FFCP PHASE1:Mm9::chr17:34766355..34766394,+: Difference between revisions
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{{FFCP|EntrezGene=260297|HGNC=|MCL_coexpression_id=2|UniProt=O35449|association_with_transcript=-83bp_to_ENSMUST00000015620_5end|description=CAGE_peak_4_at_Prrt1_5end|id=chr17:34766355..34766394,+|ontology_enrichment_celltype=CL:0000117!4.88e-12!23;CL:0000337!4.88e-12!23;CL:0000540!2.82e-08!33;CL:0000047!2.82e-08!33;CL:0000031!2.82e-08!33;CL:0000404!2.82e-08!33;CL:0002319!3.26e-08!43;CL:0000221!9.28e-08!44;CL:0000133!9.28e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-17,23;CL:0000337,1.19e-17,23;CL:0000540,2.06e-10,33;CL:0000047,2.06e-10,33;CL:0000031,2.06e-10,33;CL:0000404,2.06e-10,33;CL:0002319,2.95e-08,43;CL:0000221,6.24e-08,44;CL:0000133,6.24e-08,44;CL:0000393,6.33e-08,39;CL:0000211,6.33e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.56e-29!52;UBERON:0005068!1.56e-29!52;UBERON:0006241!1.56e-29!52;UBERON:0007135!1.56e-29!52;UBERON:0001017!1.72e-28!73;UBERON:0005743!1.72e-28!73;UBERON:0000955!1.93e-28!50;UBERON:0006238!1.93e-28!50;UBERON:0002616!1.38e-27!49;UBERON:0000073!1.45e-27!75;UBERON:0001016!1.45e-27!75;UBERON:0000033!2.05e-27!63;UBERON:0007811!4.64e-27!86;UBERON:0002346!2.04e-26!71;UBERON:0003075!2.04e-26!71;UBERON:0007284!2.04e-26!71;UBERON:0000153!1.93e-25!94;UBERON:0003056!3.37e-24!49;UBERON:0003080!6.05e-23!40;UBERON:0002780!3.03e-22!39;UBERON:0001890!3.03e-22!39;UBERON:0006240!3.03e-22!39;UBERON:0004121!3.43e-22!102;UBERON:0000924!3.43e-22!102;UBERON:0006601!3.43e-22!102;UBERON:0002020!5.20e-21!34;UBERON:0002791!3.82e-18!29;UBERON:0003528!3.82e-18!29;UBERON:0001893!3.82e-18!29;UBERON:0000956!8.23e-13!21;UBERON:0001869!8.23e-13!21;UBERON:0000203!8.23e-13!21;UBERON:0002619!8.01e-11!17;UBERON:0002021!3.13e-09!10;UBERON:0000411!3.13e-09!10;UBERON:0001950!3.13e-09!10;UBERON:0003076!5.14e-07!12;UBERON:0003057!5.14e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.13e-37,54;UBERON:0001049,6.55e-35,52;UBERON:0005068,6.55e-35,52;UBERON:0006241,6.55e-35,52;UBERON:0007135,6.55e-35,52;UBERON:0001017,9.86e-33,73;UBERON:0001016,1.95e-31,75;UBERON:0002020,1.22e-30,34;UBERON:0000955,2.67e-30,47;UBERON:0006238,2.67e-30,47;UBERON:0002616,4.86e-29,46;UBERON:0003080,7.86e-27,40;UBERON:0003528,5.95e-26,29;UBERON:0002791,5.95e-26,29;UBERON:0001893,5.95e-26,29;UBERON:0002346,9.09e-26,64;UBERON:0003075,9.09e-26,64;UBERON:0007284,9.09e-26,64;UBERON:0002780,9.36e-26,39;UBERON:0001890,9.36e-26,39;UBERON:0006240,9.36e-26,39;UBERON:0004121,1.57e-21,95;UBERON:0000924,1.57e-21,95;UBERON:0006601,1.57e-21,95;UBERON:0010371,6.37e-21,73;UBERON:0003056,6.54e-20,49;UBERON:0000956,2.49e-17,21;UBERON:0001869,2.49e-17,21;UBERON:0000203,2.49e-17,21;UBERON:0002021,3.89e-14,10;UBERON:0000411,3.89e-14,10;UBERON:0001950,3.89e-14,10;UBERON:0002619,4.44e-14,17;UBERON:0010314,6.61e-14,92;UBERON:0002420,8.75e-10,8;UBERON:0007245,8.75e-10,8;UBERON:0010009,8.75e-10,8;UBERON:0010011,8.75e-10,8;UBERON:0000454,8.75e-10,8;UBERON:0000025,7.21e-09,114;UBERON:0003076,2.94e-08,12;UBERON:0003057,2.94e-08,12;UBERON:0011216,9.04e-08,194;UBERON:0004111,1.55e-07,122;UBERON:0000369,5.71e-07,5;UBERON:0002435,5.71e-07,5;UBERON:0000204,5.71e-07,5;UBERON:0010082,5.71e-07,5|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,1.5378032791413,0.777719596297134,0,0,0,0,0,0,0,0,3.64169629547276,2.11596391708813,3.1691570175309,0,0,0,0,0,0.599200221036809,1.53687322128622,1.45165457231869,2.02508907497536,1.26194976810829,3.42781181284564,1.76694832761291,0.979926393719632,2.30029130443767,0,1.10115880999389,6.12899222808901,3.68655679814984,4.08847491963601,5.03182039813253,4.16730696445408,1.67509799400829,4.50210088025344,8.86229837105499,2.65165726926301,2.56269025438385,1.86399445825301,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.520455980298408,0,0,0,0.470354828542819,0,0,0,0,0,0,0,0,7.02673912827713,12.1479089951804,0,0,0,0,4.04434726393021,10.980014467647,9.1727677042391,20.8589184230732,21.9915293304084,7.06479351502504,11.5191296778108,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.60281927134286,0.95251098811859,0.640568601424249,0.562210347358373,0.776110112217047,0,0.189106080167819,0,0.43839146485515,0,0.696504333044333,1.02891068203972,0.199034266818493,0,0,0,0,0,0,0.710234206755631,0.196764231747404,0,0,0,0.116765342367169,0,0,0.243206428637567,0,0,0,36.1698711530299,14.3037411207205,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,1.60550589987792,2.22702204525186,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0.876767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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:260297 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35449 | |||
|association_with_transcript=-83bp_to_ENSMUST00000015620_5end | |||
|cluster_id=chr17:34766355..34766394,+ | |||
|description=CAGE_peak_4_at_Prrt1_5end | |||
|id=chr17:34766355..34766394,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.88e-12!23;CL:0000337!4.88e-12!23;CL:0000540!2.82e-08!33;CL:0000047!2.82e-08!33;CL:0000031!2.82e-08!33;CL:0000404!2.82e-08!33;CL:0002319!3.26e-08!43;CL:0000221!9.28e-08!44;CL:0000133!9.28e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-17,23;CL:0000337,1.19e-17,23;CL:0000540,2.06e-10,33;CL:0000047,2.06e-10,33;CL:0000031,2.06e-10,33;CL:0000404,2.06e-10,33;CL:0002319,2.95e-08,43;CL:0000221,6.24e-08,44;CL:0000133,6.24e-08,44;CL:0000393,6.33e-08,39;CL:0000211,6.33e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.56e-29!52;UBERON:0005068!1.56e-29!52;UBERON:0006241!1.56e-29!52;UBERON:0007135!1.56e-29!52;UBERON:0001017!1.72e-28!73;UBERON:0005743!1.72e-28!73;UBERON:0000955!1.93e-28!50;UBERON:0006238!1.93e-28!50;UBERON:0002616!1.38e-27!49;UBERON:0000073!1.45e-27!75;UBERON:0001016!1.45e-27!75;UBERON:0000033!2.05e-27!63;UBERON:0007811!4.64e-27!86;UBERON:0002346!2.04e-26!71;UBERON:0003075!2.04e-26!71;UBERON:0007284!2.04e-26!71;UBERON:0000153!1.93e-25!94;UBERON:0003056!3.37e-24!49;UBERON:0003080!6.05e-23!40;UBERON:0002780!3.03e-22!39;UBERON:0001890!3.03e-22!39;UBERON:0006240!3.03e-22!39;UBERON:0004121!3.43e-22!102;UBERON:0000924!3.43e-22!102;UBERON:0006601!3.43e-22!102;UBERON:0002020!5.20e-21!34;UBERON:0002791!3.82e-18!29;UBERON:0003528!3.82e-18!29;UBERON:0001893!3.82e-18!29;UBERON:0000956!8.23e-13!21;UBERON:0001869!8.23e-13!21;UBERON:0000203!8.23e-13!21;UBERON:0002619!8.01e-11!17;UBERON:0002021!3.13e-09!10;UBERON:0000411!3.13e-09!10;UBERON:0001950!3.13e-09!10;UBERON:0003076!5.14e-07!12;UBERON:0003057!5.14e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.13e-37,54;UBERON:0001049,6.55e-35,52;UBERON:0005068,6.55e-35,52;UBERON:0006241,6.55e-35,52;UBERON:0007135,6.55e-35,52;UBERON:0001017,9.86e-33,73;UBERON:0001016,1.95e-31,75;UBERON:0002020,1.22e-30,34;UBERON:0000955,2.67e-30,47;UBERON:0006238,2.67e-30,47;UBERON:0002616,4.86e-29,46;UBERON:0003080,7.86e-27,40;UBERON:0003528,5.95e-26,29;UBERON:0002791,5.95e-26,29;UBERON:0001893,5.95e-26,29;UBERON:0002346,9.09e-26,64;UBERON:0003075,9.09e-26,64;UBERON:0007284,9.09e-26,64;UBERON:0002780,9.36e-26,39;UBERON:0001890,9.36e-26,39;UBERON:0006240,9.36e-26,39;UBERON:0004121,1.57e-21,95;UBERON:0000924,1.57e-21,95;UBERON:0006601,1.57e-21,95;UBERON:0010371,6.37e-21,73;UBERON:0003056,6.54e-20,49;UBERON:0000956,2.49e-17,21;UBERON:0001869,2.49e-17,21;UBERON:0000203,2.49e-17,21;UBERON:0002021,3.89e-14,10;UBERON:0000411,3.89e-14,10;UBERON:0001950,3.89e-14,10;UBERON:0002619,4.44e-14,17;UBERON:0010314,6.61e-14,92;UBERON:0002420,8.75e-10,8;UBERON:0007245,8.75e-10,8;UBERON:0010009,8.75e-10,8;UBERON:0010011,8.75e-10,8;UBERON:0000454,8.75e-10,8;UBERON:0000025,7.21e-09,114;UBERON:0003076,2.94e-08,12;UBERON:0003057,2.94e-08,12;UBERON:0011216,9.04e-08,194;UBERON:0004111,1.55e-07,122;UBERON:0000369,5.71e-07,5;UBERON:0002435,5.71e-07,5;UBERON:0000204,5.71e-07,5;UBERON:0010082,5.71e-07,5 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,1.5378032791413,0.777719596297134,0,0,0,0,0,0,0,0,3.64169629547276,2.11596391708813,3.1691570175309,0,0,0,0,0,0.599200221036809,1.53687322128622,1.45165457231869,2.02508907497536,1.26194976810829,3.42781181284564,1.76694832761291,0.979926393719632,2.30029130443767,0,1.10115880999389,6.12899222808901,3.68655679814984,4.08847491963601,5.03182039813253,4.16730696445408,1.67509799400829,4.50210088025344,8.86229837105499,2.65165726926301,2.56269025438385,1.86399445825301,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.520455980298408,0,0,0,0.470354828542819,0,0,0,0,0,0,0,0,7.02673912827713,12.1479089951804,0,0,0,0,4.04434726393021,10.980014467647,9.1727677042391,20.8589184230732,21.9915293304084,7.06479351502504,11.5191296778108,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.60281927134286,0.95251098811859,0.640568601424249,0.562210347358373,0.776110112217047,0,0.189106080167819,0,0.43839146485515,0,0.696504333044333,1.02891068203972,0.199034266818493,0,0,0,0,0,0,0.710234206755631,0.196764231747404,0,0,0,0.116765342367169,0,0,0.243206428637567,0,0,0,36.1698711530299,14.3037411207205,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,1.60550589987792,2.22702204525186,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0.876767573733936,0,15.4234231882467,0.141940085208269,0.35613120733451,0.325773918707152,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0.900305470156551,0.517434735131018,0.857348140126369,2.30542303734956,0.356737635204141,0.822745103010605,2.13125464380219,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0.632022241256357,0.202725215290164,0.513554785824136,0.389762468933385,0.537080087002444,1.78813219303138,1.56254084375959,2.65841148914239,1.81739609906666,2.13379058634,2.41982844328417,2.14407337627455,3.2712026157712,3.50630706544707,0,0,0,0,0,0,0.36630324853453,0,0,24.2843292325339,17.4923589872727,23.4887160510153,28.5276282690521,13.0165678756422,19.6402413321322,20.925697507186,15.3109209096235,8.60970577069989,19.1571315348173,0.31136204275253,0.399024873401031,1.70733605754134,1.21553358534147,0.628839487883947,1.10306105070008,1.77797382241292,0.412070114477788,0.962757628775446,1.51618327058278,0.50695859978048,1.50901073108861,1.12369808963859,1.08842759088278,1.60819313075717,1.42888107384922,1.15884325944855,1.73618298417335,0,1.17759136107518,1.02860775715625,0.354951612318675,1.1921809497366,0.290692833264657,0.846984423737976,0.846146078916765,0.182927972872773,0.526139422875686,1.7654534799962,0.561142271657738,0.474540072496697,1.67457620038458,0.818462086339379,1.54936841185966,0.578719832943424,1.99848462350357,0.467863216890817,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p4@Prrt1 | |||
}} |
Revision as of 17:45, 4 August 2015
Short description: | p4@Prrt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Prrt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -83bp_to_ENSMUST00000015620_5end |
EntrezGene: | 260297 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.19e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-17 | 23 |
neuron | 2.06e-10 | 33 |
neuronal stem cell | 2.06e-10 | 33 |
neuroblast | 2.06e-10 | 33 |
electrically signaling cell | 2.06e-10 | 33 |
neural cell | 2.95e-08 | 43 |
ectodermal cell | 6.24e-08 | 44 |
neurectodermal cell | 6.24e-08 | 44 |
electrically responsive cell | 6.33e-08 | 39 |
electrically active cell | 6.33e-08 | 39 |