FFCP PHASE1:Hg19::chr19:13616887..13616912,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=773 | |EntrezGene=773 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1388 | |HGNC=1388 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS88,B5TYJ1 | |UniProt=Q9NS88,B5TYJ1 | ||
|association_with_transcript=125bp_to_AB035727,FJ040507_5end | |association_with_transcript=125bp_to_AB035727,FJ040507_5end | ||
|cluster_id=chr19:13616887..13616912,- | |||
|coexpression_cluster_id=C118 | |coexpression_cluster_id=C118 | ||
|description=CAGE_peak_10_at_CACNA1A_5end | |description=CAGE_peak_10_at_CACNA1A_5end | ||
|id=chr19:13616887..13616912,- | |id=chr19:13616887..13616912,- | ||
|ontology_enrichment_celltype=CL:0002322!6.20e-11!5 | |ontology_enrichment_celltype=CL:0002322!6.20e-11!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.06e-34;3!UBERON:0006601;8.51e-13;82!UBERON:0010122;8.28e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.85e-65!57;UBERON:0005068!4.85e-65!57;UBERON:0006241!4.85e-65!57;UBERON:0007135!4.85e-65!57;UBERON:0001017!7.90e-59!82;UBERON:0005743!6.24e-58!86;UBERON:0002616!4.44e-56!59;UBERON:0001893!4.98e-56!34;UBERON:0001869!5.43e-56!32;UBERON:0002020!6.14e-56!34;UBERON:0003528!6.14e-56!34;UBERON:0000955!4.42e-54!69;UBERON:0006238!4.42e-54!69;UBERON:0002791!9.99e-54!33;UBERON:0002780!6.41e-52!41;UBERON:0001890!6.41e-52!41;UBERON:0006240!6.41e-52!41;UBERON:0000073!2.91e-51!94;UBERON:0001016!2.91e-51!94;UBERON:0003080!1.72e-50!42;UBERON:0001950!5.54e-47!20;UBERON:0002619!1.69e-46!22;UBERON:0003075!9.16e-46!86;UBERON:0007284!9.16e-46!86;UBERON:0002346!2.09e-45!90;UBERON:0000956!2.19e-40!25;UBERON:0000203!2.19e-40!25;UBERON:0003056!2.88e-34!61;UBERON:0007023!2.69e-33!115;UBERON:0000033!1.87e-28!123;UBERON:0000153!1.39e-26!129;UBERON:0007811!1.39e-26!129;UBERON:0000924!2.48e-23!173;UBERON:0006601!2.48e-23!173;UBERON:0004121!5.70e-23!169;UBERON:0002420!3.65e-17!9;UBERON:0007245!3.65e-17!9;UBERON:0010009!3.65e-17!9;UBERON:0010011!3.65e-17!9;UBERON:0000454!3.65e-17!9;UBERON:0002308!1.03e-16!9;UBERON:0000125!1.03e-16!9;UBERON:0000200!3.66e-16!6;UBERON:0001871!7.21e-16!7;UBERON:0003076!4.22e-15!15;UBERON:0003057!4.22e-15!15;UBERON:0000025!1.23e-14!194;UBERON:0002021!9.67e-14!5;UBERON:0001872!1.88e-13!5;UBERON:0009663!1.07e-12!7;UBERON:0004733!1.52e-12!12;UBERON:0002028!1.52e-12!12;UBERON:0007277!1.52e-12!12;UBERON:0004732!1.85e-11!13;UBERON:0000369!8.31e-11!4;UBERON:0002435!8.31e-11!4;UBERON:0000204!8.31e-11!4;UBERON:0010082!8.31e-11!4;UBERON:0002680!4.23e-10!9;UBERON:0001895!4.23e-10!9;UBERON:0010092!4.23e-10!9;UBERON:0004111!1.37e-09!241;UBERON:0000064!1.88e-09!219;UBERON:0000475!2.73e-09!365;UBERON:0002771!4.59e-09!3;UBERON:0005383!1.89e-08!3;UBERON:0005382!1.89e-08!3;UBERON:0000349!2.24e-08!5;UBERON:0000483!3.57e-08!309;UBERON:0000119!5.55e-08!312;UBERON:0000988!5.89e-08!3;UBERON:0000477!1.55e-07!286;UBERON:0002298!2.28e-07!8 | |ontology_enrichment_uberon=UBERON:0001049!4.85e-65!57;UBERON:0005068!4.85e-65!57;UBERON:0006241!4.85e-65!57;UBERON:0007135!4.85e-65!57;UBERON:0001017!7.90e-59!82;UBERON:0005743!6.24e-58!86;UBERON:0002616!4.44e-56!59;UBERON:0001893!4.98e-56!34;UBERON:0001869!5.43e-56!32;UBERON:0002020!6.14e-56!34;UBERON:0003528!6.14e-56!34;UBERON:0000955!4.42e-54!69;UBERON:0006238!4.42e-54!69;UBERON:0002791!9.99e-54!33;UBERON:0002780!6.41e-52!41;UBERON:0001890!6.41e-52!41;UBERON:0006240!6.41e-52!41;UBERON:0000073!2.91e-51!94;UBERON:0001016!2.91e-51!94;UBERON:0003080!1.72e-50!42;UBERON:0001950!5.54e-47!20;UBERON:0002619!1.69e-46!22;UBERON:0003075!9.16e-46!86;UBERON:0007284!9.16e-46!86;UBERON:0002346!2.09e-45!90;UBERON:0000956!2.19e-40!25;UBERON:0000203!2.19e-40!25;UBERON:0003056!2.88e-34!61;UBERON:0007023!2.69e-33!115;UBERON:0000033!1.87e-28!123;UBERON:0000153!1.39e-26!129;UBERON:0007811!1.39e-26!129;UBERON:0000924!2.48e-23!173;UBERON:0006601!2.48e-23!173;UBERON:0004121!5.70e-23!169;UBERON:0002420!3.65e-17!9;UBERON:0007245!3.65e-17!9;UBERON:0010009!3.65e-17!9;UBERON:0010011!3.65e-17!9;UBERON:0000454!3.65e-17!9;UBERON:0002308!1.03e-16!9;UBERON:0000125!1.03e-16!9;UBERON:0000200!3.66e-16!6;UBERON:0001871!7.21e-16!7;UBERON:0003076!4.22e-15!15;UBERON:0003057!4.22e-15!15;UBERON:0000025!1.23e-14!194;UBERON:0002021!9.67e-14!5;UBERON:0001872!1.88e-13!5;UBERON:0009663!1.07e-12!7;UBERON:0004733!1.52e-12!12;UBERON:0002028!1.52e-12!12;UBERON:0007277!1.52e-12!12;UBERON:0004732!1.85e-11!13;UBERON:0000369!8.31e-11!4;UBERON:0002435!8.31e-11!4;UBERON:0000204!8.31e-11!4;UBERON:0010082!8.31e-11!4;UBERON:0002680!4.23e-10!9;UBERON:0001895!4.23e-10!9;UBERON:0010092!4.23e-10!9;UBERON:0004111!1.37e-09!241;UBERON:0000064!1.88e-09!219;UBERON:0000475!2.73e-09!365;UBERON:0002771!4.59e-09!3;UBERON:0005383!1.89e-08!3;UBERON:0005382!1.89e-08!3;UBERON:0000349!2.24e-08!5;UBERON:0000483!3.57e-08!309;UBERON:0000119!5.55e-08!312;UBERON:0000988!5.89e-08!3;UBERON:0000477!1.55e-07!286;UBERON:0002298!2.28e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.79e-62;20!UBERON:0002619;2.38e-56;22!UBERON:0000956;1.06e-49;25!UBERON:0000203;1.06e-49;25!UBERON:0001893;9.63e-41;34!UBERON:0001869;6.19e-40;32!UBERON:0002791;1.93e-38;32!UBERON:0003528;9.32e-38;34!UBERON:0002020;9.32e-38;34!UBERON:0000200;1.67e-29;6!UBERON:0000955;9.82e-27;68!UBERON:0001871;2.39e-25;6!UBERON:0000073;8.79e-24;53!UBERON:0002616;8.79e-24;53!UBERON:0002771;6.10e-23;2!UBERON:0002780;1.31e-21;41!UBERON:0001890;1.31e-21;41!UBERON:0001017;8.78e-21;75!UBERON:0002021;1.24e-20;5!UBERON:0002037;1.47e-17;6!UBERON:0001016;2.08e-14;83!UBERON:0002022;8.83e-13;1!UBERON:0002581;2.32e-12;1!UBERON:0002902;2.32e-12;1!UBERON:0009899;2.32e-12;1!UBERON:0002680;6.64e-12;9!UBERON:0001895;6.64e-12;9!UBERON:0001872;9.27e-10;5!UBERON:0004733;4.63e-09;12!UBERON:0002028;4.63e-09;12!UBERON:0004732;2.11e-08;13!UBERON:0001876;8.28e-07;2!UBERON:0001873;8.28e-07;2!UBERON:0002702;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.73e-61,20;UBERON:0002619,4.93e-56,22;UBERON:0000956,2.01e-49,25;UBERON:0000203,2.01e-49,25;UBERON:0002791,4.21e-46,32;UBERON:0001869,4.21e-46,32;UBERON:0000073,7.59e-44,53;UBERON:0002616,7.59e-44,53;UBERON:0000955,2.03e-43,68;UBERON:0006238,2.03e-43,68;UBERON:0003528,2.20e-43,34;UBERON:0002020,2.20e-43,34;UBERON:0001893,2.20e-43,34;UBERON:0001049,1.92e-41,56;UBERON:0005068,1.92e-41,56;UBERON:0006241,1.92e-41,56;UBERON:0007135,1.92e-41,56;UBERON:0001017,2.60e-36,81;UBERON:0002780,6.61e-36,41;UBERON:0001890,6.61e-36,41;UBERON:0003080,6.61e-36,41;UBERON:0006240,6.61e-36,41;UBERON:0001016,1.45e-32,89;UBERON:0000200,3.02e-29,6;UBERON:0003075,7.18e-28,82;UBERON:0007284,7.18e-28,82;UBERON:0002346,1.69e-26,86;UBERON:0001871,2.26e-25,6;UBERON:0003056,7.97e-24,61;UBERON:0002771,6.12e-23,2;UBERON:0010371,1.28e-21,104;UBERON:0002021,1.17e-20,5;UBERON:0007023,8.08e-20,114;UBERON:0002037,1.52e-17,6;UBERON:0006215,1.52e-17,6;UBERON:0010314,1.21e-16,132;UBERON:0004121,3.18e-16,171;UBERON:0000924,3.18e-16,171;UBERON:0006601,3.18e-16,171;UBERON:0002022,9.92e-13,1;UBERON:0002902,1.96e-12,1;UBERON:0009899,1.96e-12,1;UBERON:0002581,3.08e-12,1;UBERON:0011216,6.52e-12,223;UBERON:0002680,6.77e-12,9;UBERON:0001895,6.77e-12,9;UBERON:0010092,6.77e-12,9;UBERON:0000025,8.17e-11,192;UBERON:0001872,1.38e-09,5;UBERON:0004733,4.70e-09,12;UBERON:0002028,4.70e-09,12;UBERON:0007277,4.70e-09,12;UBERON:0004732,2.14e-08,13;UBERON:0004111,3.18e-08,240;UBERON:0003076,2.43e-07,15;UBERON:0003057,2.43e-07,15;UBERON:0001876,6.07e-07,2;UBERON:0001873,8.06e-07,2;UBERON:0010122,8.06e-07,2 | |||
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|short_description=p10@CACNA1A | |short_description=p10@CACNA1A | ||
}} | }} |
Latest revision as of 01:09, 16 September 2015
Short description: | p10@CACNA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CACNA1A_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 125bp_to_AB035727, FJ040507_5end |
EntrezGene: | CACNA1A |
HGNC: | 1388 |
UniProt: | Q9NS88B5TYJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data