON:0004765,5.74e-13,90;UBERON:0001016,7.75e-13,89;UBERON:0000956,5.10e-12,25;UBERON:0000203,5.10e-12,25;UBERON:0010371,6.41e-12,104;UBERON:0001434,1.17e-11,100;UBERON:0002298,1.91e-11,6;UBERON:0003056,7.27e-11,61;UBERON:0010314,9.31e-11,132;UBERON:0002619,1.46e-10,22;UBERON:0007023,5.36e-10,114;UBERON:0003076,1.26e-08,15;UBERON:0003057,1.26e-08,15;UBERON:0001950,3.92e-08,20;UBERON:0000125,9.56e-08,9;UBERON:0002308,9.56e-08,9;UBERON:0002420,1.89e-07,9;UBERON:0007245,1.89e-07,9;UBERON:0010009,1.89e-07,9;UBERON:0010011,1.89e-07,9;UBERON:0000454,1.89e-07,9 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0.85870796139317,2.18999080116615,1.00434111675842,0.152826811495903,0.164201178899891,0.157421562627358,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0,8.86392653651004,17.2468224824322,9.54847831149748,3.13481663935894,0.971680998056939,1.03030227053675,2.32637182047304,0,1.21292030593908,1.16214518452842,3.28934310417461,2.47765096716083,0.863077176966451,1.5369642391746,0.47296445977717,1.37898272294647,5.16387746867061,1.35426486594342,1.12945403725563,0.545812300115692,0.898893937780338,0.612167784741805,1.60464513538047,2.55734850319616,1.9791078011203,1.59570926097305,0.852449501065388,0.870627715885752,0.56738522469114,3.11411124497787,2.26123798731069,1.0429658368404,0.217188844705117,0.605399502633369,1.10483290796269,4.1140110367315,0.422510572623884,0.425208599930087,0.838634582033504,0.22465726229299,1.65194582125657,1.76798145366788,0.855038231223746,0.19891667719909,0.91332076882317,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,1.32171328579026,0,0.263384084775077,1.7703879310245,3.14408610199332,0.616804496998528,0,0,0.473447805734733,0,0,0.589211814949674,0,0,0.25618263945135,0.260118695119756,0.493313713811028,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0.950452044448374,0.301150238155546,0,0,0,0,1.41124720257313,2.67440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.43917392846563,0.261958150995425,0,0.370784442784429,1.29818957461873,0.696518949197069,0.664789802594326,2.14641561874808,1.14398982156026,0.74291500265913,0.198762407366705,0,0,0,0,0,0,0.258416759169329,1.06729878806013,0,0,0,0,0,0,0.625098097988558,0.898117490504679,0.225222960966644,0,0,0,1.31780417436063,7.75560528296651,0.436094052142534,0.496971951695318,0.12663051166458,0,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0.408308342509787,0.245668634623536,0,0,0.494533858557114,0,0,0.841680569770331,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,2.95460407304877,0,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.414656231081544,1.15295962733569,0.50496973370552,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,1.41849132023278,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0.502257091432126,4.21667878966063,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,1.37921532141349,3.23441362289276,1.54011643535698,0,0,0,0,0,1.49801404789436,17.9496875522415,1.24324654030811,0.12269149171914,0,0,0,0,0,0.35142424497814,0.300946099727719,0,0,1.32845119707087,0,0.173767228936166,0.195801157462741,0,1.6541442089831,6.68714022537712,1.70764092485511,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,0.40101294060657,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0.183138929636687,0.495056999523528,0,0,0,0.386682873168488,0,0.15350367472613,0.275673144969061,0.214840489736547,0.145016693914229,0.170453254832202,0.178064071293475,0,0.384380134730212,0.382838137483752,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,1.03558180854457,0.43050537267123,0,0,0,0,0,0,0.476463550915578,0,0.648473311192717,0,1.58625035258854,0.320472213382419,0,0,0,0,0.284567373393656,0.318852545457645,0,0,0.211673582723883,0,0,0.456469358066384,0.313359791546046,0,0.338583555603207,0.321176150207399,0.403599414382095,1.27753871307098,0,0.614481528616916,0,0,0,0,0,0.270455678475983,0.66614393599564,0,0.18714054040822,0.146508179271894,0.485442086998054,0.111443384277478,0.284136146806413,0,0,0,1.9882952955326,2.67271891179974,0.556543525114529,0.329607748453519,0,0.597743964753209,0,0,0.306806047506464,0.123084805461069,0,0.269605053441981,0,1.02314474045374,0.493217028184668,0,0,0.969332746095218,0.556608588971108,0,0,0,1.44999915086959,0.227586896570999,0,0.236387681767936,0,0.291604613383254,0.520874984799877,0,1.68835014075571,0,0.442317039724898,0.295547618953547,0.658156191461918,0,0,0.384751292518985,0.455768223388005,0.69169171316418,0.448788222048861,1.19512109114209,0.638002319463839,0,0,0,0.470940769185074,0,0.225595660617181,0.19606253431774,0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| |||
|short_description=p@chr6:163910016..163910030,+ | |||
}} |
Latest revision as of 21:57, 30 July 2015
Short description: | p@chr6:163910016..163910030, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:163910016..163910030, + |
Coexpression cluster: | C1279_CD14_Neutrophils_substantia_Eosinophils_optic_globus_thalamus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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myeloid leukocyte | 1.25e-21 | 72 |
macrophage dendritic cell progenitor | 1.21e-20 | 61 |
granulocyte monocyte progenitor cell | 2.93e-19 | 67 |
monopoietic cell | 1.44e-18 | 59 |
monocyte | 1.44e-18 | 59 |
monoblast | 1.44e-18 | 59 |
promonocyte | 1.44e-18 | 59 |
leukocyte | 1.97e-18 | 136 |
defensive cell | 2.04e-18 | 48 |
phagocyte | 2.04e-18 | 48 |
classical monocyte | 3.65e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.65e-18 | 42 |
myeloid lineage restricted progenitor cell | 6.60e-17 | 66 |
myeloid cell | 1.22e-14 | 108 |
common myeloid progenitor | 1.22e-14 | 108 |
nongranular leukocyte | 2.30e-14 | 115 |
hematopoietic stem cell | 8.69e-14 | 168 |
hematopoietic lineage restricted progenitor cell | 4.20e-13 | 120 |
hematopoietic cell | 2.12e-12 | 177 |
hematopoietic oligopotent progenitor cell | 9.75e-12 | 161 |
hematopoietic multipotent progenitor cell | 9.75e-12 | 161 |