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FFCP PHASE1:Mm9::chr4:126429321..126429353,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=935
|MCL_coexpression_id=935
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:126429321..126429353,-
|description=CAGE_peak_at_chr4:126429321..126429353,-
|description=CAGE_peak_at_chr4:126429321..126429353,-
|id=chr4:126429321..126429353,-
|id=chr4:126429321..126429353,-
|ontology_enrichment_celltype=CL:0000117!1.64e-08!23;CL:0000337!1.64e-08!23
|ontology_enrichment_celltype=CL:0000117!1.64e-08!23;CL:0000337!1.64e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,9.59e-11,23;CL:0000337,9.59e-11,23;CL:0002319,6.03e-08,43;CL:0000221,1.12e-07,44;CL:0000133,1.12e-07,44;CL:0002610,2.55e-07,3;CL:0002614,8.91e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!7.30e-21!52;UBERON:0005068!7.30e-21!52;UBERON:0006241!7.30e-21!52;UBERON:0007135!7.30e-21!52;UBERON:0000955!4.16e-20!50;UBERON:0006238!4.16e-20!50;UBERON:0000073!7.10e-20!75;UBERON:0001016!7.10e-20!75;UBERON:0002616!2.41e-19!49;UBERON:0001017!9.76e-19!73;UBERON:0005743!9.76e-19!73;UBERON:0000033!4.15e-18!63;UBERON:0004121!2.38e-16!102;UBERON:0000924!2.38e-16!102;UBERON:0006601!2.38e-16!102;UBERON:0002346!2.68e-16!71;UBERON:0003075!2.68e-16!71;UBERON:0007284!2.68e-16!71;UBERON:0002020!4.93e-16!34;UBERON:0003080!1.13e-14!40;UBERON:0003056!4.73e-14!49;UBERON:0002780!6.58e-14!39;UBERON:0001890!6.58e-14!39;UBERON:0006240!6.58e-14!39;UBERON:0002791!5.00e-13!29;UBERON:0003528!5.00e-13!29;UBERON:0001893!5.00e-13!29;UBERON:0007811!5.25e-10!86;UBERON:0000956!5.32e-09!21;UBERON:0001869!5.32e-09!21;UBERON:0000203!5.32e-09!21;UBERON:0000153!5.67e-09!94;UBERON:0002619!1.58e-08!17;UBERON:0002021!4.21e-08!10;UBERON:0000411!4.21e-08!10;UBERON:0001950!4.21e-08!10;UBERON:0003076!5.23e-07!12;UBERON:0003057!5.23e-07!12
|ontology_enrichment_uberon=UBERON:0001049!7.30e-21!52;UBERON:0005068!7.30e-21!52;UBERON:0006241!7.30e-21!52;UBERON:0007135!7.30e-21!52;UBERON:0000955!4.16e-20!50;UBERON:0006238!4.16e-20!50;UBERON:0000073!7.10e-20!75;UBERON:0001016!7.10e-20!75;UBERON:0002616!2.41e-19!49;UBERON:0001017!9.76e-19!73;UBERON:0005743!9.76e-19!73;UBERON:0000033!4.15e-18!63;UBERON:0004121!2.38e-16!102;UBERON:0000924!2.38e-16!102;UBERON:0006601!2.38e-16!102;UBERON:0002346!2.68e-16!71;UBERON:0003075!2.68e-16!71;UBERON:0007284!2.68e-16!71;UBERON:0002020!4.93e-16!34;UBERON:0003080!1.13e-14!40;UBERON:0003056!4.73e-14!49;UBERON:0002780!6.58e-14!39;UBERON:0001890!6.58e-14!39;UBERON:0006240!6.58e-14!39;UBERON:0002791!5.00e-13!29;UBERON:0003528!5.00e-13!29;UBERON:0001893!5.00e-13!29;UBERON:0007811!5.25e-10!86;UBERON:0000956!5.32e-09!21;UBERON:0001869!5.32e-09!21;UBERON:0000203!5.32e-09!21;UBERON:0000153!5.67e-09!94;UBERON:0002619!1.58e-08!17;UBERON:0002021!4.21e-08!10;UBERON:0000411!4.21e-08!10;UBERON:0001950!4.21e-08!10;UBERON:0003076!5.23e-07!12;UBERON:0003057!5.23e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.91e-32,75;UBERON:0000073,1.22e-31,54;UBERON:0001017,1.74e-29,73;UBERON:0001049,2.92e-28,52;UBERON:0005068,2.92e-28,52;UBERON:0006241,2.92e-28,52;UBERON:0007135,2.92e-28,52;UBERON:0004121,2.47e-27,95;UBERON:0000924,2.47e-27,95;UBERON:0006601,2.47e-27,95;UBERON:0002346,1.51e-24,64;UBERON:0003075,1.51e-24,64;UBERON:0007284,1.51e-24,64;UBERON:0000955,6.70e-22,47;UBERON:0006238,6.70e-22,47;UBERON:0010371,7.39e-22,73;UBERON:0002020,1.65e-21,34;UBERON:0002616,1.79e-20,46;UBERON:0002021,3.06e-17,10;UBERON:0000411,3.06e-17,10;UBERON:0001950,3.06e-17,10;UBERON:0003080,1.97e-16,40;UBERON:0003528,2.65e-15,29;UBERON:0002791,2.65e-15,29;UBERON:0001893,2.65e-15,29;UBERON:0002780,5.04e-15,39;UBERON:0001890,5.04e-15,39;UBERON:0006240,5.04e-15,39;UBERON:0003056,5.06e-15,49;UBERON:0010314,1.84e-14,92;UBERON:0002619,1.36e-13,17;UBERON:0003076,1.77e-13,12;UBERON:0003057,1.77e-13,12;UBERON:0000956,1.63e-12,21;UBERON:0001869,1.63e-12,21;UBERON:0000203,1.63e-12,21;UBERON:0002240,3.62e-10,6;UBERON:0005174,3.62e-10,6;UBERON:0001137,3.62e-10,6;UBERON:0000025,3.04e-09,114;UBERON:0004111,6.16e-09,122;UBERON:0002950,9.95e-09,4;UBERON:0001891,9.95e-09,4;UBERON:0009616,9.95e-09,4;UBERON:0010286,9.95e-09,4;UBERON:0001948,2.33e-08,5;UBERON:0002315,2.33e-08,5;UBERON:0004684,2.55e-07,3;UBERON:0002275,2.55e-07,3;UBERON:0011216,7.05e-07,194;UBERON:0002038,8.91e-07,3;UBERON:0009663,8.91e-07,3;UBERON:0009661,8.91e-07,3;UBERON:0000125,8.91e-07,3;UBERON:0002308,8.91e-07,3
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0.234064526321993,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0.137114433605739,0,17.5189177711204,0,0,0,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.436050312760893,2.41654801007919,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,2.09720077362883,0.768436610643109,0.311068836925433,0.945041568321835,0,21.7094748146891,22.9703282589678,0.489963196859816,0.0958454710182364,0,167.376139119071,135.85932772264,134.098503532701,0.263772575460388,0.457438218012048,0.52091337055676,90.7344746754488,42.207195752376,40.0331409175242,8.2496003932627,9.25415925194169,1.3047961207771,1.51452386666368,2.26714680320357,0,0,0.679971333707751,1.07940638327563,0,0,3.5111105032938,0.340860645156116,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0,0,0,2.51204535381932,0,0,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0.884610551949874,0,0,0,0,11.1256702864388,12.9856958224342,0,0.239630249011841,0,0,174.356304267214,66.3375874087008,0.628271760564322,49.8875798951833,34.010155824934,135.477805052833,87.7725233196569,0.101839363850316,0.124406970610093,0.252722758433675,1.05220927943237,0,0,0,0.30140963567143,0.0680364991513279,0.384341160854549,0.187403449119458,3.3631438196072,0,0,0.175951124163949,0,0,1.39300866608867,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,297.349987269676,0.411618449517138,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0.318909537314974,0,0.172684981865896,0.578596234326046,0,0.54390568381871,0,0,119.449638950917,95.76194794583,0.163934945376675,0,0,0,0,0,0.222798674082394,0,0,0,0,83.5435422696698,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0.258717367565509,0,0,0.356737635204141,0.658196082408484,2.43571959291679,0,0,0.661585194164886,0,1.29171541356724,0.180938774784468,0.119372344003136,0,0.291480836629851,117.374216172653,0.170870880797853,0,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,0,0,0.418176592028937,0,0.404593039154462,0.0826534557253359,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,30.5958983461572,35.5793660848752,34.5243927380383,31.5092532391668,37.4639937509239,28.773465830367,30.215755895588,29.0259675099676,30.1715206160228,29.0011141749891,27.4412965228465,0,0.399024873401031,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0,0.252697211763798,0.50695859978048,0.754505365544305,0.187283014939765,0.320125762024346,0.34461281373368,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.676916863133412,0.182927972872773,0.789209134313529,0,0.561142271657738,0.355905054372522,0.0985044823755635,0.409231043169689,0.464810523557898,0.192906610981141,0.749431733813838,0.233931608445408,0.859484216193193,0.765153328275374,0.661774257358546,2.08681052058379
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0.234064526321993,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0.137114433605739,0,17.5189177711204,0,0,0,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.436050312760893,2.41654801007919,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,2.09720077362883,0.768436610643109,0.311068836925433,0.945041568321835,0,21.7094748146891,22.9703282589678,0.489963196859816,0.0958454710182364,0,167.376139119071,135.85932772264,134.098503532701,0.263772575460388,0.457438218012048,0.52091337055676,90.7344746754488,42.207195752376,40.0331409175242,8.2496003932627,9.25415925194169,1.3047961207771,1.51452386666368,2.26714680320357,0,0,0.679971333707751,1.07940638327563,0,0,3.5111105032938,0.340860645156116,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0,0,0,2.51204535381932,0,0,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0.884610551949874,0,0,0,0,11.1256702864388,12.9856958224342,0,0.239630249011841,0,0,174.356304267214,66.3375874087008,0.628271760564322,49.8875798951833,34.010155824934,135.477805052833,87.7725233196569,0.101839363850316,0.124406970610093,0.252722758433675,1.05220927943237,0,0,0,0.30140963567143,0.0680364991513279,0.384341160854549,0.187403449119458,3.3631438196072,0,0,0.175951124163949,0,0,1.39300866608867,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,297.349987269676,0.411618449517138,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0.318909537314974,0,0.172684981865896,0.578596234326046,0,0.54390568381871,0,0,119.449638950917,95.76194794583,0.163934945376675,0,0,0,0,0,0.222798674082394,0,0,0,0,83.5435422696698,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0.258717367565509,0,0,0.356737635204141,0.658196082408484,2.43571959291679,0,0,0.661585194164886,0,1.29171541356724,0.180938774784468,0.119372344003136,0,0.291480836629851,117.374216172653,0.170870880797853,0,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,0,0,0.418176592028937,0,0.404593039154462,0.0826534557253359,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,30.5958983461572,35.5793660848752,34.5243927380383,31.5092532391668,37.4639937509239,28.773465830367,30.215755895588,29.0259675099676,30.1715206160228,29.0011141749891,27.4412965228465,0,0.399024873401031,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0,0.252697211763798,0.50695859978048,0.754505365544305,0.187283014939765,0.320125762024346,0.34461281373368,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.676916863133412,0.182927972872773,0.789209134313529,0,0.561142271657738,0.355905054372522,0.0985044823755635,0.409231043169689,0.464810523557898,0.192906610981141,0.749431733813838,0.233931608445408,0.859484216193193,0.765153328275374,0.661774257358546,2.08681052058379
|short_description=p@chr4:126429321..126429353,-
|short_description=p@chr4:126429321..126429353,-
}}
}}

Latest revision as of 18:26, 4 August 2015

Short description:p@chr4:126429321..126429353, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:126429321..126429353, -
Coexpression cluster:MCL_coexpression_mm9:935
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr4:126429321..126429353-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.97
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3167.38
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3135.86
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7134.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E490.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E542.21
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F92.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.13
cerebellum, neonate N30.CNhs11135.1395-42I212.99
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4174.36
corpus striatum, adult.CNhs10487.19-21D866.34
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D549.89
cortex, neonate N30.CNhs11107.1392-42F234.01
diencephalon, adult.CNhs10482.20-12F2135.48
diencephalon, neonate N30.CNhs11201.1388-42B287.77
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8297.35
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2119.45
medulla oblongata, neonate N30.CNhs11200.1396-42A395.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I983.54
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C9117.37
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F830.60
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A331.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.46
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.22
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.44
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.59e-1123
neuroblast (sensu Vertebrata)9.59e-1123
neural cell6.03e-0843
ectodermal cell1.12e-0744
neurectodermal cell1.12e-0744
raphe nuclei neuron2.55e-073
neuron of the substantia nigra8.91e-073

Uber anatomy
Ontology termp-valuen
nervous system6.91e-3275
regional part of nervous system1.22e-3154
central nervous system1.74e-2973
neural tube2.92e-2852
neural rod2.92e-2852
future spinal cord2.92e-2852
neural keel2.92e-2852
ectoderm-derived structure2.47e-2795
ectoderm2.47e-2795
presumptive ectoderm2.47e-2795
neurectoderm1.51e-2464
neural plate1.51e-2464
presumptive neural plate1.51e-2464
brain6.70e-2247
future brain6.70e-2247
ecto-epithelium7.39e-2273
gray matter1.65e-2134
regional part of brain1.79e-2046
occipital lobe3.06e-1710
visual cortex3.06e-1710
neocortex3.06e-1710
anterior neural tube1.97e-1640
brain grey matter2.65e-1529
regional part of telencephalon2.65e-1529
telencephalon2.65e-1529
regional part of forebrain5.04e-1539
forebrain5.04e-1539
future forebrain5.04e-1539
pre-chordal neural plate5.06e-1549
structure with developmental contribution from neural crest1.84e-1492
regional part of cerebral cortex1.36e-1317
posterior neural tube1.77e-1312
chordal neural plate1.77e-1312
cerebral cortex1.63e-1221
cerebral hemisphere1.63e-1221
pallium1.63e-1221
spinal cord3.62e-106
dorsal region element3.62e-106
dorsum3.62e-106
tube3.04e-09114
anatomical conduit6.16e-09122
regional part of midbrain9.95e-094
midbrain9.95e-094
presumptive midbrain9.95e-094
midbrain neural tube9.95e-094
regional part of spinal cord2.33e-085
gray matter of spinal cord2.33e-085
raphe nuclei2.55e-073
reticular formation2.55e-073
organ system subdivision7.05e-07194
substantia nigra8.91e-073
telencephalic nucleus8.91e-073
midbrain nucleus8.91e-073
neural nucleus8.91e-073
nucleus of brain8.91e-073
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