FFCP PHASE1:Mm9::chr10:84218800..84218829,+: Difference between revisions
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{{FFCP|EntrezGene=71137|HGNC=|MCL_coexpression_id=2593|UniProt=Q7TNK1|association_with_transcript=0bp_to_ENSMUST00000060397_5end|description=CAGE_peak_2_at_Rfx4_5end|id=chr10:84218800..84218829,+|ontology_enrichment_celltype=CL:0000117!6.98e-17!23;CL:0000337!6.98e-17!23;CL:0002319!5.61e-16!43;CL:0000221!2.54e-15!44;CL:0000133!2.54e-15!44;CL:0000055!5.52e-12!50;CL:0000540!1.27e-10!33;CL:0000047!1.27e-10!33;CL:0000031!1.27e-10!33;CL:0000404!1.27e-10!33;CL:0002453!7.61e-08!8;CL:0000393!1.08e-07!39;CL:0000211!1.08e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-21,23;CL:0000337,1.54e-21,23;CL:0002319,7.21e-18,43;CL:0000221,3.08e-17,44;CL:0000133,3.08e-17,44;CL:0000540,8.97e-13,33;CL:0000047,8.97e-13,33;CL:0000031,8.97e-13,33;CL:0000404,8.97e-13,33;CL:0000393,9.47e-10,39;CL:0000211,9.47e-10,39;CL:0002453,3.66e-08,8;CL:0002321,1.81e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.20e-42!73;UBERON:0005743!1.20e-42!73;UBERON:0000073!6.85e-42!75;UBERON:0001016!6.85e-42!75;UBERON:0001049!7.29e-40!52;UBERON:0005068!7.29e-40!52;UBERON:0006241!7.29e-40!52;UBERON:0007135!7.29e-40!52;UBERON:0000955!1.01e-38!50;UBERON:0006238!1.01e-38!50;UBERON:0002616!6.73e-38!49;UBERON:0000033!6.08e-34!63;UBERON:0002346!3.17e-30!71;UBERON:0003075!3.17e-30!71;UBERON:0007284!3.17e-30!71;UBERON:0003080!5.07e-30!40;UBERON:0004121!7.18e-30!102;UBERON:0000924!7.18e-30!102;UBERON:0006601!7.18e-30!102;UBERON:0003056!4.75e-29!49;UBERON:0002780!5.67e-29!39;UBERON:0001890!5.67e-29!39;UBERON:0006240!5.67e-29!39;UBERON:0002020!1.93e-24!34;UBERON:0002791!6.82e-21!29;UBERON:0003528!6.82e-21!29;UBERON:0001893!6.82e-21!29;UBERON:0000153!3.70e-19!94;UBERON:0007811!4.88e-19!86;UBERON:0000956!3.95e-15!21;UBERON:0001869!3.95e-15!21;UBERON:0000203!3.95e-15!21;UBERON:0002619!7.57e-13!17;UBERON:0003076!9.12e-10!12;UBERON:0003057!9.12e-10!12;UBERON:0001894!8.48e-09!10;UBERON:0006222!8.48e-09!10;UBERON:0002021!3.73e-08!10;UBERON:0000411!3.73e-08!10;UBERON:0001950!3.73e-08!10;UBERON:0000025!4.35e-08!114;UBERON:0000007!4.30e-07!8;UBERON:0003296!4.30e-07!8;UBERON:0010133!4.30e-07!8;UBERON:0002420!6.34e-07!8;UBERON:0007245!6.34e-07!8;UBERON:0010009!6.34e-07!8;UBERON:0010011!6.34e-07!8;UBERON:0000454!6.34e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.63e-53,73;UBERON:0000073,1.61e-52,54;UBERON:0001016,7.26e-51,75;UBERON:0001049,6.92e-50,52;UBERON:0005068,6.92e-50,52;UBERON:0006241,6.92e-50,52;UBERON:0007135,6.92e-50,52;UBERON:0000955,1.27e-44,47;UBERON:0006238,1.27e-44,47;UBERON:0002616,1.42e-43,46;UBERON:0002346,2.65e-40,64;UBERON:0003075,2.65e-40,64;UBERON:0007284,2.65e-40,64;UBERON:0003080,1.04e-38,40;UBERON:0004121,1.47e-38,95;UBERON:0000924,1.47e-38,95;UBERON:0006601,1.47e-38,95;UBERON:0002780,2.43e-37,39;UBERON:0001890,2.43e-37,39;UBERON:0006240,2.43e-37,39;UBERON:0010371,3.06e-33,73;UBERON:0003056,5.44e-32,49;UBERON:0002020,2.05e-31,34;UBERON:0003528,8.89e-27,29;UBERON:0002791,8.89e-27,29;UBERON:0001893,8.89e-27,29;UBERON:0010314,6.17e-23,92;UBERON:0000956,2.99e-19,21;UBERON:0001869,2.99e-19,21;UBERON:0000203,2.99e-19,21;UBERON:0002619,2.84e-16,17;UBERON:0000025,5.38e-14,114;UBERON:0004111,4.25e-12,122;UBERON:0001894,5.38e-11,10;UBERON:0006222,5.38e-11,10;UBERON:0003076,9.53e-11,12;UBERON:0003057,9.53e-11,12;UBERON:0002021,3.69e-10,10;UBERON:0000411,3.69e-10,10;UBERON:0001950,3.69e-10,10;UBERON:0000007,8.87e-09,8;UBERON:0003296,8.87e-09,8;UBERON:0010133,8.87e-09,8;UBERON:0002420,1.47e-08,8;UBERON:0007245,1.47e-08,8;UBERON:0010009,1.47e-08,8;UBERON:0010011,1.47e-08,8;UBERON:0000454,1.47e-08,8;UBERON:0011216,2.59e-08,194;UBERON:0001954,1.55e-07,7;UBERON:0003022,1.55e-07,7;UBERON:0002421,1.55e-07,7;UBERON:0000349,1.55e-07,7;UBERON:0002600,1.55e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,20.2763395433815,6.81027166476863,15.748821825017,14.1386285841616,20.125359011096,0,0,0,0,0,0,9.91350658212029,7.40587370980846,7.60597684207415,0.677689064138264,0.889294796111139,0,0,0,8.98800331555214,21.9004434033286,4.14758449233911,4.45519596494579,3.36519938162211,5.14171771926846,5.74258206474195,5.14461356702807,4.79227355091182,7.35375029288017,11.0115880999389,8.81042632787795,11.2132769277058,7.91317726381163,7.22752384459036,8.85552729946492,8.93385596804419,9.56696437053856,9.47349136216223,10.0173719061047,10.2507610175354,5.03278503728312,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2473278954042,5.44561437714983,0,0,0,0,14.8292733010774,6.8625090422794,4.14659361972453,9.38651329038293,7.92717917724025,14.9607392082883,9.08551073179443,0,0,0,1.05220927943237,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.384341160854549,0.0937017245597288,1.03481348295606,0.862271971731369,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5144974282064,5.86556290561921,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2018448390722,11.2523219128515,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,7.71171159412337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5536277783674,1.26042765821917,2.32845630808958,5.78709994585299,13.3005175231705,13.1992925025532,13.1639216481697,7.61162372786498,0,0,0,0,0,0,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,7.82552902062201,6.30185064783336,12.0297227640581,5.48066015816514,9.06472676867641,6.07520250208625,6.75481804836331,9.9691329976525,4.65984280576638,6.53860289780313,6.3843979744165,2.39027048055788,1.21553358534147,1.25767897576789,1.10306105070008,1.11123363900808,0.824140228955577,1.28367683836726,0.758091635291392,0.50695859978048,0.377252682772152,1.12369808963859,1.21647789569252,0.861532034334199,0.476293691283074,0.463537303779422,0.77163688185482,0.412085900803307,0.735994600671987,1.37147700954166,0.887379030796687,0.476872379894642,1.30811774969096,1.12931256498397,1.01537529470012,0.914639864363863,1.57841826862706,0.271608227691724,1.68342681497322,0.830445126869219,0.985044823755635,1.22769312950907,0.619747364743864,0.385813221962283,1.99848462350357,1.87145286756327,1.28922632428979,0.382576664137687,0.441182838239031,0|short_description=p2@Rfx4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71137 | |||
|HGNC= | |||
|MCL_coexpression_id=2593 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TNK1 | |||
|association_with_transcript=0bp_to_ENSMUST00000060397_5end | |||
|cluster_id=chr10:84218800..84218829,+ | |||
|description=CAGE_peak_2_at_Rfx4_5end | |||
|id=chr10:84218800..84218829,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.98e-17!23;CL:0000337!6.98e-17!23;CL:0002319!5.61e-16!43;CL:0000221!2.54e-15!44;CL:0000133!2.54e-15!44;CL:0000055!5.52e-12!50;CL:0000540!1.27e-10!33;CL:0000047!1.27e-10!33;CL:0000031!1.27e-10!33;CL:0000404!1.27e-10!33;CL:0002453!7.61e-08!8;CL:0000393!1.08e-07!39;CL:0000211!1.08e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-21,23;CL:0000337,1.54e-21,23;CL:0002319,7.21e-18,43;CL:0000221,3.08e-17,44;CL:0000133,3.08e-17,44;CL:0000540,8.97e-13,33;CL:0000047,8.97e-13,33;CL:0000031,8.97e-13,33;CL:0000404,8.97e-13,33;CL:0000393,9.47e-10,39;CL:0000211,9.47e-10,39;CL:0002453,3.66e-08,8;CL:0002321,1.81e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.20e-42!73;UBERON:0005743!1.20e-42!73;UBERON:0000073!6.85e-42!75;UBERON:0001016!6.85e-42!75;UBERON:0001049!7.29e-40!52;UBERON:0005068!7.29e-40!52;UBERON:0006241!7.29e-40!52;UBERON:0007135!7.29e-40!52;UBERON:0000955!1.01e-38!50;UBERON:0006238!1.01e-38!50;UBERON:0002616!6.73e-38!49;UBERON:0000033!6.08e-34!63;UBERON:0002346!3.17e-30!71;UBERON:0003075!3.17e-30!71;UBERON:0007284!3.17e-30!71;UBERON:0003080!5.07e-30!40;UBERON:0004121!7.18e-30!102;UBERON:0000924!7.18e-30!102;UBERON:0006601!7.18e-30!102;UBERON:0003056!4.75e-29!49;UBERON:0002780!5.67e-29!39;UBERON:0001890!5.67e-29!39;UBERON:0006240!5.67e-29!39;UBERON:0002020!1.93e-24!34;UBERON:0002791!6.82e-21!29;UBERON:0003528!6.82e-21!29;UBERON:0001893!6.82e-21!29;UBERON:0000153!3.70e-19!94;UBERON:0007811!4.88e-19!86;UBERON:0000956!3.95e-15!21;UBERON:0001869!3.95e-15!21;UBERON:0000203!3.95e-15!21;UBERON:0002619!7.57e-13!17;UBERON:0003076!9.12e-10!12;UBERON:0003057!9.12e-10!12;UBERON:0001894!8.48e-09!10;UBERON:0006222!8.48e-09!10;UBERON:0002021!3.73e-08!10;UBERON:0000411!3.73e-08!10;UBERON:0001950!3.73e-08!10;UBERON:0000025!4.35e-08!114;UBERON:0000007!4.30e-07!8;UBERON:0003296!4.30e-07!8;UBERON:0010133!4.30e-07!8;UBERON:0002420!6.34e-07!8;UBERON:0007245!6.34e-07!8;UBERON:0010009!6.34e-07!8;UBERON:0010011!6.34e-07!8;UBERON:0000454!6.34e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.63e-53,73;UBERON:0000073,1.61e-52,54;UBERON:0001016,7.26e-51,75;UBERON:0001049,6.92e-50,52;UBERON:0005068,6.92e-50,52;UBERON:0006241,6.92e-50,52;UBERON:0007135,6.92e-50,52;UBERON:0000955,1.27e-44,47;UBERON:0006238,1.27e-44,47;UBERON:0002616,1.42e-43,46;UBERON:0002346,2.65e-40,64;UBERON:0003075,2.65e-40,64;UBERON:0007284,2.65e-40,64;UBERON:0003080,1.04e-38,40;UBERON:0004121,1.47e-38,95;UBERON:0000924,1.47e-38,95;UBERON:0006601,1.47e-38,95;UBERON:0002780,2.43e-37,39;UBERON:0001890,2.43e-37,39;UBERON:0006240,2.43e-37,39;UBERON:0010371,3.06e-33,73;UBERON:0003056,5.44e-32,49;UBERON:0002020,2.05e-31,34;UBERON:0003528,8.89e-27,29;UBERON:0002791,8.89e-27,29;UBERON:0001893,8.89e-27,29;UBERON:0010314,6.17e-23,92;UBERON:0000956,2.99e-19,21;UBERON:0001869,2.99e-19,21;UBERON:0000203,2.99e-19,21;UBERON:0002619,2.84e-16,17;UBERON:0000025,5.38e-14,114;UBERON:0004111,4.25e-12,122;UBERON:0001894,5.38e-11,10;UBERON:0006222,5.38e-11,10;UBERON:0003076,9.53e-11,12;UBERON:0003057,9.53e-11,12;UBERON:0002021,3.69e-10,10;UBERON:0000411,3.69e-10,10;UBERON:0001950,3.69e-10,10;UBERON:0000007,8.87e-09,8;UBERON:0003296,8.87e-09,8;UBERON:0010133,8.87e-09,8;UBERON:0002420,1.47e-08,8;UBERON:0007245,1.47e-08,8;UBERON:0010009,1.47e-08,8;UBERON:0010011,1.47e-08,8;UBERON:0000454,1.47e-08,8;UBERON:0011216,2.59e-08,194;UBERON:0001954,1.55e-07,7;UBERON:0003022,1.55e-07,7;UBERON:0002421,1.55e-07,7;UBERON:0000349,1.55e-07,7;UBERON:0002600,1.55e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,20.2763395433815,6.81027166476863,15.748821825017,14.1386285841616,20.125359011096,0,0,0,0,0,0,9.91350658212029,7.40587370980846,7.60597684207415,0.677689064138264,0.889294796111139,0,0,0,8.98800331555214,21.9004434033286,4.14758449233911,4.45519596494579,3.36519938162211,5.14171771926846,5.74258206474195,5.14461356702807,4.79227355091182,7.35375029288017,11.0115880999389,8.81042632787795,11.2132769277058,7.91317726381163,7.22752384459036,8.85552729946492,8.93385596804419,9.56696437053856,9.47349136216223,10.0173719061047,10.2507610175354,5.03278503728312,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2473278954042,5.44561437714983,0,0,0,0,14.8292733010774,6.8625090422794,4.14659361972453,9.38651329038293,7.92717917724025,14.9607392082883,9.08551073179443,0,0,0,1.05220927943237,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.384341160854549,0.0937017245597288,1.03481348295606,0.862271971731369,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5144974282064,5.86556290561921,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2018448390722,11.2523219128515,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,7.71171159412337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5536277783674,1.26042765821917,2.32845630808958,5.78709994585299,13.3005175231705,13.1992925025532,13.1639216481697,7.61162372786498,0,0,0,0,0,0,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,7.82552902062201,6.30185064783336,12.0297227640581,5.48066015816514,9.06472676867641,6.07520250208625,6.75481804836331,9.9691329976525,4.65984280576638,6.53860289780313,6.3843979744165,2.39027048055788,1.21553358534147,1.25767897576789,1.10306105070008,1.11123363900808,0.824140228955577,1.28367683836726,0.758091635291392,0.50695859978048,0.377252682772152,1.12369808963859,1.21647789569252,0.861532034334199,0.476293691283074,0.463537303779422,0.77163688185482,0.412085900803307,0.735994600671987,1.37147700954166,0.887379030796687,0.476872379894642,1.30811774969096,1.12931256498397,1.01537529470012,0.914639864363863,1.57841826862706,0.271608227691724,1.68342681497322,0.830445126869219,0.985044823755635,1.22769312950907,0.619747364743864,0.385813221962283,1.99848462350357,1.87145286756327,1.28922632428979,0.382576664137687,0.441182838239031,0 | |||
|short_description=p2@Rfx4 | |||
}} |
Revision as of 22:35, 4 August 2015
Short description: | p2@Rfx4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rfx4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2593 |
Association with transcript: | 0bp_to_ENSMUST00000060397_5end |
EntrezGene: | 71137 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.54e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.54e-21 | 23 |
neural cell | 7.21e-18 | 43 |
ectodermal cell | 3.08e-17 | 44 |
neurectodermal cell | 3.08e-17 | 44 |
neuron | 8.97e-13 | 33 |
neuronal stem cell | 8.97e-13 | 33 |
neuroblast | 8.97e-13 | 33 |
electrically signaling cell | 8.97e-13 | 33 |
electrically responsive cell | 9.47e-10 | 39 |
electrically active cell | 9.47e-10 | 39 |
oligodendrocyte precursor cell | 3.66e-08 | 8 |
embryonic cell | 1.81e-07 | 70 |