FFCP PHASE1:Mm9::chr2:158209586..158209595,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=904|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:158209586..158209595,+|id=chr2:158209586..158209595,+|ontology_enrichment_celltype=CL:0000117!2.02e-10!23;CL:0000337!2.02e-10!23;CL:0000540!6.78e-07!33;CL:0000047!6.78e-07!33;CL:0000031!6.78e-07!33;CL:0000404!6.78e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.76e-15,23;CL:0000337,2.76e-15,23;CL:0002610,1.26e-12,3;CL:0002614,1.50e-12,3;CL:0000540,3.90e-10,33;CL:0000047,3.90e-10,33;CL:0000031,3.90e-10,33;CL:0000404,3.90e-10,33;CL:0000393,2.58e-08,39;CL:0000211,2.58e-08,39;CL:0002611,7.44e-08,2;CL:0002319,2.21e-07,43;CL:0000221,3.55e-07,44;CL:0000133,3.55e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.69e-21!63;UBERON:0001049!1.27e-19!52;UBERON:0005068!1.27e-19!52;UBERON:0006241!1.27e-19!52;UBERON:0007135!1.27e-19!52;UBERON:0002020!2.24e-18!34;UBERON:0000073!4.34e-18!75;UBERON:0001016!4.34e-18!75;UBERON:0000955!6.39e-18!50;UBERON:0006238!6.39e-18!50;UBERON:0001017!6.40e-18!73;UBERON:0005743!6.40e-18!73;UBERON:0002346!1.91e-17!71;UBERON:0003075!1.91e-17!71;UBERON:0007284!1.91e-17!71;UBERON:0002616!5.09e-17!49;UBERON:0004121!1.34e-16!102;UBERON:0000924!1.34e-16!102;UBERON:0006601!1.34e-16!102;UBERON:0003056!5.86e-14!49;UBERON:0002021!2.13e-13!10;UBERON:0000411!2.13e-13!10;UBERON:0001950!2.13e-13!10;UBERON:0007811!3.84e-13!86;UBERON:0002791!3.86e-13!29;UBERON:0003528!3.86e-13!29;UBERON:0001893!3.86e-13!29;UBERON:0003080!1.63e-11!40;UBERON:0000153!4.78e-11!94;UBERON:0002780!1.23e-10!39;UBERON:0001890!1.23e-10!39;UBERON:0006240!1.23e-10!39;UBERON:0003076!8.10e-10!12;UBERON:0003057!8.10e-10!12;UBERON:0002298!1.07e-08!6;UBERON:0002240!3.11e-08!6;UBERON:0005174!3.11e-08!6;UBERON:0001137!3.11e-08!6;UBERON:0002619!3.83e-08!17;UBERON:0002420!6.13e-08!8;UBERON:0007245!6.13e-08!8;UBERON:0010009!6.13e-08!8;UBERON:0010011!6.13e-08!8;UBERON:0000454!6.13e-08!8;UBERON:0001948!2.64e-07!5;UBERON:0002315!2.64e-07!5;UBERON:0000956!2.78e-07!21;UBERON:0001869!2.78e-07!21;UBERON:0000203!2.78e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.45e-33,54;UBERON:0002020,7.34e-29,34;UBERON:0002021,1.83e-28,10;UBERON:0000411,1.83e-28,10;UBERON:0001950,1.83e-28,10;UBERON:0001049,2.71e-25,52;UBERON:0005068,2.71e-25,52;UBERON:0006241,2.71e-25,52;UBERON:0007135,2.71e-25,52;UBERON:0001017,1.02e-23,73;UBERON:0001016,5.46e-23,75;UBERON:0002346,6.68e-20,64;UBERON:0003075,6.68e-20,64;UBERON:0007284,6.68e-20,64;UBERON:0003528,1.51e-19,29;UBERON:0002791,1.51e-19,29;UBERON:0001893,1.51e-19,29;UBERON:0003080,2.36e-18,40;UBERON:0002616,7.93e-18,46;UBERON:0000955,2.19e-17,47;UBERON:0006238,2.19e-17,47;UBERON:0004121,2.28e-17,95;UBERON:0000924,2.28e-17,95;UBERON:0006601,2.28e-17,95;UBERON:0010371,5.14e-17,73;UBERON:0002780,2.39e-16,39;UBERON:0001890,2.39e-16,39;UBERON:0006240,2.39e-16,39;UBERON:0002619,3.39e-16,17;UBERON:0002950,8.70e-16,4;UBERON:0001891,8.70e-16,4;UBERON:0009616,8.70e-16,4;UBERON:0010286,8.70e-16,4;UBERON:0003056,1.79e-14,49;UBERON:0000956,7.51e-13,21;UBERON:0001869,7.51e-13,21;UBERON:0000203,7.51e-13,21;UBERON:0010314,9.11e-13,92;UBERON:0004684,1.26e-12,3;UBERON:0002275,1.26e-12,3;UBERON:0002038,1.50e-12,3;UBERON:0009663,1.50e-12,3;UBERON:0009661,1.50e-12,3;UBERON:0000125,1.50e-12,3;UBERON:0002308,1.50e-12,3;UBERON:0001948,3.03e-12,5;UBERON:0002315,3.03e-12,5;UBERON:0002240,3.17e-10,6;UBERON:0005174,3.17e-10,6;UBERON:0001137,3.17e-10,6;UBERON:0000025,1.32e-09,114;UBERON:0004111,9.80e-09,122;UBERON:0002420,4.93e-08,8;UBERON:0007245,4.93e-08,8;UBERON:0010009,4.93e-08,8;UBERON:0010011,4.93e-08,8;UBERON:0000454,4.93e-08,8;UBERON:0002256,7.44e-08,2;UBERON:0003076,1.64e-07,12;UBERON:0003057,1.64e-07,12|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.10434270475807,0,0,0,7.70811166995721,2.042997409363,3.07213066512487,0.263772575460388,0.548925861614458,0.52091337055676,1.67509799400829,7.31591393041184,5.04234217663473,4.71405736757868,3.98640706237488,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.25668024088073,0,0,0,0,1.49790639404823,1.83000241127451,0,0.869121600961382,1.53429274398198,0.62336413367868,1.94689515681309,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,1.3748254587495,0.685082519770642,2.2661816921691,1.35004500046361,2.70192721934532,1.35942722695261,3.62432218226274,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.824171801606613,0.294397840268795,0.685738504770831,0.532427418478012,0.476872379894642,0.145346416632329,0.376437521661322,0.25384382367503,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr2:158209586..158209595,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=904 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:158209586..158209595,+ | |||
|description=CAGE_peak_at_chr2:158209586..158209595,+ | |||
|id=chr2:158209586..158209595,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.02e-10!23;CL:0000337!2.02e-10!23;CL:0000540!6.78e-07!33;CL:0000047!6.78e-07!33;CL:0000031!6.78e-07!33;CL:0000404!6.78e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.76e-15,23;CL:0000337,2.76e-15,23;CL:0002610,1.26e-12,3;CL:0002614,1.50e-12,3;CL:0000540,3.90e-10,33;CL:0000047,3.90e-10,33;CL:0000031,3.90e-10,33;CL:0000404,3.90e-10,33;CL:0000393,2.58e-08,39;CL:0000211,2.58e-08,39;CL:0002611,7.44e-08,2;CL:0002319,2.21e-07,43;CL:0000221,3.55e-07,44;CL:0000133,3.55e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.69e-21!63;UBERON:0001049!1.27e-19!52;UBERON:0005068!1.27e-19!52;UBERON:0006241!1.27e-19!52;UBERON:0007135!1.27e-19!52;UBERON:0002020!2.24e-18!34;UBERON:0000073!4.34e-18!75;UBERON:0001016!4.34e-18!75;UBERON:0000955!6.39e-18!50;UBERON:0006238!6.39e-18!50;UBERON:0001017!6.40e-18!73;UBERON:0005743!6.40e-18!73;UBERON:0002346!1.91e-17!71;UBERON:0003075!1.91e-17!71;UBERON:0007284!1.91e-17!71;UBERON:0002616!5.09e-17!49;UBERON:0004121!1.34e-16!102;UBERON:0000924!1.34e-16!102;UBERON:0006601!1.34e-16!102;UBERON:0003056!5.86e-14!49;UBERON:0002021!2.13e-13!10;UBERON:0000411!2.13e-13!10;UBERON:0001950!2.13e-13!10;UBERON:0007811!3.84e-13!86;UBERON:0002791!3.86e-13!29;UBERON:0003528!3.86e-13!29;UBERON:0001893!3.86e-13!29;UBERON:0003080!1.63e-11!40;UBERON:0000153!4.78e-11!94;UBERON:0002780!1.23e-10!39;UBERON:0001890!1.23e-10!39;UBERON:0006240!1.23e-10!39;UBERON:0003076!8.10e-10!12;UBERON:0003057!8.10e-10!12;UBERON:0002298!1.07e-08!6;UBERON:0002240!3.11e-08!6;UBERON:0005174!3.11e-08!6;UBERON:0001137!3.11e-08!6;UBERON:0002619!3.83e-08!17;UBERON:0002420!6.13e-08!8;UBERON:0007245!6.13e-08!8;UBERON:0010009!6.13e-08!8;UBERON:0010011!6.13e-08!8;UBERON:0000454!6.13e-08!8;UBERON:0001948!2.64e-07!5;UBERON:0002315!2.64e-07!5;UBERON:0000956!2.78e-07!21;UBERON:0001869!2.78e-07!21;UBERON:0000203!2.78e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.45e-33,54;UBERON:0002020,7.34e-29,34;UBERON:0002021,1.83e-28,10;UBERON:0000411,1.83e-28,10;UBERON:0001950,1.83e-28,10;UBERON:0001049,2.71e-25,52;UBERON:0005068,2.71e-25,52;UBERON:0006241,2.71e-25,52;UBERON:0007135,2.71e-25,52;UBERON:0001017,1.02e-23,73;UBERON:0001016,5.46e-23,75;UBERON:0002346,6.68e-20,64;UBERON:0003075,6.68e-20,64;UBERON:0007284,6.68e-20,64;UBERON:0003528,1.51e-19,29;UBERON:0002791,1.51e-19,29;UBERON:0001893,1.51e-19,29;UBERON:0003080,2.36e-18,40;UBERON:0002616,7.93e-18,46;UBERON:0000955,2.19e-17,47;UBERON:0006238,2.19e-17,47;UBERON:0004121,2.28e-17,95;UBERON:0000924,2.28e-17,95;UBERON:0006601,2.28e-17,95;UBERON:0010371,5.14e-17,73;UBERON:0002780,2.39e-16,39;UBERON:0001890,2.39e-16,39;UBERON:0006240,2.39e-16,39;UBERON:0002619,3.39e-16,17;UBERON:0002950,8.70e-16,4;UBERON:0001891,8.70e-16,4;UBERON:0009616,8.70e-16,4;UBERON:0010286,8.70e-16,4;UBERON:0003056,1.79e-14,49;UBERON:0000956,7.51e-13,21;UBERON:0001869,7.51e-13,21;UBERON:0000203,7.51e-13,21;UBERON:0010314,9.11e-13,92;UBERON:0004684,1.26e-12,3;UBERON:0002275,1.26e-12,3;UBERON:0002038,1.50e-12,3;UBERON:0009663,1.50e-12,3;UBERON:0009661,1.50e-12,3;UBERON:0000125,1.50e-12,3;UBERON:0002308,1.50e-12,3;UBERON:0001948,3.03e-12,5;UBERON:0002315,3.03e-12,5;UBERON:0002240,3.17e-10,6;UBERON:0005174,3.17e-10,6;UBERON:0001137,3.17e-10,6;UBERON:0000025,1.32e-09,114;UBERON:0004111,9.80e-09,122;UBERON:0002420,4.93e-08,8;UBERON:0007245,4.93e-08,8;UBERON:0010009,4.93e-08,8;UBERON:0010011,4.93e-08,8;UBERON:0000454,4.93e-08,8;UBERON:0002256,7.44e-08,2;UBERON:0003076,1.64e-07,12;UBERON:0003057,1.64e-07,12 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.10434270475807,0,0,0,7.70811166995721,2.042997409363,3.07213066512487,0.263772575460388,0.548925861614458,0.52091337055676,1.67509799400829,7.31591393041184,5.04234217663473,4.71405736757868,3.98640706237488,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.25668024088073,0,0,0,0,1.49790639404823,1.83000241127451,0,0.869121600961382,1.53429274398198,0.62336413367868,1.94689515681309,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,1.3748254587495,0.685082519770642,2.2661816921691,1.35004500046361,2.70192721934532,1.35942722695261,3.62432218226274,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.824171801606613,0.294397840268795,0.685738504770831,0.532427418478012,0.476872379894642,0.145346416632329,0.376437521661322,0.25384382367503,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr2:158209586..158209595,+ | |||
}} |
Latest revision as of 10:21, 4 August 2015
Short description: | p@chr2:158209586..158209595, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:158209586..158209595, + |
Coexpression cluster: | MCL_coexpression_mm9:904 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.76e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.76e-15 | 23 |
raphe nuclei neuron | 1.26e-12 | 3 |
neuron of the substantia nigra | 1.50e-12 | 3 |
neuron | 3.90e-10 | 33 |
neuronal stem cell | 3.90e-10 | 33 |
neuroblast | 3.90e-10 | 33 |
electrically signaling cell | 3.90e-10 | 33 |
electrically responsive cell | 2.58e-08 | 39 |
electrically active cell | 2.58e-08 | 39 |
neuron of the dorsal spinal cord | 7.44e-08 | 2 |
neural cell | 2.21e-07 | 43 |
ectodermal cell | 3.55e-07 | 44 |
neurectodermal cell | 3.55e-07 | 44 |