FFCP PHASE1:Mm9::chr9:103014393..103014398,+: Difference between revisions
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{{FFCP|EntrezGene=270192|HGNC=|MCL_coexpression_id=168|UniProt=P61294,Q0PD53,Q0PD54|association_with_transcript=-5bp_to_ENSMUST00000035155,NM_173781,uc009rgf.1_5end|description=CAGE_peak_10_at_Rab6b_5end|id=chr9:103014393..103014398,+|ontology_enrichment_celltype=CL:0000117!2.14e-12!23;CL:0000337!2.14e-12!23;CL:0000540!1.72e-10!33;CL:0000047!1.72e-10!33;CL:0000031!1.72e-10!33;CL:0000404!1.72e-10!33;CL:0000393!6.50e-08!39;CL:0000211!6.50e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-13,23;CL:0000337,1.54e-13,23;CL:0002610,1.18e-10,3;CL:0000540,6.14e-09,33;CL:0000047,6.14e-09,33;CL:0000031,6.14e-09,33;CL:0000404,6.14e-09,33;CL:0002611,3.79e-08,2;CL:0000393,2.59e-07,39;CL:0000211,2.59e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.16e-17!71;UBERON:0003075!2.16e-17!71;UBERON:0007284!2.16e-17!71;UBERON:0001017!3.11e-17!73;UBERON:0005743!3.11e-17!73;UBERON:0001049!5.96e-17!52;UBERON:0005068!5.96e-17!52;UBERON:0006241!5.96e-17!52;UBERON:0007135!5.96e-17!52;UBERON:0000073!6.46e-17!75;UBERON:0001016!6.46e-17!75;UBERON:0000033!2.43e-16!63;UBERON:0004121!3.43e-16!102;UBERON:0000924!3.43e-16!102;UBERON:0006601!3.43e-16!102;UBERON:0000955!2.32e-15!50;UBERON:0006238!2.32e-15!50;UBERON:0002616!1.07e-14!49;UBERON:0002020!3.21e-14!34;UBERON:0007811!1.30e-13!86;UBERON:0003056!5.54e-13!49;UBERON:0003080!2.71e-11!40;UBERON:0000153!9.32e-11!94;UBERON:0002780!1.01e-10!39;UBERON:0001890!1.01e-10!39;UBERON:0006240!1.01e-10!39;UBERON:0002791!1.41e-10!29;UBERON:0003528!1.41e-10!29;UBERON:0001893!1.41e-10!29;UBERON:0000956!7.01e-07!21;UBERON:0001869!7.01e-07!21;UBERON:0000203!7.01e-07!21;UBERON:0003076!8.73e-07!12;UBERON:0003057!8.73e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.63e-26,54;UBERON:0001017,2.47e-22,73;UBERON:0001049,5.33e-22,52;UBERON:0005068,5.33e-22,52;UBERON:0006241,5.33e-22,52;UBERON:0007135,5.33e-22,52;UBERON:0001016,1.23e-21,75;UBERON:0003076,1.10e-18,12;UBERON:0003057,1.10e-18,12;UBERON:0002346,3.27e-17,64;UBERON:0003075,3.27e-17,64;UBERON:0007284,3.27e-17,64;UBERON:0004121,2.97e-16,95;UBERON:0000924,2.97e-16,95;UBERON:0006601,2.97e-16,95;UBERON:0002020,1.10e-15,34;UBERON:0002240,6.13e-15,6;UBERON:0005174,6.13e-15,6;UBERON:0001137,6.13e-15,6;UBERON:0010371,1.19e-14,73;UBERON:0002616,4.64e-13,46;UBERON:0000955,1.00e-12,47;UBERON:0006238,1.00e-12,47;UBERON:0001948,7.26e-12,5;UBERON:0002315,7.26e-12,5;UBERON:0010314,6.99e-11,92;UBERON:0004684,1.18e-10,3;UBERON:0002275,1.18e-10,3;UBERON:0002780,2.44e-09,39;UBERON:0001890,2.44e-09,39;UBERON:0006240,2.44e-09,39;UBERON:0003080,4.68e-09,40;UBERON:0002021,5.83e-09,10;UBERON:0000411,5.83e-09,10;UBERON:0001950,5.83e-09,10;UBERON:0003528,9.11e-09,29;UBERON:0002791,9.11e-09,29;UBERON:0001893,9.11e-09,29;UBERON:0001896,1.64e-08,2;UBERON:0002298,1.64e-08,2;UBERON:0005290,1.64e-08,2;UBERON:0010096,1.64e-08,2;UBERON:0002256,3.79e-08,2;UBERON:0000025,4.42e-08,114;UBERON:0004111,2.60e-07,122;UBERON:0003056,4.88e-07,49|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0.420649922702764,1.42825492201902,1.98781686856452,0.367472397644862,0.383381884072945,0.919218786610021,1.10115880999389,1.0214987046815,1.68967186581868,0.791317726381163,1.09785172322892,0.52091337055676,2.23346399201105,0,0.916789486660861,0.883885756421003,1.85083185038834,1.86399445825301,0,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,5.44561437714983,0,0,0,0,0.748953197024114,1.37250180845588,0.879580464790051,2.60736480288415,2.04572365864264,2.28566849015516,1.1356888414743,0,0.124406970610093,0,0.420883711772948,0.260240885925407,0,0.360124259610698,0,0.340182495756639,0.12811372028485,0.655912071918102,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0.841159794256509,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0.350679099451593,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.478364305972461,0,0,0,0,0,0,0,1.76605648986571,2.34423373184406,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0,0.963963949265421,0.141940085208269,0.178065603667255,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0,0,0,0,0,0,0,2.10837217149998,0,0,0.36012218806262,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0.63549621259146,0,0.16488625294148,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,1.66882771809459,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.216010681643603,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.299033092087958,0.330916980914195,0,0,0,0,0,0,0.483168241652012,0,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.457240839929999,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,0,0.443971906748129,0.0897138566094757,0.167884616364078,0.386379188064381,0.187682475451182,0,0,0.501572104035363,0.564751842617067,2.30162618253588,1.71868654031819,2.40594455281163,0,0,1.35004500046361,1.35096360967266,0.906284817968409,0,0.207574695168353,0,0.341467211508268,0.243106717068294,0,0,0,0.824140228955577,0,0,0,0.188626341386076,0.0936415074698824,0.384150914429216,0.17230640686684,0.952587382566147,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0.499621155875892,0,0.644613162144895,0.191288332068843,0.661774257358546,0.463735671240843|short_description=p10@Rab6b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:270192 | |||
|HGNC= | |||
|MCL_coexpression_id=168 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P61294,uniprot:Q0PD53,uniprot:Q0PD54 | |||
|association_with_transcript=-5bp_to_ENSMUST00000035155,NM_173781,uc009rgf.1_5end | |||
|cluster_id=chr9:103014393..103014398,+ | |||
|description=CAGE_peak_10_at_Rab6b_5end | |||
|id=chr9:103014393..103014398,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.14e-12!23;CL:0000337!2.14e-12!23;CL:0000540!1.72e-10!33;CL:0000047!1.72e-10!33;CL:0000031!1.72e-10!33;CL:0000404!1.72e-10!33;CL:0000393!6.50e-08!39;CL:0000211!6.50e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-13,23;CL:0000337,1.54e-13,23;CL:0002610,1.18e-10,3;CL:0000540,6.14e-09,33;CL:0000047,6.14e-09,33;CL:0000031,6.14e-09,33;CL:0000404,6.14e-09,33;CL:0002611,3.79e-08,2;CL:0000393,2.59e-07,39;CL:0000211,2.59e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.16e-17!71;UBERON:0003075!2.16e-17!71;UBERON:0007284!2.16e-17!71;UBERON:0001017!3.11e-17!73;UBERON:0005743!3.11e-17!73;UBERON:0001049!5.96e-17!52;UBERON:0005068!5.96e-17!52;UBERON:0006241!5.96e-17!52;UBERON:0007135!5.96e-17!52;UBERON:0000073!6.46e-17!75;UBERON:0001016!6.46e-17!75;UBERON:0000033!2.43e-16!63;UBERON:0004121!3.43e-16!102;UBERON:0000924!3.43e-16!102;UBERON:0006601!3.43e-16!102;UBERON:0000955!2.32e-15!50;UBERON:0006238!2.32e-15!50;UBERON:0002616!1.07e-14!49;UBERON:0002020!3.21e-14!34;UBERON:0007811!1.30e-13!86;UBERON:0003056!5.54e-13!49;UBERON:0003080!2.71e-11!40;UBERON:0000153!9.32e-11!94;UBERON:0002780!1.01e-10!39;UBERON:0001890!1.01e-10!39;UBERON:0006240!1.01e-10!39;UBERON:0002791!1.41e-10!29;UBERON:0003528!1.41e-10!29;UBERON:0001893!1.41e-10!29;UBERON:0000956!7.01e-07!21;UBERON:0001869!7.01e-07!21;UBERON:0000203!7.01e-07!21;UBERON:0003076!8.73e-07!12;UBERON:0003057!8.73e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.63e-26,54;UBERON:0001017,2.47e-22,73;UBERON:0001049,5.33e-22,52;UBERON:0005068,5.33e-22,52;UBERON:0006241,5.33e-22,52;UBERON:0007135,5.33e-22,52;UBERON:0001016,1.23e-21,75;UBERON:0003076,1.10e-18,12;UBERON:0003057,1.10e-18,12;UBERON:0002346,3.27e-17,64;UBERON:0003075,3.27e-17,64;UBERON:0007284,3.27e-17,64;UBERON:0004121,2.97e-16,95;UBERON:0000924,2.97e-16,95;UBERON:0006601,2.97e-16,95;UBERON:0002020,1.10e-15,34;UBERON:0002240,6.13e-15,6;UBERON:0005174,6.13e-15,6;UBERON:0001137,6.13e-15,6;UBERON:0010371,1.19e-14,73;UBERON:0002616,4.64e-13,46;UBERON:0000955,1.00e-12,47;UBERON:0006238,1.00e-12,47;UBERON:0001948,7.26e-12,5;UBERON:0002315,7.26e-12,5;UBERON:0010314,6.99e-11,92;UBERON:0004684,1.18e-10,3;UBERON:0002275,1.18e-10,3;UBERON:0002780,2.44e-09,39;UBERON:0001890,2.44e-09,39;UBERON:0006240,2.44e-09,39;UBERON:0003080,4.68e-09,40;UBERON:0002021,5.83e-09,10;UBERON:0000411,5.83e-09,10;UBERON:0001950,5.83e-09,10;UBERON:0003528,9.11e-09,29;UBERON:0002791,9.11e-09,29;UBERON:0001893,9.11e-09,29;UBERON:0001896,1.64e-08,2;UBERON:0002298,1.64e-08,2;UBERON:0005290,1.64e-08,2;UBERON:0010096,1.64e-08,2;UBERON:0002256,3.79e-08,2;UBERON:0000025,4.42e-08,114;UBERON:0004111,2.60e-07,122;UBERON:0003056,4.88e-07,49 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0.420649922702764,1.42825492201902,1.98781686856452,0.367472397644862,0.383381884072945,0.919218786610021,1.10115880999389,1.0214987046815,1.68967186581868,0.791317726381163,1.09785172322892,0.52091337055676,2.23346399201105,0,0.916789486660861,0.883885756421003,1.85083185038834,1.86399445825301,0,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,5.44561437714983,0,0,0,0,0.748953197024114,1.37250180845588,0.879580464790051,2.60736480288415,2.04572365864264,2.28566849015516,1.1356888414743,0,0.124406970610093,0,0.420883711772948,0.260240885925407,0,0.360124259610698,0,0.340182495756639,0.12811372028485,0.655912071918102,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0.841159794256509,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0.350679099451593,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.478364305972461,0,0,0,0,0,0,0,1.76605648986571,2.34423373184406,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0,0.963963949265421,0.141940085208269,0.178065603667255,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0,0,0,0,0,0,0,2.10837217149998,0,0,0.36012218806262,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0.63549621259146,0,0.16488625294148,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,1.66882771809459,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.216010681643603,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.299033092087958,0.330916980914195,0,0,0,0,0,0,0.483168241652012,0,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.457240839929999,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,0,0.443971906748129,0.0897138566094757,0.167884616364078,0.386379188064381,0.187682475451182,0,0,0.501572104035363,0.564751842617067,2.30162618253588,1.71868654031819,2.40594455281163,0,0,1.35004500046361,1.35096360967266,0.906284817968409,0,0.207574695168353,0,0.341467211508268,0.243106717068294,0,0,0,0.824140228955577,0,0,0,0.188626341386076,0.0936415074698824,0.384150914429216,0.17230640686684,0.952587382566147,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0.499621155875892,0,0.644613162144895,0.191288332068843,0.661774257358546,0.463735671240843 | |||
|short_description=p10@Rab6b | |||
}} |
Revision as of 10:46, 4 August 2015
Short description: | p10@Rab6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Rab6b_5end |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | -5bp_to_ENSMUST00000035155, NM_173781, uc009rgf.1_5end |
EntrezGene: | 270192 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.54e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.54e-13 | 23 |
raphe nuclei neuron | 1.18e-10 | 3 |
neuron | 6.14e-09 | 33 |
neuronal stem cell | 6.14e-09 | 33 |
neuroblast | 6.14e-09 | 33 |
electrically signaling cell | 6.14e-09 | 33 |
neuron of the dorsal spinal cord | 3.79e-08 | 2 |
electrically responsive cell | 2.59e-07 | 39 |
electrically active cell | 2.59e-07 | 39 |