FFCP PHASE1:Hg19::chr7:100145844..100145868,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100145844..100145868,+ to FFCP PHASE1:Hg19::chr7:100145844..100145868,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:100145844..100145868,+ | |||
|description=CAGE_peak_at_chr7:100145844..100145868,+ | |||
|id=chr7:100145844..100145868,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.45e-20!24;CL:0000115!3.43e-18!35;CL:0002078!2.61e-15!44;CL:0000071!3.32e-15!18;CL:0002546!3.32e-15!18;CL:0000213!1.45e-13!57;CL:0000215!1.45e-13!57;CL:0000222!2.37e-09!119;CL:1000413!2.95e-08!9;CL:0005020!6.09e-07!6;CL:0002138!6.09e-07!6;CL:0005022!6.09e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.03e-34;24!CL:0000115;1.39e-25;36!CL:0000071;3.41e-24;18!CL:0002078;5.89e-16;45!CL:1000413;5.00e-14;9!CL:0000213;9.26e-12;58!CL:0000215;9.26e-12;58!CL:0002138;1.03e-11;6!CL:0002543;5.61e-10;6!CL:0002544;8.48e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.01e-34,24;CL:0000115,2.27e-30,36;CL:0002078,8.77e-25,45;CL:0000071,1.16e-24,18;CL:0002546,1.16e-24,18;CL:0000213,9.78e-19,58;CL:0000215,9.78e-19,58;CL:1000413,3.62e-14,9;CL:0005020,1.06e-11,6;CL:0002138,1.06e-11,6;CL:0005022,1.06e-11,6;CL:0002543,2.32e-10,6;CL:0002544,7.81e-10,6;CL:0000222,3.08e-08,121 | |||
|ontology_enrichment_development_v019=CL:0002546;3.41e-24;18!CL:0005022;1.03e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.45e-38!115;UBERON:0000477!4.19e-32!286;UBERON:0004111!1.04e-29!241;UBERON:0000025!6.27e-27!194;UBERON:0001049!1.84e-25!57;UBERON:0005068!1.84e-25!57;UBERON:0006241!1.84e-25!57;UBERON:0007135!1.84e-25!57;UBERON:0002616!5.52e-25!59;UBERON:0001017!8.77e-24!82;UBERON:0005743!1.85e-23!86;UBERON:0000955!1.37e-22!69;UBERON:0006238!1.37e-22!69;UBERON:0000073!5.41e-21!94;UBERON:0001016!5.41e-21!94;UBERON:0000119!6.36e-21!312;UBERON:0003075!5.05e-20!86;UBERON:0007284!5.05e-20!86;UBERON:0000483!5.46e-20!309;UBERON:0002346!1.08e-19!90;UBERON:0003080!9.72e-19!42;UBERON:0002780!5.81e-18!41;UBERON:0001890!5.81e-18!41;UBERON:0006240!5.81e-18!41;UBERON:0001986!3.32e-15!18;UBERON:0004638!3.32e-15!18;UBERON:0004852!3.32e-15!18;UBERON:0002020!8.47e-14!34;UBERON:0003528!8.47e-14!34;UBERON:0000153!1.12e-13!129;UBERON:0007811!1.12e-13!129;UBERON:0001893!1.24e-13!34;UBERON:0002791!2.22e-13!33;UBERON:0003056!2.26e-13!61;UBERON:0000033!3.00e-13!123;UBERON:0000487!1.92e-12!22;UBERON:0001869!2.80e-12!32;UBERON:0000481!7.37e-12!347;UBERON:0006914!4.66e-11!25;UBERON:0000468!4.95e-10!659;UBERON:0000924!7.68e-10!173;UBERON:0006601!7.68e-10!173;UBERON:0004121!8.77e-10!169;UBERON:0002049!1.26e-09!79;UBERON:0007798!1.26e-09!79;UBERON:0001009!3.89e-09!113;UBERON:0000467!3.98e-09!625;UBERON:0000480!5.06e-09!626;UBERON:0000475!6.85e-09!365;UBERON:0004535!7.40e-09!110;UBERON:0000922!1.07e-08!612;UBERON:0002050!1.36e-08!605;UBERON:0005423!1.36e-08!605;UBERON:0000956!1.57e-08!25;UBERON:0000203!1.57e-08!25;UBERON:0003914!1.92e-08!118;UBERON:0000923!2.38e-08!604;UBERON:0005291!2.38e-08!604;UBERON:0006598!2.38e-08!604;UBERON:0002532!2.38e-08!604;UBERON:0003915!2.95e-08!9;UBERON:0004700!2.95e-08!9;UBERON:0001917!2.95e-08!9;UBERON:0000055!3.31e-08!69;UBERON:0003076!6.62e-08!15;UBERON:0003057!6.62e-08!15;UBERON:0002619!1.27e-07!22;UBERON:0000490!1.61e-07!138;UBERON:0002368!1.79e-07!35;UBERON:0004872!1.94e-07!84;UBERON:0002308!2.79e-07!9;UBERON:0000125!2.79e-07!9;UBERON:0002465!2.97e-07!10;UBERON:0004732!5.40e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.41e-24;18!UBERON:0001986;3.41e-24;18!UBERON:0004852;3.41e-24;18!UBERON:0000487;6.66e-19;22!UBERON:0006914;4.63e-16;25!UBERON:0003915;5.00e-14;9!UBERON:0004700;5.00e-14;9!UBERON:0001917;5.00e-14;9!UBERON:0001473;3.99e-11;8!UBERON:0004536;3.99e-11;8!UBERON:0006558;3.99e-11;8!UBERON:0002465;6.01e-11;10!UBERON:0000490;2.70e-10;33!UBERON:0011135;4.97e-09;5!UBERON:0002216;4.97e-09;5!UBERON:0011134;4.97e-09;5!UBERON:0002209;4.97e-09;5!UBERON:0002213;4.97e-09;5!UBERON:0007844;4.97e-09;5!UBERON:0011138;4.97e-09;5!UBERON:0001130;4.97e-09;5!UBERON:0001066;4.97e-09;5!UBERON:0001468;4.97e-09;5!UBERON:0002780;8.64e-09;41!UBERON:0001890;8.64e-09;41!UBERON:0000055;1.14e-08;65!UBERON:0001638;1.87e-08;9!UBERON:0003920;1.87e-08;9!UBERON:0004582;1.87e-08;9!UBERON:0002368;7.86e-08;33!UBERON:0002420;6.62e-07;9!UBERON:0007245;6.62e-07;9!UBERON:0010009;6.62e-07;9!UBERON:0010011;6.62e-07;9!UBERON:0000454;6.62e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.16e-24,18;UBERON:0001986,1.16e-24,18;UBERON:0004852,1.16e-24,18;UBERON:0004111,3.42e-21,240;UBERON:0000487,2.83e-19,22;UBERON:0007023,2.96e-19,114;UBERON:0000025,1.16e-18,192;UBERON:0006914,2.22e-16,25;UBERON:0003915,3.62e-14,9;UBERON:0004700,3.62e-14,9;UBERON:0001917,3.62e-14,9;UBERON:0000055,5.70e-13,68;UBERON:0004535,2.88e-12,109;UBERON:0002049,2.92e-12,78;UBERON:0007798,2.92e-12,78;UBERON:0001009,1.13e-11,112;UBERON:0004872,2.62e-11,83;UBERON:0001473,3.17e-11,8;UBERON:0004536,3.17e-11,8;UBERON:0006558,3.17e-11,8;UBERON:0002465,4.80e-11,10;UBERON:0003914,1.05e-10,117;UBERON:0000119,2.68e-10,309;UBERON:0002780,3.92e-10,41;UBERON:0001890,3.92e-10,41;UBERON:0003080,3.92e-10,41;UBERON:0006240,3.92e-10,41;UBERON:0001049,4.16e-10,56;UBERON:0005068,4.16e-10,56;UBERON:0006241,4.16e-10,56;UBERON:0007135,4.16e-10,56;UBERON:0000483,4.81e-10,306;UBERON:0000073,1.01e-09,53;UBERON:0002616,1.01e-09,53;UBERON:0011135,2.95e-09,5;UBERON:0002216,2.95e-09,5;UBERON:0011134,2.95e-09,5;UBERON:0002209,2.95e-09,5;UBERON:0002213,2.95e-09,5;UBERON:0005856,2.95e-09,5;UBERON:0005866,2.95e-09,5;UBERON:0005863,2.95e-09,5;UBERON:0007844,2.95e-09,5;UBERON:0011138,2.95e-09,5;UBERON:0001130,2.95e-09,5;UBERON:0001066,2.95e-09,5;UBERON:0001468,2.95e-09,5;UBERON:0001638,1.31e-08,9;UBERON:0003920,1.31e-08,9;UBERON:0004582,1.31e-08,9;UBERON:0002368,4.01e-08,35;UBERON:0000955,8.01e-08,68;UBERON:0006238,8.01e-08,68;UBERON:0007500,1.19e-07,59;UBERON:0001981,1.19e-07,59;UBERON:0004537,1.19e-07,59;UBERON:0006965,1.19e-07,59;UBERON:0001017,2.72e-07,81;UBERON:0011216,3.42e-07,223;UBERON:0010314,4.27e-07,132;UBERON:0002420,6.89e-07,9;UBERON:0007245,6.89e-07,9;UBERON:0010009,6.89e-07,9;UBERON:0010011,6.89e-07,9;UBERON:0000454,6.89e-07,9;UBERON:0001893,9.77e-07,34;UBERON:0001016,9.80e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,2.35156070624089,1.65698687863958,0,0,0,0,0.246242116153576,0.816002764977012,0.940364164434263,0.85870796139317,0.136874425072884,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,3.35350429851818,0.255725123687061,0,0,0,0,0,0.378139268656271,0,0.351339142772504,0.982343066232845,0,0,0,0,0,0,0,0,1.19257444420023,1.72046919021225,2.42998351125316,2.26123176769604,5.03399323451887,1.6507082516404,1.67195973229448,2.06733407335463,4.98072767761394,3.68192674041137,4.02829317109147,0.760272105718513,5.6134273236079,2.94130464276695,1.62028389576352,5.89378206674926,3.36794058939255,1.91439516821648,1.53316637465883,1.89853131913626,1.64881569537367,0,0,0,0,0.25326102332916,0,1.14734648299525,0,0,0,0,6.22422070799533,2.69421344139376,3.43269996538263,2.57307626996383,1.15235184896,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,1.82032272387605,0,0,0.125118519871964,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11971000087113,2.80483547606892,1.2347220339942,1.47008711385542,0,10.8110993834539,8.86184860022106,0,0,0.171567810298526,0,0,0,0,0,0,0,0.463721619900307,0,4.18662698507114,3.70388410061289,4.37584550139576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,1.30788020649984,0.07333828582095,0,3.57656445851882,0,0,0,0.257207374262142,0,0,0.857867961948885,6.51145926469732,0,0,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,3.92612773501248,5.50187573165645,1.89885516589815,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,3.91602314925481,4.46086450954113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,2.27466768141793,0.340187410553031,0.431831832204279,6.16909010761157,0,0,0,0,0,0,0,0,0.328014645699706,0,2.57602529119306,0,0,0,0,0,0.290012154876366,0.462145851343933,1.22802939780904,0.275673144969061,4.61907052933577,3.0453505721988,0.170453254832202,0.534192213880424,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0,0,0,0,0,0,3.37606599385231,0,0.16480387422676,0,0.996239941255349,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.649376687132959,0,0,0,2.89999830173917,0,0,0,0,0,0,2.65722415744152,2.05013945663194,0,0.442317039724898,0.295547618953547,0.658156191461918,0,0,1.23120413606075,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.796118080530053,0,0,0,0.104421949505455,1.34802265961354,0,0.937057782901357,0,0,0,0.394584402849391,2.41981432097328,0,3.85438135733777,0,0,0,0,0.313932918407225,0,0,0,0,0,0,1.39781334593624,0,0,0,0,1.26085721434945,0.0882561266915003,0.451961481561065,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0.313808538937,0,0.288950589901519,1.80126086612937,3.01191833562385,0,0.429765441419957,0,0.837847203816763,0,0,0,0.429226048136571,0.223171457441873,1.74677028465488,0,0,0,0,0,0.688992370603241,0,0.795229689809303,3.94989877723569,0,0,0,0,0,0.242998226632099,0,1.89133697518076,2.15063811353492,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0.453248366080503,3.22414914091781,2.65013777824443,0.775697738169303,0.92562821219883,0.171086837884329,0,1.28144895081234,6.13096789888697,0.828478110694391,1.48849806543585,0,0,0,0,0.5013797880454,0,0,0,0.886068179966986,0.366078794705889,4.13130071331449,1.14681839138014,2.66229723688445,1.92498849118289,0,0.124980407962107,0,0,0,0,0,0.298509605773748,0,0,0.378806010550178,0.251567901752575,0,0,0.151230923763239,0,0,0,0.899606224327209,0.155262956876259,0,0,0,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,1.01024846629776,0,0,6.6476893326227,0,0,0,0.244736704506468,0,0,0.657852148736121,0,0.192914038270915,1.68942440653073,0,0.345430341731199,0,2.90342715918635,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.385375350578757,1.41696576325585,1.59633859057151,0,0,0.553258019713743,0.322951291263702,5.71077681036618,0,0,0,0,0,0,0,20.9084712810935,0.20170506870352,2.34454203369928,0,0.49131575253029,0,0.202612753855184,0.781078098613847,1.86018116851066,0.19024743058172,0,3.28954660114309,0.992422356778588,0.351742488719241,0,0.535701835878287,1.00885116665647,1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| ||
|short_description=p@chr7:100145844..100145868,+ | |||
}} | }} |
Latest revision as of 04:03, 31 July 2015
Short description: | p@chr7:100145844..100145868, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100145844..100145868, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.01e-34 | 24 |
endothelial cell | 2.27e-30 | 36 |
meso-epithelial cell | 8.77e-25 | 45 |
blood vessel endothelial cell | 1.16e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.16e-24 | 18 |
lining cell | 9.78e-19 | 58 |
barrier cell | 9.78e-19 | 58 |
endothelial cell of artery | 3.62e-14 | 9 |
lymphangioblast | 1.06e-11 | 6 |
endothelial cell of lymphatic vessel | 1.06e-11 | 6 |
vascular lymphangioblast | 1.06e-11 | 6 |
vein endothelial cell | 2.32e-10 | 6 |
aortic endothelial cell | 7.81e-10 | 6 |
mesodermal cell | 3.08e-08 | 121 |