FFCP PHASE1:Mm9::chr11:120211158..120211176,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:120211158..120211176,- | |||
|description=CAGE_peak_at_chr11:120211158..120211176,- | |description=CAGE_peak_at_chr11:120211158..120211176,- | ||
|id=chr11:120211158..120211176,- | |id=chr11:120211158..120211176,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.87e-14,9;CL:0002251,1.87e-14,9;CL:0002076,2.92e-13,15;CL:0000066,2.86e-11,25;CL:0000075,1.13e-09,7;CL:0000223,1.49e-09,20;CL:0002250,1.66e-09,3;CL:0000239,2.43e-07,6;CL:0000677,2.43e-07,6;CL:0000584,2.43e-07,6;CL:0000197,8.68e-07,2;CL:0002491,8.68e-07,2;CL:0000098,8.68e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.81e-10,3;DOID:4045,5.81e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0000485!8.39e-07!11 | |ontology_enrichment_uberon=UBERON:0000485!8.39e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,2.11e-19,11;UBERON:0003350,1.87e-14,9;UBERON:0004808,1.87e-14,9;UBERON:0001277,1.87e-14,9;UBERON:0001242,1.06e-09,13;UBERON:0001262,1.06e-09,13;UBERON:0004786,1.06e-09,13;UBERON:0000344,2.81e-08,15;UBERON:0004766,8.68e-07,2;UBERON:0008193,8.68e-07,2;UBERON:0005913,8.68e-07,2;UBERON:0011158,8.68e-07,2;UBERON:0005744,8.68e-07,2;UBERON:0003457,8.68e-07,2;UBERON:0008001,8.68e-07,2;UBERON:0007497,8.68e-07,2;UBERON:0009955,8.68e-07,2;UBERON:0003067,8.68e-07,2;UBERON:0002546,8.68e-07,2;UBERON:0007914,8.68e-07,2;UBERON:0005253,8.68e-07,2;UBERON:0002227,8.68e-07,2;UBERON:0001846,8.68e-07,2;UBERON:0004339,8.68e-07,2;UBERON:0002105,8.68e-07,2;UBERON:0001678,8.68e-07,2;UBERON:0003128,8.68e-07,2;UBERON:0001694,8.68e-07,2;UBERON:0004681,8.68e-07,2;UBERON:0001839,8.68e-07,2;UBERON:0001690,8.68e-07,2;UBERON:0001844,8.68e-07,2;UBERON:0001849,8.68e-07,2;UBERON:0002499,8.68e-07,2;UBERON:0001855,8.68e-07,2;UBERON:0011137,8.68e-07,2;UBERON:0001703,8.68e-07,2;UBERON:0010323,8.68e-07,2;UBERON:0003129,8.68e-07,2;UBERON:0003069,8.68e-07,2;UBERON:0003051,8.68e-07,2;UBERON:0004637,8.68e-07,2;UBERON:0004761,8.68e-07,2;UBERON:0010113,8.68e-07,2;UBERON:0009123,8.68e-07,2;UBERON:0010351,8.68e-07,2;UBERON:0009617,8.68e-07,2;UBERON:0005641,8.68e-07,2;UBERON:0010349,8.68e-07,2 | |||
|phase1_expression=1.92178616525753,0.348975407639361,0,1.51232105653415,1.00179145989269,1.84667199103079,2.33612640595526,0.516493293766305,0.985521055061667,3.04283884218592,1.88339765048055,1.03703806693937,0.856003649656029,0.611942816932982,0,0,0,0.630924330716475,0.548457734422955,0,0.255129870453209,0,0,0,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0,0.443461021310609,0.635030673459631,0,0,2.59966457776147,2.1610503896604,3.87921776898501,4.60384793810598,3.906676722619,8.37637990358077,17.0587131528994,12.9778642142105,5.82612423637384,0,0.202753862439029,0.183546752161682,0.782391344348039,0,0,0,0,0,1.34226084846189,0.725362142011344,1.00828139742739,0,0.286533439938757,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0.35333957451034,3.80277233397037,0,0,0,1.08245520505607,1.01343946190039,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,0.599075622529601,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0.101839363850316,0,0.758168275301024,0.210441855886474,0,0.229902104433473,0,0,0,0,0.0937017245597288,0.517406741478031,0,0,0.351902248327898,0,0,0,0,0,2.1066395619397,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0.536546802799238,0,0.16455984991348,0.492502392237286,0.162137619091711,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0,0.38992817423824,0.898819408654221,0,0.398282546508734,0.189667900953082,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.442830443938806,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,1.10851914099963,0,0.162964976442026,0.169745085775188,0.234690248288502,0.502518772325447,1.19021820443007,0.585400943573396,0.788175720530955,0.44292937929755,0.478364305972461,0.81931657357869,0.518054945597687,1.01254341007058,0,0,0.491764273019036,0.551873492609465,0,0,0.491804836130026,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,1.03135543248187,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.704015124191131,0,0.441056796109924,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0.854354403989263,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,1.69978429993855,2.23922323717853,1.52019971184866,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0,0.269728692769641,0.578574190077352,0.523511883968059,0.129614973291793,1.24267862617385,0,0.149516546043979,0,0,0,0,0.234714477291508,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0.537080087002444,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.38983152295901,0,0.233753804363138,0.226730383615211,0,0.179427713218951,0.167884616364078,0.19318959403219,0.375364950902364,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.376437521661322,0.0846146078916765,0.365855945745545,0,0,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0.661774257358546,0 | |phase1_expression=1.92178616525753,0.348975407639361,0,1.51232105653415,1.00179145989269,1.84667199103079,2.33612640595526,0.516493293766305,0.985521055061667,3.04283884218592,1.88339765048055,1.03703806693937,0.856003649656029,0.611942816932982,0,0,0,0.630924330716475,0.548457734422955,0,0.255129870453209,0,0,0,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0,0.443461021310609,0.635030673459631,0,0,2.59966457776147,2.1610503896604,3.87921776898501,4.60384793810598,3.906676722619,8.37637990358077,17.0587131528994,12.9778642142105,5.82612423637384,0,0.202753862439029,0.183546752161682,0.782391344348039,0,0,0,0,0,1.34226084846189,0.725362142011344,1.00828139742739,0,0.286533439938757,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0.35333957451034,3.80277233397037,0,0,0,1.08245520505607,1.01343946190039,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,0.599075622529601,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0.101839363850316,0,0.758168275301024,0.210441855886474,0,0.229902104433473,0,0,0,0,0.0937017245597288,0.517406741478031,0,0,0.351902248327898,0,0,0,0,0,2.1066395619397,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0.536546802799238,0,0.16455984991348,0.492502392237286,0.162137619091711,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0,0.38992817423824,0.898819408654221,0,0.398282546508734,0.189667900953082,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.442830443938806,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,1.10851914099963,0,0.162964976442026,0.169745085775188,0.234690248288502,0.502518772325447,1.19021820443007,0.585400943573396,0.788175720530955,0.44292937929755,0.478364305972461,0.81931657357869,0.518054945597687,1.01254341007058,0,0,0.491764273019036,0.551873492609465,0,0,0.491804836130026,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,1.03135543248187,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.704015124191131,0,0.441056796109924,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0.854354403989263,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,1.69978429993855,2.23922323717853,1.52019971184866,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0,0.269728692769641,0.578574190077352,0.523511883968059,0.129614973291793,1.24267862617385,0,0.149516546043979,0,0,0,0,0.234714477291508,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0.537080087002444,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.38983152295901,0,0.233753804363138,0.226730383615211,0,0.179427713218951,0.167884616364078,0.19318959403219,0.375364950902364,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.376437521661322,0.0846146078916765,0.365855945745545,0,0,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0.661774257358546,0 | ||
|short_description=p@chr11:120211158..120211176,- | |short_description=p@chr11:120211158..120211176,- | ||
}} | }} |
Latest revision as of 14:54, 5 August 2015
Short description: | p@chr11:120211158..120211176, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:120211158..120211176, - |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.87e-14 | 9 |
epithelial cell of alimentary canal | 1.87e-14 | 9 |
endo-epithelial cell | 2.92e-13 | 15 |
epithelial cell | 2.86e-11 | 25 |
columnar/cuboidal epithelial cell | 1.13e-09 | 7 |
endodermal cell | 1.49e-09 | 20 |
intestinal crypt stem cell | 1.66e-09 | 3 |
brush border epithelial cell | 2.43e-07 | 6 |
gut absorptive cell | 2.43e-07 | 6 |
enterocyte | 2.43e-07 | 6 |
receptor cell | 8.68e-07 | 2 |
auditory epithelial cell | 8.68e-07 | 2 |
sensory epithelial cell | 8.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.81e-10 | 3 |
muscle cancer | 5.81e-10 | 3 |