FFCP PHASE1:Hg19::chr12:95044247..95044267,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:95044247..95044267,-
|short_description=p5@TMCC3
|description=CAGE_peak_5_at_TMCC3_5end
|association_with_transcript=56bp_to_NM_020698,uc001tdj.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57458 | |EntrezGene=57458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29199 | |HGNC=29199 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULS5 | |UniProt=Q9ULS5 | ||
|association_with_transcript=56bp_to_NM_020698,uc001tdj.2_5end | |||
|cluster_id=chr12:95044247..95044267,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_TMCC3_5end | |||
|id=chr12:95044247..95044267,- | |||
|ontology_enrichment_celltype=CL:0002057!1.25e-10!42;CL:0000860!3.87e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000094;3.85e-10;8!CL:0000775;4.90e-08;3!CL:0000081;4.20e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.29e-10,8;CL:0000775,4.99e-08,3;CL:0000081,3.76e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.84e-07;3!UBERON:0003057;9.84e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.16e-25!115;UBERON:0001049!5.35e-19!57;UBERON:0005068!5.35e-19!57;UBERON:0006241!5.35e-19!57;UBERON:0007135!5.35e-19!57;UBERON:0003080!2.28e-15!42;UBERON:0002780!9.23e-15!41;UBERON:0001890!9.23e-15!41;UBERON:0006240!9.23e-15!41;UBERON:0002020!2.40e-14!34;UBERON:0003528!2.40e-14!34;UBERON:0001893!2.47e-14!34;UBERON:0002616!3.96e-14!59;UBERON:0002791!9.62e-14!33;UBERON:0001869!7.32e-13!32;UBERON:0003075!1.10e-12!86;UBERON:0007284!1.10e-12!86;UBERON:0001017!1.89e-12!82;UBERON:0000955!2.06e-12!69;UBERON:0006238!2.06e-12!69;UBERON:0002050!3.48e-12!605;UBERON:0005423!3.48e-12!605;UBERON:0000922!5.35e-12!612;UBERON:0000467!7.17e-12!625;UBERON:0000073!7.23e-12!94;UBERON:0001016!7.23e-12!94;UBERON:0000923!7.38e-12!604;UBERON:0005291!7.38e-12!604;UBERON:0006598!7.38e-12!604;UBERON:0002532!7.38e-12!604;UBERON:0005743!9.57e-12!86;UBERON:0000480!1.00e-11!626;UBERON:0002346!2.98e-11!90;UBERON:0002619!3.69e-11!22;UBERON:0003056!3.78e-11!61;UBERON:0000153!1.18e-10!129;UBERON:0007811!1.18e-10!129;UBERON:0000033!1.33e-10!123;UBERON:0000468!3.02e-10!659;UBERON:0001950!9.04e-10!20;UBERON:0000956!6.69e-09!25;UBERON:0000203!6.69e-09!25;UBERON:0004121!6.70e-09!169;UBERON:0000062!2.28e-08!511;UBERON:0000924!3.82e-08!173;UBERON:0006601!3.82e-08!173;UBERON:0002308!1.89e-07!9;UBERON:0000125!1.89e-07!9;UBERON:0002298!3.17e-07!8;UBERON:0002420!4.59e-07!9;UBERON:0007245!4.59e-07!9;UBERON:0010009!4.59e-07!9;UBERON:0010011!4.59e-07!9;UBERON:0000454!4.59e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.27e-13;34!UBERON:0002780;5.65e-13;41!UBERON:0001890;5.65e-13;41!UBERON:0003528;1.29e-12;34!UBERON:0002020;1.29e-12;34!UBERON:0002791;1.44e-12;32!UBERON:0000073;6.91e-12;53!UBERON:0002616;6.91e-12;53!UBERON:0001869;9.01e-12;32!UBERON:0002298;2.82e-11;6!UBERON:0000125;9.68e-11;9!UBERON:0002308;9.68e-11;9!UBERON:0002619;2.08e-09;22!UBERON:0000956;5.12e-08;25!UBERON:0000203;5.12e-08;25!UBERON:0002420;6.76e-08;9!UBERON:0007245;6.76e-08;9!UBERON:0010009;6.76e-08;9!UBERON:0010011;6.76e-08;9!UBERON:0000454;6.76e-08;9!UBERON:0001017;8.63e-08;75!UBERON:0009663;1.58e-07;7!UBERON:0001950;4.66e-07;20!UBERON:0001016;8.22e-07;83!UBERON:0002240;9.84e-07;3!UBERON:0005174;9.84e-07;3!UBERON:0001137;9.84e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.84e-25,56;UBERON:0005068,1.84e-25,56;UBERON:0006241,1.84e-25,56;UBERON:0007135,1.84e-25,56;UBERON:0000073,1.64e-21,53;UBERON:0002616,1.64e-21,53;UBERON:0000955,1.37e-17,68;UBERON:0006238,1.37e-17,68;UBERON:0007023,2.34e-17,114;UBERON:0001017,2.73e-17,81;UBERON:0002780,2.84e-17,41;UBERON:0001890,2.84e-17,41;UBERON:0003080,2.84e-17,41;UBERON:0006240,2.84e-17,41;UBERON:0001016,4.04e-17,89;UBERON:0003075,4.46e-16,82;UBERON:0007284,4.46e-16,82;UBERON:0003528,2.70e-15,34;UBERON:0002020,2.70e-15,34;UBERON:0001893,2.83e-15,34;UBERON:0002346,6.27e-15,86;UBERON:0010371,7.20e-15,104;UBERON:0002791,9.49e-13,32;UBERON:0001869,1.52e-12,32;UBERON:0002298,6.44e-12,6;UBERON:0010314,2.63e-11,132;UBERON:0003056,4.67e-11,61;UBERON:0000125,8.99e-11,9;UBERON:0002308,8.99e-11,9;UBERON:0003076,1.64e-09,15;UBERON:0003057,1.64e-09,15;UBERON:0002619,3.68e-09,22;UBERON:0004121,2.27e-08,171;UBERON:0000924,2.27e-08,171;UBERON:0006601,2.27e-08,171;UBERON:0000956,8.35e-08,25;UBERON:0000203,8.35e-08,25;UBERON:0002420,1.06e-07,9;UBERON:0007245,1.06e-07,9;UBERON:0010009,1.06e-07,9;UBERON:0010011,1.06e-07,9;UBERON:0000454,1.06e-07,9;UBERON:0009663,1.83e-07,7;UBERON:0004732,5.41e-07,13;UBERON:0002240,6.73e-07,3;UBERON:0005174,6.73e-07,3;UBERON:0001137,6.73e-07,3;UBERON:0001896,7.76e-07,3;UBERON:0005290,7.76e-07,3;UBERON:0010096,7.76e-07,3;UBERON:0001950,8.23e-07,20 | |||
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| ||
|short_description=p5@TMCC3 | |||
}} | }} |
Latest revision as of 01:48, 16 September 2015
Short description: | p5@TMCC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMCC3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 56bp_to_NM_020698, uc001tdj.2_5end |
EntrezGene: | TMCC3 |
HGNC: | 29199 |
UniProt: | Q9ULS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.29e-10 | 8 |
neutrophil | 4.99e-08 | 3 |
blood cell | 3.76e-07 | 11 |