FFCP PHASE1:Hg19::chr16:58283814..58283918,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29070 | |EntrezGene=29070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25002 | |HGNC=25002 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0I3,B4DR20 | |UniProt=Q9H0I3,B4DR20 | ||
|association_with_transcript=0bp_to_ENST00000219299,ENST00000443128,NM_001142302,NM_014157,uc002ene.2,uc010vid.1_5end | |association_with_transcript=0bp_to_ENST00000219299,ENST00000443128,NM_001142302,NM_014157,uc002ene.2,uc010vid.1_5end | ||
|cluster_id=chr16:58283814..58283918,+ | |||
|description=CAGE_peak_1_at_CCDC113_5end | |description=CAGE_peak_1_at_CCDC113_5end | ||
|id=chr16:58283814..58283918,+ | |id=chr16:58283814..58283918,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.18e-09!254;CL:0002076!6.91e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.18e-09!254;CL:0002076!6.91e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.15e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.31e-09;82!UBERON:0008947;1.13e-07;29 | |||
|ontology_enrichment_disease=DOID:0050687!7.13e-17!143;DOID:305!3.40e-15!106;DOID:1749!6.31e-08!14;DOID:14566!7.25e-08!239;DOID:162!6.07e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.72e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.40e-16,143;DOID:305,7.34e-15,106;DOID:1749,5.62e-08,14;DOID:14566,1.75e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.18e-26!365;UBERON:0000073!2.28e-24!94;UBERON:0001016!2.28e-24!94;UBERON:0001049!3.67e-24!57;UBERON:0005068!3.67e-24!57;UBERON:0006241!3.67e-24!57;UBERON:0007135!3.67e-24!57;UBERON:0004121!9.24e-24!169;UBERON:0005743!2.17e-23!86;UBERON:0000924!4.56e-23!173;UBERON:0006601!4.56e-23!173;UBERON:0001017!7.75e-23!82;UBERON:0003075!2.74e-21!86;UBERON:0007284!2.74e-21!86;UBERON:0002780!4.60e-21!41;UBERON:0001890!4.60e-21!41;UBERON:0006240!4.60e-21!41;UBERON:0000481!9.84e-21!347;UBERON:0000033!1.49e-20!123;UBERON:0003080!3.00e-20!42;UBERON:0002346!3.84e-20!90;UBERON:0000955!6.46e-20!69;UBERON:0006238!6.46e-20!69;UBERON:0002616!2.18e-19!59;UBERON:0000153!4.46e-19!129;UBERON:0007811!4.46e-19!129;UBERON:0001893!2.16e-17!34;UBERON:0002020!4.85e-17!34;UBERON:0003528!4.85e-17!34;UBERON:0002791!9.20e-17!33;UBERON:0001869!1.24e-16!32;UBERON:0003056!1.37e-16!61;UBERON:0000483!2.31e-16!309;UBERON:0000119!1.42e-15!312;UBERON:0002619!5.28e-13!22;UBERON:0000956!1.04e-12!25;UBERON:0000203!1.04e-12!25;UBERON:0000064!1.11e-12!219;UBERON:0004111!5.51e-12!241;UBERON:0001950!5.72e-12!20;UBERON:0007023!6.13e-12!115;UBERON:0000468!2.26e-11!659;UBERON:0000477!2.66e-11!286;UBERON:0000062!1.56e-10!511;UBERON:0000922!1.77e-10!612;UBERON:0000467!2.00e-10!625;UBERON:0000480!2.45e-10!626;UBERON:0000025!6.11e-10!194;UBERON:0002050!2.88e-09!605;UBERON:0005423!2.88e-09!605;UBERON:0000923!3.29e-09!604;UBERON:0005291!3.29e-09!604;UBERON:0006598!3.29e-09!604;UBERON:0002532!3.29e-09!604;UBERON:0004119!4.35e-09!169;UBERON:0000925!4.35e-09!169;UBERON:0006595!4.35e-09!169;UBERON:0001007!2.50e-08!155;UBERON:0001555!2.50e-08!155;UBERON:0007026!2.50e-08!155;UBERON:0001004!6.69e-08!72;UBERON:0005157!9.24e-08!51;UBERON:0008947!9.41e-08!38;UBERON:0003258!9.41e-08!38;UBERON:0003104!3.49e-07!238;UBERON:0009142!3.49e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.19e-15;41!UBERON:0001890;2.19e-15;41!UBERON:0001893;2.32e-15;34!UBERON:0001869;3.28e-15;32!UBERON:0003528;6.14e-15;34!UBERON:0002020;6.14e-15;34!UBERON:0002791;7.74e-15;32!UBERON:0000073;4.44e-14;53!UBERON:0002616;4.44e-14;53!UBERON:0002619;3.88e-13;22!UBERON:0000956;7.34e-13;25!UBERON:0000203;7.34e-13;25!UBERON:0001950;4.34e-12;20!UBERON:0000955;2.59e-10;68!UBERON:0001017;2.70e-09;75!UBERON:0001016;5.14e-09;83 | |||
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| ||
|short_description=p1@CCDC113 | |short_description=p1@CCDC113 | ||
}} | }} |
Latest revision as of 05:45, 17 September 2015
Short description: | p1@CCDC113 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC113_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000219299, ENST00000443128, NM_001142302, NM_014157, uc002ene.2, uc010vid.1_5end |
EntrezGene: | CCDC113 |
HGNC: | 25002 |
UniProt: | Q9H0I3B4DR20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.15e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.40e-16 | 143 |
carcinoma | 7.34e-15 | 106 |
squamous cell carcinoma | 5.62e-08 | 14 |
disease of cellular proliferation | 1.75e-07 | 239 |