FFCP PHASE1:Hg19::chr14:93389002..93389019,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1113 | |EntrezGene=1113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1929 | |HGNC=1929 | ||
|TSSclassifier=strong | |||
|UniProt=P10645 | |UniProt=P10645 | ||
|association_with_transcript=-405bp_to_ENST00000216492_5end | |association_with_transcript=-405bp_to_ENST00000216492_5end | ||
|cluster_id=chr14:93389002..93389019,+ | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_2_at_CHGA_5end | |description=CAGE_peak_2_at_CHGA_5end | ||
|id=chr14:93389002..93389019,+ | |id=chr14:93389002..93389019,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;7.75e-08;1!CL:0000167;1.72e-07;1!CL:0000164;1.72e-07;1!CL:0000502;1.72e-07;1!CL:0000172;1.72e-07;1!CL:0000173;1.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,8.00e-08,1;CL:0000167,1.95e-07,1;CL:0000164,1.95e-07,1;CL:0000502,1.95e-07,1;CL:0000172,1.95e-07,1;CL:0000173,1.95e-07,1;CL:0002351,1.95e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.72e-07;1 | |||
|ontology_enrichment_disease=DOID:169!2.18e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3030;7.75e-08;1!DOID:4430;1.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,8.00e-08,1;DOID:4430,1.95e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.37e-39!115;UBERON:0001893!4.66e-35!34;UBERON:0002780!2.27e-34!41;UBERON:0001890!2.27e-34!41;UBERON:0006240!2.27e-34!41;UBERON:0001869!3.17e-34!32;UBERON:0002619!9.19e-34!22;UBERON:0003080!2.06e-33!42;UBERON:0001950!4.04e-33!20;UBERON:0002791!9.93e-33!33;UBERON:0001049!3.96e-32!57;UBERON:0005068!3.96e-32!57;UBERON:0006241!3.96e-32!57;UBERON:0007135!3.96e-32!57;UBERON:0002020!1.02e-31!34;UBERON:0003528!1.02e-31!34;UBERON:0002616!8.54e-31!59;UBERON:0000956!2.54e-29!25;UBERON:0000203!2.54e-29!25;UBERON:0000955!3.73e-29!69;UBERON:0006238!3.73e-29!69;UBERON:0000073!1.83e-25!94;UBERON:0001016!1.83e-25!94;UBERON:0001017!3.33e-25!82;UBERON:0005743!1.13e-23!86;UBERON:0003075!3.80e-22!86;UBERON:0007284!3.80e-22!86;UBERON:0003056!4.15e-21!61;UBERON:0002346!8.15e-21!90;UBERON:0000200!5.99e-18!6;UBERON:0000153!1.75e-15!129;UBERON:0007811!1.75e-15!129;UBERON:0000033!2.93e-14!123;UBERON:0001871!4.64e-13!7;UBERON:0004121!2.40e-12!169;UBERON:0000924!7.32e-12!173;UBERON:0006601!7.32e-12!173;UBERON:0002021!5.04e-10!5;UBERON:0002771!1.20e-09!3;UBERON:0000064!3.67e-09!219;UBERON:0000025!4.49e-09!194;UBERON:0000007!2.09e-07!2;UBERON:0000481!2.51e-07!347;UBERON:0001870!3.82e-07!2;UBERON:0000062!6.49e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.22e-46;20!UBERON:0002619;1.16e-41;22!UBERON:0000956;1.46e-36;25!UBERON:0000203;1.46e-36;25!UBERON:0001869;4.23e-29;32!UBERON:0001893;3.22e-27;34!UBERON:0002791;2.23e-25;32!UBERON:0000200;3.05e-25;6!UBERON:0002780;2.21e-24;41!UBERON:0001890;2.21e-24;41!UBERON:0003528;6.36e-23;34!UBERON:0002020;6.36e-23;34!UBERON:0002021;2.42e-19;5!UBERON:0001870;1.63e-18;3!UBERON:0000007;1.25e-13;2!UBERON:0002702;5.04e-13;2!UBERON:0000073;1.02e-12;53!UBERON:0002616;1.02e-12;53!UBERON:0002108;1.14e-11;4!UBERON:0001872;1.37e-11;5!UBERON:0000955;3.58e-09;68!UBERON:0001871;1.67e-08;6!UBERON:0001017;2.87e-08;75!UBERON:0002902;1.29e-07;1!UBERON:0009899;1.29e-07;1!UBERON:0002581;1.72e-07;1!UBERON:0007190;1.72e-07;1!UBERON:0003296;3.11e-07;4!UBERON:0010133;3.11e-07;4!UBERON:0003112;3.30e-07;1!UBERON:0011158;3.30e-07;1!UBERON:0003128;3.30e-07;1!UBERON:0001703;3.30e-07;1!UBERON:0002241;3.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.43e-46,20;UBERON:0002619,5.90e-42,22;UBERON:0000956,8.01e-37,25;UBERON:0000203,8.01e-37,25;UBERON:0002780,9.12e-34,41;UBERON:0001890,9.12e-34,41;UBERON:0003080,9.12e-34,41;UBERON:0006240,9.12e-34,41;UBERON:0001869,3.71e-33,32;UBERON:0001893,4.21e-31,34;UBERON:0002791,1.80e-28,32;UBERON:0003528,1.07e-26,34;UBERON:0002020,1.07e-26,34;UBERON:0000073,1.58e-25,53;UBERON:0002616,1.58e-25,53;UBERON:0000200,2.09e-25,6;UBERON:0001049,5.19e-24,56;UBERON:0005068,5.19e-24,56;UBERON:0006241,5.19e-24,56;UBERON:0007135,5.19e-24,56;UBERON:0003056,8.29e-22,61;UBERON:0000955,1.38e-21,68;UBERON:0006238,1.38e-21,68;UBERON:0002021,2.20e-19,5;UBERON:0001870,6.94e-19,3;UBERON:0001017,1.18e-17,81;UBERON:0001016,1.40e-15,89;UBERON:0003075,1.87e-15,82;UBERON:0007284,1.87e-15,82;UBERON:0007023,3.66e-15,114;UBERON:0002346,1.36e-14,86;UBERON:0000007,1.33e-13,2;UBERON:0002702,2.99e-13,2;UBERON:0010371,3.76e-13,104;UBERON:0011216,8.51e-12,223;UBERON:0001872,1.20e-11,5;UBERON:0002108,1.34e-11,4;UBERON:0010314,5.12e-11,132;UBERON:0001871,1.65e-08,6;UBERON:0002902,1.25e-07,1;UBERON:0009899,1.25e-07,1;UBERON:0004121,1.41e-07,171;UBERON:0000924,1.41e-07,171;UBERON:0006601,1.41e-07,171;UBERON:0002581,1.42e-07,1;UBERON:0007190,2.07e-07,1;UBERON:0003112,2.83e-07,1;UBERON:0011158,2.83e-07,1;UBERON:0003128,2.83e-07,1;UBERON:0001703,2.83e-07,1;UBERON:0002241,2.83e-07,1;UBERON:0004761,2.83e-07,1;UBERON:0009617,2.83e-07,1;UBERON:0003296,3.21e-07,4;UBERON:0010133,3.21e-07,4 | |||
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| ||
|short_description=p2@CHGA | |short_description=p2@CHGA | ||
}} | }} |
Latest revision as of 15:36, 16 September 2015
Short description: | p2@CHGA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHGA_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -405bp_to_ENST00000216492_5end |
EntrezGene: | CHGA |
HGNC: | 1929 |
UniProt: | P10645 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 8.00e-08 | 1 |
peptide hormone secreting cell | 1.95e-07 | 1 |
enteroendocrine cell | 1.95e-07 | 1 |
type D enteroendocrine cell | 1.95e-07 | 1 |
somatostatin secreting cell | 1.95e-07 | 1 |
pancreatic D cell | 1.95e-07 | 1 |
progenitor cell of endocrine pancreas | 1.95e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 8.00e-08 | 1 |
somatostatinoma | 1.95e-07 | 1 |