FFCP PHASE1:Mm9::chr3:19460250..19460260,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=896 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000083241_5end | |association_with_transcript=0bp_to_ENSMUST00000083241_5end | ||
|cluster_id=chr3:19460250..19460260,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000083241_5end | |description=CAGE_peak_1_at_ENSMUST00000083241_5end | ||
|id=chr3:19460250..19460260,+ | |id=chr3:19460250..19460260,+ | ||
|ontology_enrichment_celltype=CL:0002371!1.62e-29!118;CL:0000144!5.24e-29!121;CL:0000012!5.24e-29!121;CL:0000548!1.18e-28!115;CL:0000004!1.18e-28!115;CL:0000255!1.18e-28!115;CL:0000034!1.91e-28!97;CL:0000723!5.00e-28!91;CL:0000048!5.00e-28!91;CL:0002321!1.26e-20!70;CL:0000220!1.26e-20!70;CL:0000055!2.01e-19!50;CL:0002319!3.28e-19!43;CL:0000221!4.02e-18!44;CL:0000133!4.02e-18!44;CL:0000540!4.20e-15!33;CL:0000047!4.20e-15!33;CL:0000031!4.20e-15!33;CL:0000404!4.20e-15!33;CL:0000393!5.64e-15!39;CL:0000211!5.64e-15!39;CL:0000219!1.79e-13!54;CL:0000117!5.07e-13!23;CL:0000337!5.07e-13!23;CL:0002320!1.06e-10!46;CL:0000134!1.06e-10!46;CL:0000063!2.59e-08!66;CL:0002031!1.27e-07!25;CL:0000839!3.27e-07!13 | |ontology_enrichment_celltype=CL:0002371!1.62e-29!118;CL:0000144!5.24e-29!121;CL:0000012!5.24e-29!121;CL:0000548!1.18e-28!115;CL:0000004!1.18e-28!115;CL:0000255!1.18e-28!115;CL:0000034!1.91e-28!97;CL:0000723!5.00e-28!91;CL:0000048!5.00e-28!91;CL:0002321!1.26e-20!70;CL:0000220!1.26e-20!70;CL:0000055!2.01e-19!50;CL:0002319!3.28e-19!43;CL:0000221!4.02e-18!44;CL:0000133!4.02e-18!44;CL:0000540!4.20e-15!33;CL:0000047!4.20e-15!33;CL:0000031!4.20e-15!33;CL:0000404!4.20e-15!33;CL:0000393!5.64e-15!39;CL:0000211!5.64e-15!39;CL:0000219!1.79e-13!54;CL:0000117!5.07e-13!23;CL:0000337!5.07e-13!23;CL:0002320!1.06e-10!46;CL:0000134!1.06e-10!46;CL:0000063!2.59e-08!66;CL:0002031!1.27e-07!25;CL:0000839!3.27e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,3.99e-39,91;CL:0000048,3.99e-39,91;CL:0000034,6.79e-39,97;CL:0002321,2.54e-31,70;CL:0002319,6.05e-29,43;CL:0000221,5.87e-28,44;CL:0000133,5.87e-28,44;CL:0000540,4.16e-24,33;CL:0000047,4.16e-24,33;CL:0000031,4.16e-24,33;CL:0000404,4.16e-24,33;CL:0000393,1.42e-23,39;CL:0000211,1.42e-23,39;CL:0000117,5.48e-20,23;CL:0000337,5.48e-20,23;CL:0000219,1.43e-16,54;CL:0002320,1.59e-13,46;CL:0000134,1.59e-13,46;CL:0000839,1.42e-09,13;CL:0002031,1.59e-09,25;CL:0002453,1.01e-07,8;CL:0000763,4.18e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.61e-16!75;UBERON:0001016!4.61e-16!75;UBERON:0001017!5.73e-16!73;UBERON:0005743!5.73e-16!73;UBERON:0002020!1.68e-12!34;UBERON:0002384!1.06e-10!46;UBERON:0002791!5.46e-10!29;UBERON:0003528!5.46e-10!29;UBERON:0001893!5.46e-10!29;UBERON:0000956!7.53e-09!21;UBERON:0001869!7.53e-09!21;UBERON:0000203!7.53e-09!21;UBERON:0004121!1.08e-08!102;UBERON:0000924!1.08e-08!102;UBERON:0006601!1.08e-08!102;UBERON:0001049!1.62e-08!52;UBERON:0005068!1.62e-08!52;UBERON:0006241!1.62e-08!52;UBERON:0007135!1.62e-08!52;UBERON:0002616!3.15e-08!49;UBERON:0000955!3.40e-08!50;UBERON:0006238!3.40e-08!50;UBERON:0002619!7.98e-08!17;UBERON:0002021!4.78e-07!10;UBERON:0000411!4.78e-07!10;UBERON:0001950!4.78e-07!10;UBERON:0003080!6.66e-07!40;UBERON:0002780!8.58e-07!39;UBERON:0001890!8.58e-07!39;UBERON:0006240!8.58e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.63e-23,73;UBERON:0001016,1.99e-22,75;UBERON:0002020,3.05e-20,34;UBERON:0003528,3.84e-16,29;UBERON:0002791,3.84e-16,29;UBERON:0001893,3.84e-16,29;UBERON:0004121,5.65e-15,95;UBERON:0000924,5.65e-15,95;UBERON:0006601,5.65e-15,95;UBERON:0000073,3.45e-14,54;UBERON:0002384,1.59e-13,46;UBERON:0000956,5.27e-13,21;UBERON:0001869,5.27e-13,21;UBERON:0000203,5.27e-13,21;UBERON:0002619,4.58e-12,17;UBERON:0001049,9.81e-12,52;UBERON:0005068,9.81e-12,52;UBERON:0006241,9.81e-12,52;UBERON:0007135,9.81e-12,52;UBERON:0002021,2.17e-10,10;UBERON:0000411,2.17e-10,10;UBERON:0001950,2.17e-10,10;UBERON:0002346,6.72e-10,64;UBERON:0003075,6.72e-10,64;UBERON:0007284,6.72e-10,64;UBERON:0002780,6.87e-10,39;UBERON:0001890,6.87e-10,39;UBERON:0006240,6.87e-10,39;UBERON:0003080,1.90e-09,40;UBERON:0002616,5.27e-09,46;UBERON:0000955,1.22e-08,47;UBERON:0006238,1.22e-08,47;UBERON:0010371,1.98e-07,73;UBERON:0011216,5.64e-07,194;UBERON:0002371,7.35e-07,16 | |||
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| ||
|short_description=p1@ENSMUST00000083241 | |short_description=p1@ENSMUST00000083241 | ||
}} | }} |
Latest revision as of 07:25, 6 August 2015
Short description: | p1@ENSMUST00000083241 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000083241_5end |
Coexpression cluster: | MCL_coexpression_mm9:896 |
Association with transcript: | 0bp_to_ENSMUST00000083241_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 3.99e-39 | 91 |
multi fate stem cell | 3.99e-39 | 91 |
stem cell | 6.79e-39 | 97 |
embryonic cell | 2.54e-31 | 70 |
neural cell | 6.05e-29 | 43 |
ectodermal cell | 5.87e-28 | 44 |
neurectodermal cell | 5.87e-28 | 44 |
neuron | 4.16e-24 | 33 |
neuronal stem cell | 4.16e-24 | 33 |
neuroblast | 4.16e-24 | 33 |
electrically signaling cell | 4.16e-24 | 33 |
electrically responsive cell | 1.42e-23 | 39 |
electrically active cell | 1.42e-23 | 39 |
CNS neuron (sensu Vertebrata) | 5.48e-20 | 23 |
neuroblast (sensu Vertebrata) | 5.48e-20 | 23 |
motile cell | 1.43e-16 | 54 |
connective tissue cell | 1.59e-13 | 46 |
mesenchymal cell | 1.59e-13 | 46 |
myeloid lineage restricted progenitor cell | 1.42e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 1.59e-09 | 25 |
oligodendrocyte precursor cell | 1.01e-07 | 8 |
myeloid cell | 4.18e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.63e-23 | 73 |
nervous system | 1.99e-22 | 75 |
gray matter | 3.05e-20 | 34 |
brain grey matter | 3.84e-16 | 29 |
regional part of telencephalon | 3.84e-16 | 29 |
telencephalon | 3.84e-16 | 29 |
ectoderm-derived structure | 5.65e-15 | 95 |
ectoderm | 5.65e-15 | 95 |
presumptive ectoderm | 5.65e-15 | 95 |
regional part of nervous system | 3.45e-14 | 54 |
connective tissue | 1.59e-13 | 46 |
cerebral cortex | 5.27e-13 | 21 |
cerebral hemisphere | 5.27e-13 | 21 |
pallium | 5.27e-13 | 21 |
regional part of cerebral cortex | 4.58e-12 | 17 |
neural tube | 9.81e-12 | 52 |
neural rod | 9.81e-12 | 52 |
future spinal cord | 9.81e-12 | 52 |
neural keel | 9.81e-12 | 52 |
occipital lobe | 2.17e-10 | 10 |
visual cortex | 2.17e-10 | 10 |
neocortex | 2.17e-10 | 10 |
neurectoderm | 6.72e-10 | 64 |
neural plate | 6.72e-10 | 64 |
presumptive neural plate | 6.72e-10 | 64 |
regional part of forebrain | 6.87e-10 | 39 |
forebrain | 6.87e-10 | 39 |
future forebrain | 6.87e-10 | 39 |
anterior neural tube | 1.90e-09 | 40 |
regional part of brain | 5.27e-09 | 46 |
brain | 1.22e-08 | 47 |
future brain | 1.22e-08 | 47 |
ecto-epithelium | 1.98e-07 | 73 |
organ system subdivision | 5.64e-07 | 194 |
bone marrow | 7.35e-07 | 16 |