FFCP PHASE1:Mm9::chr13:105844929..105844944,-: Difference between revisions
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{{FFCP|EntrezGene=52882|HGNC=|MCL_coexpression_id=1|UniProt=Q8BQP9|association_with_transcript=65bp_to_ENSMUST00000063551,NM_029879,uc007rtp.1_5end|description=CAGE_peak_5_at_Rgs7bp_5end|id=chr13:105844929..105844944,-|ontology_enrichment_celltype=CL:0000117!1.16e-08!23;CL:0000337!1.16e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.45e-15,23;CL:0000337,4.45e-15,23;CL:0000540,1.73e-09,33;CL:0000047,1.73e-09,33;CL:0000031,1.73e-09,33;CL:0000404,1.73e-09,33;CL:0000393,1.56e-07,39;CL:0000211,1.56e-07,39;CL:0002610,6.79e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.55e-18!52;UBERON:0005068!2.55e-18!52;UBERON:0006241!2.55e-18!52;UBERON:0007135!2.55e-18!52;UBERON:0002346!4.32e-18!71;UBERON:0003075!4.32e-18!71;UBERON:0007284!4.32e-18!71;UBERON:0000955!3.22e-17!50;UBERON:0006238!3.22e-17!50;UBERON:0002616!1.47e-16!49;UBERON:0002020!2.40e-16!34;UBERON:0000033!3.46e-16!63;UBERON:0001017!6.60e-16!73;UBERON:0005743!6.60e-16!73;UBERON:0000073!1.59e-15!75;UBERON:0001016!1.59e-15!75;UBERON:0003080!2.05e-13!40;UBERON:0002791!2.74e-13!29;UBERON:0003528!2.74e-13!29;UBERON:0001893!2.74e-13!29;UBERON:0004121!2.88e-13!102;UBERON:0000924!2.88e-13!102;UBERON:0006601!2.88e-13!102;UBERON:0003056!3.22e-13!49;UBERON:0002780!9.43e-13!39;UBERON:0001890!9.43e-13!39;UBERON:0006240!9.43e-13!39;UBERON:0000956!4.60e-11!21;UBERON:0001869!4.60e-11!21;UBERON:0000203!4.60e-11!21;UBERON:0000153!3.72e-09!94;UBERON:0007811!4.23e-09!86;UBERON:0002021!5.52e-09!10;UBERON:0000411!5.52e-09!10;UBERON:0001950!5.52e-09!10;UBERON:0002619!7.60e-09!17;UBERON:0000025!1.07e-07!114;UBERON:0004111!3.87e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.69e-41,54;UBERON:0001049,9.81e-38,52;UBERON:0005068,9.81e-38,52;UBERON:0006241,9.81e-38,52;UBERON:0007135,9.81e-38,52;UBERON:0001017,3.32e-36,73;UBERON:0001016,5.25e-35,75;UBERON:0002020,3.11e-33,34;UBERON:0002346,4.15e-31,64;UBERON:0003075,4.15e-31,64;UBERON:0007284,4.15e-31,64;UBERON:0000955,6.38e-30,47;UBERON:0006238,6.38e-30,47;UBERON:0002616,2.50e-28,46;UBERON:0004121,2.28e-27,95;UBERON:0000924,2.28e-27,95;UBERON:0006601,2.28e-27,95;UBERON:0010371,2.92e-26,73;UBERON:0003528,2.40e-25,29;UBERON:0002791,2.40e-25,29;UBERON:0001893,2.40e-25,29;UBERON:0003080,2.05e-23,40;UBERON:0002780,7.92e-22,39;UBERON:0001890,7.92e-22,39;UBERON:0006240,7.92e-22,39;UBERON:0002021,1.11e-21,10;UBERON:0000411,1.11e-21,10;UBERON:0001950,1.11e-21,10;UBERON:0000956,1.42e-20,21;UBERON:0001869,1.42e-20,21;UBERON:0000203,1.42e-20,21;UBERON:0003056,1.03e-19,49;UBERON:0010314,3.83e-19,92;UBERON:0002619,5.17e-17,17;UBERON:0003076,3.95e-15,12;UBERON:0003057,3.95e-15,12;UBERON:0000025,7.69e-13,114;UBERON:0004111,1.77e-11,122;UBERON:0002240,2.96e-11,6;UBERON:0005174,2.96e-11,6;UBERON:0001137,2.96e-11,6;UBERON:0001948,2.26e-09,5;UBERON:0002315,2.26e-09,5;UBERON:0011216,8.40e-09,194;UBERON:0002950,3.89e-08,4;UBERON:0001891,3.89e-08,4;UBERON:0009616,3.89e-08,4;UBERON:0010286,3.89e-08,4;UBERON:0004684,6.79e-07,3;UBERON:0002275,6.79e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,0,0,0,0,0,0,0,0,1.14058573539325,0.540023753326763,1.26194976810829,1.99955689082663,1.54607978666129,0.979926393719632,0.575072826109418,0,3.30347642998166,4.85211884723713,7.37311359629969,0.395658863190582,0.0914876436024097,0,2.79182999001381,1.68828783009504,3.20876320331301,4.12480019663135,2.13557521198654,2.79599168737951,0,0.226714680320357,0,0,0,0,0,0.448026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0.884610551949874,0,0,0,1.86391761218122,8.19786231632332,6.28340120440365,0,0,0,0.127070227073065,7.18995069143149,11.8950156732843,2.51308704225729,12.5153510538439,6.64860189058859,7.06479351502504,7.78758062725237,0.101839363850316,0,0,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.340182495756639,0.2562274405697,0.0937017245597288,1.81092359517311,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0.36012412292203,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,10.5144974282064,2.16099685996497,0,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0,0,0,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:52882 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BQP9 | |||
|association_with_transcript=65bp_to_ENSMUST00000063551,NM_029879,uc007rtp.1_5end | |||
|cluster_id=chr13:105844929..105844944,- | |||
|description=CAGE_peak_5_at_Rgs7bp_5end | |||
|id=chr13:105844929..105844944,- | |||
|ontology_enrichment_celltype=CL:0000117!1.16e-08!23;CL:0000337!1.16e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.45e-15,23;CL:0000337,4.45e-15,23;CL:0000540,1.73e-09,33;CL:0000047,1.73e-09,33;CL:0000031,1.73e-09,33;CL:0000404,1.73e-09,33;CL:0000393,1.56e-07,39;CL:0000211,1.56e-07,39;CL:0002610,6.79e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.55e-18!52;UBERON:0005068!2.55e-18!52;UBERON:0006241!2.55e-18!52;UBERON:0007135!2.55e-18!52;UBERON:0002346!4.32e-18!71;UBERON:0003075!4.32e-18!71;UBERON:0007284!4.32e-18!71;UBERON:0000955!3.22e-17!50;UBERON:0006238!3.22e-17!50;UBERON:0002616!1.47e-16!49;UBERON:0002020!2.40e-16!34;UBERON:0000033!3.46e-16!63;UBERON:0001017!6.60e-16!73;UBERON:0005743!6.60e-16!73;UBERON:0000073!1.59e-15!75;UBERON:0001016!1.59e-15!75;UBERON:0003080!2.05e-13!40;UBERON:0002791!2.74e-13!29;UBERON:0003528!2.74e-13!29;UBERON:0001893!2.74e-13!29;UBERON:0004121!2.88e-13!102;UBERON:0000924!2.88e-13!102;UBERON:0006601!2.88e-13!102;UBERON:0003056!3.22e-13!49;UBERON:0002780!9.43e-13!39;UBERON:0001890!9.43e-13!39;UBERON:0006240!9.43e-13!39;UBERON:0000956!4.60e-11!21;UBERON:0001869!4.60e-11!21;UBERON:0000203!4.60e-11!21;UBERON:0000153!3.72e-09!94;UBERON:0007811!4.23e-09!86;UBERON:0002021!5.52e-09!10;UBERON:0000411!5.52e-09!10;UBERON:0001950!5.52e-09!10;UBERON:0002619!7.60e-09!17;UBERON:0000025!1.07e-07!114;UBERON:0004111!3.87e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.69e-41,54;UBERON:0001049,9.81e-38,52;UBERON:0005068,9.81e-38,52;UBERON:0006241,9.81e-38,52;UBERON:0007135,9.81e-38,52;UBERON:0001017,3.32e-36,73;UBERON:0001016,5.25e-35,75;UBERON:0002020,3.11e-33,34;UBERON:0002346,4.15e-31,64;UBERON:0003075,4.15e-31,64;UBERON:0007284,4.15e-31,64;UBERON:0000955,6.38e-30,47;UBERON:0006238,6.38e-30,47;UBERON:0002616,2.50e-28,46;UBERON:0004121,2.28e-27,95;UBERON:0000924,2.28e-27,95;UBERON:0006601,2.28e-27,95;UBERON:0010371,2.92e-26,73;UBERON:0003528,2.40e-25,29;UBERON:0002791,2.40e-25,29;UBERON:0001893,2.40e-25,29;UBERON:0003080,2.05e-23,40;UBERON:0002780,7.92e-22,39;UBERON:0001890,7.92e-22,39;UBERON:0006240,7.92e-22,39;UBERON:0002021,1.11e-21,10;UBERON:0000411,1.11e-21,10;UBERON:0001950,1.11e-21,10;UBERON:0000956,1.42e-20,21;UBERON:0001869,1.42e-20,21;UBERON:0000203,1.42e-20,21;UBERON:0003056,1.03e-19,49;UBERON:0010314,3.83e-19,92;UBERON:0002619,5.17e-17,17;UBERON:0003076,3.95e-15,12;UBERON:0003057,3.95e-15,12;UBERON:0000025,7.69e-13,114;UBERON:0004111,1.77e-11,122;UBERON:0002240,2.96e-11,6;UBERON:0005174,2.96e-11,6;UBERON:0001137,2.96e-11,6;UBERON:0001948,2.26e-09,5;UBERON:0002315,2.26e-09,5;UBERON:0011216,8.40e-09,194;UBERON:0002950,3.89e-08,4;UBERON:0001891,3.89e-08,4;UBERON:0009616,3.89e-08,4;UBERON:0010286,3.89e-08,4;UBERON:0004684,6.79e-07,3;UBERON:0002275,6.79e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,0,0,0,0,0,0,0,0,1.14058573539325,0.540023753326763,1.26194976810829,1.99955689082663,1.54607978666129,0.979926393719632,0.575072826109418,0,3.30347642998166,4.85211884723713,7.37311359629969,0.395658863190582,0.0914876436024097,0,2.79182999001381,1.68828783009504,3.20876320331301,4.12480019663135,2.13557521198654,2.79599168737951,0,0.226714680320357,0,0,0,0,0,0.448026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0.884610551949874,0,0,0,1.86391761218122,8.19786231632332,6.28340120440365,0,0,0,0.127070227073065,7.18995069143149,11.8950156732843,2.51308704225729,12.5153510538439,6.64860189058859,7.06479351502504,7.78758062725237,0.101839363850316,0,0,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.340182495756639,0.2562274405697,0.0937017245597288,1.81092359517311,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0.36012412292203,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,10.5144974282064,2.16099685996497,0,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0,0,0,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0,0,0.144649058581512,0,0,0,0,6.74312477948726,4.68846746368813,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0,0,0,5.14114106274891,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.658196082408484,0,0,0,0,0,0.161464426695906,0.663442174209714,0.119372344003136,0,0.291480836629851,7.23158677840988,0,0,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,0,0.324016022465404,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0.965947970160952,0,0,0,0,5.64751842617067,7.36520378411483,8.59343270159095,5.15559547031063,9.59115527678899,11.3309084608455,9.45031500324528,9.00642406448441,14.5005570874945,18.1216109113137,0.103787347584177,0,0.512200817262403,0.486213434136588,0.419226325255965,0.551530525350042,1.11123363900808,0.412070114477788,0,0.252697211763798,0.760437899670719,0.188626341386076,0.187283014939765,0.320125762024346,0.574354689556133,0.952587382566147,1.15884325944855,0.38581844092741,0,0.588795680537589,0,0.354951612318675,0.238436189947321,0.436039249896986,0.282328141245992,0.592302255241736,0.73171189149109,0,0.407412341537585,0,0.118635018124174,0.492522411877817,0.409231043169689,0.619747364743864,0.192906610981141,0.249810577937946,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0.463735671240843 | |||
|short_description=p5@Rgs7bp | |||
}} |
Revision as of 13:49, 5 August 2015
Short description: | p5@Rgs7bp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rgs7bp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 65bp_to_ENSMUST00000063551, NM_029879, uc007rtp.1_5end |
EntrezGene: | 52882 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.45e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.45e-15 | 23 |
neuron | 1.73e-09 | 33 |
neuronal stem cell | 1.73e-09 | 33 |
neuroblast | 1.73e-09 | 33 |
electrically signaling cell | 1.73e-09 | 33 |
electrically responsive cell | 1.56e-07 | 39 |
electrically active cell | 1.56e-07 | 39 |
raphe nuclei neuron | 6.79e-07 | 3 |