FFCP PHASE1:Hg19::chr3:147127142..147127168,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7545 | |EntrezGene=7545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |HGNC=12872 | ||
|TSSclassifier=strong | |||
|UniProt=Q15915 | |UniProt=Q15915 | ||
|association_with_transcript=-2bp_to_ENST00000282928_5end | |association_with_transcript=-2bp_to_ENST00000282928_5end | ||
|cluster_id=chr3:147127142..147127168,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_1_at_ZIC1_5end | |description=CAGE_peak_1_at_ZIC1_5end | ||
|id=chr3:147127142..147127168,+ | |id=chr3:147127142..147127168,+ | ||
|ontology_enrichment_celltype=CL:0002620!6.12e-12!23;CL:0002319!6.64e-11!25;CL:0000243!9.49e-10!15;CL:0000125!9.49e-10!15;CL:0000030!9.49e-10!15;CL:0000339!9.49e-10!15;CL:0000095!1.72e-09!17;CL:0000123!1.72e-09!17;CL:0000133!2.07e-08!59;CL:0000055!6.49e-08!180;CL:0000221!3.96e-07!71;CL:0000128!6.17e-07!7;CL:0000126!6.17e-07!7;CL:0000127!6.17e-07!7;CL:0002453!6.17e-07!7 | |ontology_enrichment_celltype=CL:0002620!6.12e-12!23;CL:0002319!6.64e-11!25;CL:0000243!9.49e-10!15;CL:0000125!9.49e-10!15;CL:0000030!9.49e-10!15;CL:0000339!9.49e-10!15;CL:0000095!1.72e-09!17;CL:0000123!1.72e-09!17;CL:0000133!2.07e-08!59;CL:0000055!6.49e-08!180;CL:0000221!3.96e-07!71;CL:0000128!6.17e-07!7;CL:0000126!6.17e-07!7;CL:0000127!6.17e-07!7;CL:0002453!6.17e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.23e-12;25!CL:0000243;8.89e-10;15!CL:0000125;8.89e-10;15!CL:0000095;1.00e-09;17!CL:0002620;1.04e-08;23!CL:0000128;1.89e-08;7!CL:0000126;1.89e-08;7!CL:0000127;1.89e-08;7!CL:0002559;1.81e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.59e-12,25;CL:0000133,1.49e-10,59;CL:0000243,7.02e-10,15;CL:0000125,7.02e-10,15;CL:0000030,7.02e-10,15;CL:0000339,7.02e-10,15;CL:0000095,8.00e-10,17;CL:0000123,8.00e-10,17;CL:0000221,1.94e-09,72;CL:0002620,1.18e-08,23;CL:0000128,1.59e-08,7;CL:0000126,1.59e-08,7;CL:0000127,1.59e-08,7;CL:0002453,1.59e-08,7;CL:0002559,1.83e-07,5;CL:0000333,2.21e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.46e-11;82!CL:0000339;8.89e-10;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.75e-57!82;UBERON:0000073!4.38e-56!94;UBERON:0001016!4.38e-56!94;UBERON:0005743!5.42e-56!86;UBERON:0000955!1.28e-50!69;UBERON:0006238!1.28e-50!69;UBERON:0002616!7.50e-45!59;UBERON:0001049!4.99e-43!57;UBERON:0005068!4.99e-43!57;UBERON:0006241!4.99e-43!57;UBERON:0007135!4.99e-43!57;UBERON:0004121!8.59e-39!169;UBERON:0000924!5.87e-38!173;UBERON:0006601!5.87e-38!173;UBERON:0003075!4.02e-37!86;UBERON:0007284!4.02e-37!86;UBERON:0002346!1.72e-35!90;UBERON:0000033!1.62e-34!123;UBERON:0000153!2.62e-33!129;UBERON:0007811!2.62e-33!129;UBERON:0002780!2.45e-29!41;UBERON:0001890!2.45e-29!41;UBERON:0006240!2.45e-29!41;UBERON:0003080!2.86e-28!42;UBERON:0003056!1.13e-26!61;UBERON:0002020!2.95e-24!34;UBERON:0003528!2.95e-24!34;UBERON:0001893!4.50e-24!34;UBERON:0002791!1.94e-23!33;UBERON:0001869!1.81e-22!32;UBERON:0000956!2.38e-17!25;UBERON:0000203!2.38e-17!25;UBERON:0000475!2.02e-16!365;UBERON:0003076!5.87e-16!15;UBERON:0003057!5.87e-16!15;UBERON:0002619!2.23e-15!22;UBERON:0002097!4.54e-14!40;UBERON:0004732!5.32e-14!13;UBERON:0001950!1.11e-13!20;UBERON:0004733!4.38e-13!12;UBERON:0002028!4.38e-13!12;UBERON:0007277!4.38e-13!12;UBERON:0002199!4.92e-13!45;UBERON:0002416!4.92e-13!45;UBERON:0007023!5.09e-13!115;UBERON:0000119!2.70e-11!312;UBERON:0002680!2.54e-10!9;UBERON:0001895!2.54e-10!9;UBERON:0010092!2.54e-10!9;UBERON:0000483!4.70e-10!309;UBERON:0002308!2.10e-08!9;UBERON:0000125!2.10e-08!9;UBERON:0002420!4.48e-08!9;UBERON:0007245!4.48e-08!9;UBERON:0010009!4.48e-08!9;UBERON:0010011!4.48e-08!9;UBERON:0000454!4.48e-08!9;UBERON:0002037!6.53e-08!6;UBERON:0006215!6.53e-08!6;UBERON:0002200!1.33e-07!11;UBERON:0006876!1.33e-07!11;UBERON:0002067!3.39e-07!9;UBERON:0004016!3.39e-07!9;UBERON:0010083!3.39e-07!9;UBERON:0000468!8.20e-07!659;UBERON:0009663!8.25e-07!7 | |ontology_enrichment_uberon=UBERON:0001017!6.75e-57!82;UBERON:0000073!4.38e-56!94;UBERON:0001016!4.38e-56!94;UBERON:0005743!5.42e-56!86;UBERON:0000955!1.28e-50!69;UBERON:0006238!1.28e-50!69;UBERON:0002616!7.50e-45!59;UBERON:0001049!4.99e-43!57;UBERON:0005068!4.99e-43!57;UBERON:0006241!4.99e-43!57;UBERON:0007135!4.99e-43!57;UBERON:0004121!8.59e-39!169;UBERON:0000924!5.87e-38!173;UBERON:0006601!5.87e-38!173;UBERON:0003075!4.02e-37!86;UBERON:0007284!4.02e-37!86;UBERON:0002346!1.72e-35!90;UBERON:0000033!1.62e-34!123;UBERON:0000153!2.62e-33!129;UBERON:0007811!2.62e-33!129;UBERON:0002780!2.45e-29!41;UBERON:0001890!2.45e-29!41;UBERON:0006240!2.45e-29!41;UBERON:0003080!2.86e-28!42;UBERON:0003056!1.13e-26!61;UBERON:0002020!2.95e-24!34;UBERON:0003528!2.95e-24!34;UBERON:0001893!4.50e-24!34;UBERON:0002791!1.94e-23!33;UBERON:0001869!1.81e-22!32;UBERON:0000956!2.38e-17!25;UBERON:0000203!2.38e-17!25;UBERON:0000475!2.02e-16!365;UBERON:0003076!5.87e-16!15;UBERON:0003057!5.87e-16!15;UBERON:0002619!2.23e-15!22;UBERON:0002097!4.54e-14!40;UBERON:0004732!5.32e-14!13;UBERON:0001950!1.11e-13!20;UBERON:0004733!4.38e-13!12;UBERON:0002028!4.38e-13!12;UBERON:0007277!4.38e-13!12;UBERON:0002199!4.92e-13!45;UBERON:0002416!4.92e-13!45;UBERON:0007023!5.09e-13!115;UBERON:0000119!2.70e-11!312;UBERON:0002680!2.54e-10!9;UBERON:0001895!2.54e-10!9;UBERON:0010092!2.54e-10!9;UBERON:0000483!4.70e-10!309;UBERON:0002308!2.10e-08!9;UBERON:0000125!2.10e-08!9;UBERON:0002420!4.48e-08!9;UBERON:0007245!4.48e-08!9;UBERON:0010009!4.48e-08!9;UBERON:0010011!4.48e-08!9;UBERON:0000454!4.48e-08!9;UBERON:0002037!6.53e-08!6;UBERON:0006215!6.53e-08!6;UBERON:0002200!1.33e-07!11;UBERON:0006876!1.33e-07!11;UBERON:0002067!3.39e-07!9;UBERON:0004016!3.39e-07!9;UBERON:0010083!3.39e-07!9;UBERON:0000468!8.20e-07!659;UBERON:0009663!8.25e-07!7 | ||
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| ||
|short_description=p1@ZIC1 | |short_description=p1@ZIC1 | ||
}} | }} |
Latest revision as of 18:46, 15 September 2015
Short description: | p1@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZIC1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -2bp_to_ENST00000282928_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | Q15915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.59e-12 | 25 |
neurectodermal cell | 1.49e-10 | 59 |
glial cell (sensu Vertebrata) | 7.02e-10 | 15 |
glial cell | 7.02e-10 | 15 |
glioblast | 7.02e-10 | 15 |
glioblast (sensu Vertebrata) | 7.02e-10 | 15 |
neuron associated cell | 8.00e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 8.00e-10 | 17 |
ectodermal cell | 1.94e-09 | 72 |
skin fibroblast | 1.18e-08 | 23 |
oligodendrocyte | 1.59e-08 | 7 |
macroglial cell | 1.59e-08 | 7 |
astrocyte | 1.59e-08 | 7 |
oligodendrocyte precursor cell | 1.59e-08 | 7 |
hair follicle cell | 1.83e-07 | 5 |
migratory neural crest cell | 2.21e-07 | 41 |