FFCP PHASE1:Hg19::chr5:146833803..146833825,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1809 | |EntrezGene=1809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |HGNC=3015 | ||
|TSSclassifier=strong | |||
|UniProt=D6RF19 | |UniProt=D6RF19 | ||
|association_with_transcript=3bp_to_ENST00000512722_5end | |association_with_transcript=3bp_to_ENST00000512722_5end | ||
|cluster_id=chr5:146833803..146833825,- | |||
|coexpression_cluster_id=C1954 | |coexpression_cluster_id=C1954 | ||
|description=CAGE_peak_14_at_DPYSL3_5end | |description=CAGE_peak_14_at_DPYSL3_5end | ||
|id=chr5:146833803..146833825,- | |id=chr5:146833803..146833825,- | ||
|ontology_enrichment_celltype=CL:0002319!1.83e-10!25;CL:0000133!7.75e-10!59;CL:0000055!1.52e-08!180;CL:0000047!1.12e-07!8 | |ontology_enrichment_celltype=CL:0002319!1.83e-10!25;CL:0000133!7.75e-10!59;CL:0000055!1.52e-08!180;CL:0000047!1.12e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.51e-10;25!CL:0000540;4.32e-10;6!CL:0000404;4.32e-10;6!CL:0002322;2.61e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.26e-12,8;CL:0002319,2.04e-10,25;CL:0000540,4.32e-10,6;CL:0000031,4.32e-10,6;CL:0000404,4.32e-10,6;CL:0000133,2.67e-09,59;CL:0002322,2.68e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000031;4.32e-10;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.41e-21!94;UBERON:0001016!1.41e-21!94;UBERON:0001017!3.93e-21!82;UBERON:0005743!4.42e-21!86;UBERON:0004121!2.42e-17!169;UBERON:0000924!2.28e-16!173;UBERON:0006601!2.28e-16!173;UBERON:0003075!1.61e-15!86;UBERON:0007284!1.61e-15!86;UBERON:0002346!4.02e-14!90;UBERON:0000955!1.69e-13!69;UBERON:0006238!1.69e-13!69;UBERON:0001049!3.29e-13!57;UBERON:0005068!3.29e-13!57;UBERON:0006241!3.29e-13!57;UBERON:0007135!3.29e-13!57;UBERON:0000468!9.19e-13!659;UBERON:0000922!1.47e-11!612;UBERON:0000025!5.17e-11!194;UBERON:0002616!5.34e-11!59;UBERON:0007023!2.59e-10!115;UBERON:0000033!1.00e-09!123;UBERON:0000480!3.21e-09!626;UBERON:0000153!4.44e-09!129;UBERON:0007811!4.44e-09!129;UBERON:0000467!4.96e-09!625;UBERON:0002050!5.48e-09!605;UBERON:0005423!5.48e-09!605;UBERON:0000923!1.12e-08!604;UBERON:0005291!1.12e-08!604;UBERON:0006598!1.12e-08!604;UBERON:0002532!1.12e-08!604;UBERON:0004111!1.57e-08!241;UBERON:0003080!5.60e-08!42;UBERON:0000477!7.51e-08!286;UBERON:0003056!7.90e-08!61;UBERON:0002780!9.53e-08!41;UBERON:0001890!9.53e-08!41;UBERON:0006240!9.53e-08!41;UBERON:0002020!1.61e-07!34;UBERON:0003528!1.61e-07!34;UBERON:0000062!2.30e-07!511;UBERON:0000483!2.75e-07!309;UBERON:0000119!2.80e-07!312;UBERON:0001893!3.64e-07!34;UBERON:0003076!3.85e-07!15;UBERON:0003057!3.85e-07!15;UBERON:0002791!6.36e-07!33 | |ontology_enrichment_uberon=UBERON:0000073!1.41e-21!94;UBERON:0001016!1.41e-21!94;UBERON:0001017!3.93e-21!82;UBERON:0005743!4.42e-21!86;UBERON:0004121!2.42e-17!169;UBERON:0000924!2.28e-16!173;UBERON:0006601!2.28e-16!173;UBERON:0003075!1.61e-15!86;UBERON:0007284!1.61e-15!86;UBERON:0002346!4.02e-14!90;UBERON:0000955!1.69e-13!69;UBERON:0006238!1.69e-13!69;UBERON:0001049!3.29e-13!57;UBERON:0005068!3.29e-13!57;UBERON:0006241!3.29e-13!57;UBERON:0007135!3.29e-13!57;UBERON:0000468!9.19e-13!659;UBERON:0000922!1.47e-11!612;UBERON:0000025!5.17e-11!194;UBERON:0002616!5.34e-11!59;UBERON:0007023!2.59e-10!115;UBERON:0000033!1.00e-09!123;UBERON:0000480!3.21e-09!626;UBERON:0000153!4.44e-09!129;UBERON:0007811!4.44e-09!129;UBERON:0000467!4.96e-09!625;UBERON:0002050!5.48e-09!605;UBERON:0005423!5.48e-09!605;UBERON:0000923!1.12e-08!604;UBERON:0005291!1.12e-08!604;UBERON:0006598!1.12e-08!604;UBERON:0002532!1.12e-08!604;UBERON:0004111!1.57e-08!241;UBERON:0003080!5.60e-08!42;UBERON:0000477!7.51e-08!286;UBERON:0003056!7.90e-08!61;UBERON:0002780!9.53e-08!41;UBERON:0001890!9.53e-08!41;UBERON:0006240!9.53e-08!41;UBERON:0002020!1.61e-07!34;UBERON:0003528!1.61e-07!34;UBERON:0000062!2.30e-07!511;UBERON:0000483!2.75e-07!309;UBERON:0000119!2.80e-07!312;UBERON:0001893!3.64e-07!34;UBERON:0003076!3.85e-07!15;UBERON:0003057!3.85e-07!15;UBERON:0002791!6.36e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.35e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.17e-16,81;UBERON:0001016,5.29e-15,89;UBERON:0004121,3.44e-12,171;UBERON:0000924,3.44e-12,171;UBERON:0006601,3.44e-12,171;UBERON:0010314,3.65e-12,132;UBERON:0003075,9.21e-11,82;UBERON:0007284,9.21e-11,82;UBERON:0002346,8.29e-10,86;UBERON:0001049,5.72e-09,56;UBERON:0005068,5.72e-09,56;UBERON:0006241,5.72e-09,56;UBERON:0007135,5.72e-09,56;UBERON:0000922,2.95e-08,592;UBERON:0000025,1.03e-07,192;UBERON:0010371,1.14e-07,104;UBERON:0002298,1.90e-07,6;UBERON:0003076,3.39e-07,15;UBERON:0003057,3.39e-07,15;UBERON:0000073,4.40e-07,53;UBERON:0002616,4.40e-07,53;UBERON:0000955,6.08e-07,68;UBERON:0006238,6.08e-07,68;UBERON:0002050,6.58e-07,564;UBERON:0000923,9.25e-07,560;UBERON:0010316,9.25e-07,560;UBERON:0005291,9.25e-07,560;UBERON:0006598,9.25e-07,560;UBERON:0010317,9.25e-07,560;UBERON:0002532,9.25e-07,560 | |||
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| ||
|short_description=p14@DPYSL3 | |short_description=p14@DPYSL3 | ||
}} | }} |
Latest revision as of 22:10, 15 September 2015
Short description: | p14@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_DPYSL3_5end |
Coexpression cluster: | C1954_occipital_parietal_temporal_duodenum_brain_Neurons_medulloblastoma |
Association with transcript: | 3bp_to_ENST00000512722_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | D6RF19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.26e-12 | 8 |
neural cell | 2.04e-10 | 25 |
neuron | 4.32e-10 | 6 |
neuroblast | 4.32e-10 | 6 |
electrically signaling cell | 4.32e-10 | 6 |
neurectodermal cell | 2.67e-09 | 59 |
embryonic stem cell | 2.68e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.17e-16 | 81 |
nervous system | 5.29e-15 | 89 |
ectoderm-derived structure | 3.44e-12 | 171 |
ectoderm | 3.44e-12 | 171 |
presumptive ectoderm | 3.44e-12 | 171 |
structure with developmental contribution from neural crest | 3.65e-12 | 132 |
neural plate | 9.21e-11 | 82 |
presumptive neural plate | 9.21e-11 | 82 |
neurectoderm | 8.29e-10 | 86 |
neural tube | 5.72e-09 | 56 |
neural rod | 5.72e-09 | 56 |
future spinal cord | 5.72e-09 | 56 |
neural keel | 5.72e-09 | 56 |
embryo | 2.95e-08 | 592 |
tube | 1.03e-07 | 192 |
ecto-epithelium | 1.14e-07 | 104 |
brainstem | 1.90e-07 | 6 |
posterior neural tube | 3.39e-07 | 15 |
chordal neural plate | 3.39e-07 | 15 |
regional part of nervous system | 4.40e-07 | 53 |
regional part of brain | 4.40e-07 | 53 |
brain | 6.08e-07 | 68 |
future brain | 6.08e-07 | 68 |
embryonic structure | 6.58e-07 | 564 |
germ layer | 9.25e-07 | 560 |
germ layer / neural crest | 9.25e-07 | 560 |
embryonic tissue | 9.25e-07 | 560 |
presumptive structure | 9.25e-07 | 560 |
germ layer / neural crest derived structure | 9.25e-07 | 560 |
epiblast (generic) | 9.25e-07 | 560 |