FFCP PHASE1:Mm9::chrX:7499494..7499535,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=980|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:7499494..7499535,+|id=chrX:7499494..7499535,+|ontology_enrichment_celltype=CL:0000540!1.29e-12!33;CL:0000047!1.29e-12!33;CL:0000031!1.29e-12!33;CL:0000404!1.29e-12!33;CL:0000117!6.09e-12!23;CL:0000337!6.09e-12!23;CL:0002319!2.80e-11!43;CL:0000221!1.01e-10!44;CL:0000133!1.01e-10!44;CL:0000393!2.10e-09!39;CL:0000211!2.10e-09!39;CL:0000055!2.32e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.50e-13,23;CL:0000337,1.50e-13,23;CL:0000540,3.85e-10,33;CL:0000047,3.85e-10,33;CL:0000031,3.85e-10,33;CL:0000404,3.85e-10,33;CL:0002319,8.00e-09,43;CL:0000221,1.71e-08,44;CL:0000133,1.71e-08,44;CL:0000393,8.59e-08,39;CL:0000211,8.59e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.44e-34!73;UBERON:0005743!5.44e-34!73;UBERON:0000073!2.91e-32!75;UBERON:0001016!2.91e-32!75;UBERON:0002346!4.70e-31!71;UBERON:0003075!4.70e-31!71;UBERON:0007284!4.70e-31!71;UBERON:0004121!9.18e-30!102;UBERON:0000924!9.18e-30!102;UBERON:0006601!9.18e-30!102;UBERON:0001049!1.14e-26!52;UBERON:0005068!1.14e-26!52;UBERON:0006241!1.14e-26!52;UBERON:0007135!1.14e-26!52;UBERON:0000955!3.34e-25!50;UBERON:0006238!3.34e-25!50;UBERON:0002616!2.30e-24!49;UBERON:0000033!8.98e-23!63;UBERON:0003080!9.14e-21!40;UBERON:0003056!1.88e-20!49;UBERON:0002780!6.64e-20!39;UBERON:0001890!6.64e-20!39;UBERON:0006240!6.64e-20!39;UBERON:0002020!2.31e-18!34;UBERON:0002791!7.49e-15!29;UBERON:0003528!7.49e-15!29;UBERON:0001893!7.49e-15!29;UBERON:0007811!7.93e-11!86;UBERON:0000956!1.18e-09!21;UBERON:0001869!1.18e-09!21;UBERON:0000203!1.18e-09!21;UBERON:0000153!8.12e-09!94;UBERON:0002619!2.71e-08!17;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.68e-37,73;UBERON:0001016,4.16e-36,75;UBERON:0000073,5.22e-35,54;UBERON:0001049,1.36e-32,52;UBERON:0005068,1.36e-32,52;UBERON:0006241,1.36e-32,52;UBERON:0007135,1.36e-32,52;UBERON:0000955,1.40e-26,47;UBERON:0006238,1.40e-26,47;UBERON:0004121,1.99e-25,95;UBERON:0000924,1.99e-25,95;UBERON:0006601,1.99e-25,95;UBERON:0002616,2.59e-25,46;UBERON:0002346,3.29e-24,64;UBERON:0003075,3.29e-24,64;UBERON:0007284,3.29e-24,64;UBERON:0003080,4.90e-22,40;UBERON:0002020,1.05e-21,34;UBERON:0002780,9.67e-21,39;UBERON:0001890,9.67e-21,39;UBERON:0006240,9.67e-21,39;UBERON:0010371,9.23e-20,73;UBERON:0010314,2.40e-17,92;UBERON:0003056,2.36e-16,49;UBERON:0003528,3.64e-16,29;UBERON:0002791,3.64e-16,29;UBERON:0001893,3.64e-16,29;UBERON:0002021,3.58e-12,10;UBERON:0000411,3.58e-12,10;UBERON:0001950,3.58e-12,10;UBERON:0003076,5.42e-11,12;UBERON:0003057,5.42e-11,12;UBERON:0002420,2.24e-10,8;UBERON:0007245,2.24e-10,8;UBERON:0010009,2.24e-10,8;UBERON:0010011,2.24e-10,8;UBERON:0000454,2.24e-10,8;UBERON:0002619,3.77e-09,17;UBERON:0002240,1.08e-08,6;UBERON:0005174,1.08e-08,6;UBERON:0001137,1.08e-08,6;UBERON:0000025,1.20e-08,114;UBERON:0000956,2.42e-08,21;UBERON:0001869,2.42e-08,21;UBERON:0000203,2.42e-08,21;UBERON:0004111,2.08e-07,122;UBERON:0001948,2.74e-07,5;UBERON:0002315,2.74e-07,5;UBERON:0002950,7.16e-07,4;UBERON:0001891,7.16e-07,4;UBERON:0009616,7.16e-07,4;UBERON:0010286,7.16e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,1.26766280701236,0,0,0,0,0,7.19040265244171,21.1320067926855,0.207379224616955,0.945041568321835,0.630974884054146,4.28476476605705,5.07997644188711,0.857435594504678,0.191690942036473,0,5.50579404996943,6.76742891851495,4.45458946443106,2.37395317914349,2.19570344645783,2.6045668527838,9.49222196604695,4.50210088025344,8.09830713217094,7.07108605136802,4.41352210477219,2.98239113320481,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,5.19547486726887,0.867426633830679,1.52232739156071,0.922461989024234,1.3565037649736,2.93971767839262,0.251333182659351,0,0.289198713839823,0,0,0,0,1.86391761218122,3.51336956413857,19.4785437336513,0.255457055208591,0,0,0,11.0845073159569,8.23501085073528,1.88481528169297,9.38651329038293,3.06858548796397,15.584103341967,2.27137768294861,0.305518091550949,0,0,0,0.260240885925407,0,0.360124259610698,0.150704817835715,0.612328492361951,0.512454881139399,0.468508622798644,0.776110112217047,0,0,0,0.43839146485515,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72927835405207,2.05809224758569,0,0,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0.251335208800269,1.39269530428806,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86697890940181,5.15731421005694,0,0,0.315508219416257,0.780877488593277,0.4308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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=980 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:7499494..7499535,+ | |||
|description=CAGE_peak_at_chrX:7499494..7499535,+ | |||
|id=chrX:7499494..7499535,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.29e-12!33;CL:0000047!1.29e-12!33;CL:0000031!1.29e-12!33;CL:0000404!1.29e-12!33;CL:0000117!6.09e-12!23;CL:0000337!6.09e-12!23;CL:0002319!2.80e-11!43;CL:0000221!1.01e-10!44;CL:0000133!1.01e-10!44;CL:0000393!2.10e-09!39;CL:0000211!2.10e-09!39;CL:0000055!2.32e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.50e-13,23;CL:0000337,1.50e-13,23;CL:0000540,3.85e-10,33;CL:0000047,3.85e-10,33;CL:0000031,3.85e-10,33;CL:0000404,3.85e-10,33;CL:0002319,8.00e-09,43;CL:0000221,1.71e-08,44;CL:0000133,1.71e-08,44;CL:0000393,8.59e-08,39;CL:0000211,8.59e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.44e-34!73;UBERON:0005743!5.44e-34!73;UBERON:0000073!2.91e-32!75;UBERON:0001016!2.91e-32!75;UBERON:0002346!4.70e-31!71;UBERON:0003075!4.70e-31!71;UBERON:0007284!4.70e-31!71;UBERON:0004121!9.18e-30!102;UBERON:0000924!9.18e-30!102;UBERON:0006601!9.18e-30!102;UBERON:0001049!1.14e-26!52;UBERON:0005068!1.14e-26!52;UBERON:0006241!1.14e-26!52;UBERON:0007135!1.14e-26!52;UBERON:0000955!3.34e-25!50;UBERON:0006238!3.34e-25!50;UBERON:0002616!2.30e-24!49;UBERON:0000033!8.98e-23!63;UBERON:0003080!9.14e-21!40;UBERON:0003056!1.88e-20!49;UBERON:0002780!6.64e-20!39;UBERON:0001890!6.64e-20!39;UBERON:0006240!6.64e-20!39;UBERON:0002020!2.31e-18!34;UBERON:0002791!7.49e-15!29;UBERON:0003528!7.49e-15!29;UBERON:0001893!7.49e-15!29;UBERON:0007811!7.93e-11!86;UBERON:0000956!1.18e-09!21;UBERON:0001869!1.18e-09!21;UBERON:0000203!1.18e-09!21;UBERON:0000153!8.12e-09!94;UBERON:0002619!2.71e-08!17;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.68e-37,73;UBERON:0001016,4.16e-36,75;UBERON:0000073,5.22e-35,54;UBERON:0001049,1.36e-32,52;UBERON:0005068,1.36e-32,52;UBERON:0006241,1.36e-32,52;UBERON:0007135,1.36e-32,52;UBERON:0000955,1.40e-26,47;UBERON:0006238,1.40e-26,47;UBERON:0004121,1.99e-25,95;UBERON:0000924,1.99e-25,95;UBERON:0006601,1.99e-25,95;UBERON:0002616,2.59e-25,46;UBERON:0002346,3.29e-24,64;UBERON:0003075,3.29e-24,64;UBERON:0007284,3.29e-24,64;UBERON:0003080,4.90e-22,40;UBERON:0002020,1.05e-21,34;UBERON:0002780,9.67e-21,39;UBERON:0001890,9.67e-21,39;UBERON:0006240,9.67e-21,39;UBERON:0010371,9.23e-20,73;UBERON:0010314,2.40e-17,92;UBERON:0003056,2.36e-16,49;UBERON:0003528,3.64e-16,29;UBERON:0002791,3.64e-16,29;UBERON:0001893,3.64e-16,29;UBERON:0002021,3.58e-12,10;UBERON:0000411,3.58e-12,10;UBERON:0001950,3.58e-12,10;UBERON:0003076,5.42e-11,12;UBERON:0003057,5.42e-11,12;UBERON:0002420,2.24e-10,8;UBERON:0007245,2.24e-10,8;UBERON:0010009,2.24e-10,8;UBERON:0010011,2.24e-10,8;UBERON:0000454,2.24e-10,8;UBERON:0002619,3.77e-09,17;UBERON:0002240,1.08e-08,6;UBERON:0005174,1.08e-08,6;UBERON:0001137,1.08e-08,6;UBERON:0000025,1.20e-08,114;UBERON:0000956,2.42e-08,21;UBERON:0001869,2.42e-08,21;UBERON:0000203,2.42e-08,21;UBERON:0004111,2.08e-07,122;UBERON:0001948,2.74e-07,5;UBERON:0002315,2.74e-07,5;UBERON:0002950,7.16e-07,4;UBERON:0001891,7.16e-07,4;UBERON:0009616,7.16e-07,4;UBERON:0010286,7.16e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,1.26766280701236,0,0,0,0,0,7.19040265244171,21.1320067926855,0.207379224616955,0.945041568321835,0.630974884054146,4.28476476605705,5.07997644188711,0.857435594504678,0.191690942036473,0,5.50579404996943,6.76742891851495,4.45458946443106,2.37395317914349,2.19570344645783,2.6045668527838,9.49222196604695,4.50210088025344,8.09830713217094,7.07108605136802,4.41352210477219,2.98239113320481,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,5.19547486726887,0.867426633830679,1.52232739156071,0.922461989024234,1.3565037649736,2.93971767839262,0.251333182659351,0,0.289198713839823,0,0,0,0,1.86391761218122,3.51336956413857,19.4785437336513,0.255457055208591,0,0,0,11.0845073159569,8.23501085073528,1.88481528169297,9.38651329038293,3.06858548796397,15.584103341967,2.27137768294861,0.305518091550949,0,0,0,0.260240885925407,0,0.360124259610698,0.150704817835715,0.612328492361951,0.512454881139399,0.468508622798644,0.776110112217047,0,0,0,0.43839146485515,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72927835405207,2.05809224758569,0,0,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0.251335208800269,1.39269530428806,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86697890940181,5.15731421005694,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0.477937595905104,0.445597348164788,0,0.404810701674894,1.46127928955656,1.58115111178609,7.39039027770156,0,1.24645922567079,0.162886959353576,0,1.32745138339963,0.242780636154981,0.302323556964751,0.943025398779491,0.885905678642318,0.307435147943927,0,1.45413491791002,1.06949213515416,0.316036757935816,0,0,13.2771446243977,0.36012218806262,1.03486947026204,0.428674070063185,1.24138163549592,0.535106452806212,1.31639216481697,10.3518082698964,0.469343416127421,0,0.220528398054962,0,0,0,0,0,0.291480836629851,10.3838169125885,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,1.12738587736838,0,0,0,0,0,0,0,2.20204623293993,0.966336483304024,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,1.55390167361845,0.986852422704233,0.839423081820392,0.19318959403219,0,0,0,0,2.82375921308533,4.14292712856459,4.01026859407578,2.57779773515531,2.05524755931193,6.0431511791176,5.40018000185445,4.95353323546643,2.26571204492102,3.62432218226274,0,2.39414924040619,1.02440163452481,0.486213434136588,0.419226325255965,0.735374033800057,0.222246727801615,0.618105171716683,0,0,0,0,0.0936415074698824,0.384150914429216,0.114870937911227,0.476293691283074,0.463537303779422,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0,0,0.135804113845862,0,0.355905054372522,0,0.409231043169689,0.154936841185966,0.385813221962283,1.99848462350357,0.233931608445408,1.28922632428979,2.86932498103265,1.54413993383661,0.231867835620421 | |||
|short_description=p@chrX:7499494..7499535,+ | |||
}} |
Latest revision as of 10:45, 6 August 2015
Short description: | p@chrX:7499494..7499535, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:7499494..7499535, + |
Coexpression cluster: | MCL_coexpression_mm9:980 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.50e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.50e-13 | 23 |
neuron | 3.85e-10 | 33 |
neuronal stem cell | 3.85e-10 | 33 |
neuroblast | 3.85e-10 | 33 |
electrically signaling cell | 3.85e-10 | 33 |
neural cell | 8.00e-09 | 43 |
ectodermal cell | 1.71e-08 | 44 |
neurectodermal cell | 1.71e-08 | 44 |
electrically responsive cell | 8.59e-08 | 39 |
electrically active cell | 8.59e-08 | 39 |