FFCP PHASE1:Hg19::chr1:153585571..153585629,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140576 | |EntrezGene=140576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20441 | |HGNC=20441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000474991_5end | |association_with_transcript=0bp_to_ENST00000474991_5end | ||
|cluster_id=chr1:153585571..153585629,- | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_2_at_S100A16_5end | |description=CAGE_peak_2_at_S100A16_5end | ||
|id=chr1:153585571..153585629,- | |id=chr1:153585571..153585629,- | ||
|ontology_enrichment_celltype=CL:0000220!2.87e-27!246;CL:0000066!2.91e-27!254;CL:0002321!8.79e-27!248;CL:0000055!5.05e-16!180;CL:0002076!1.25e-13!43;CL:0000680!8.37e-12!57;CL:0000056!8.37e-12!57;CL:0000355!8.37e-12!57;CL:0000222!2.52e-11!119;CL:0000183!2.63e-11!59;CL:0000548!5.10e-11!679;CL:0000004!5.10e-11!679;CL:0000255!5.10e-11!679;CL:0000187!8.00e-11!54;CL:0000223!1.21e-10!59;CL:0000012!3.15e-10!682;CL:0000192!3.08e-09!42;CL:0000514!3.08e-09!42;CL:0000393!3.71e-09!60;CL:0000211!3.71e-09!60;CL:0000076!4.40e-09!62;CL:0000057!2.23e-08!75;CL:0000359!2.26e-08!32;CL:0002368!3.43e-07!13 | |ontology_enrichment_celltype=CL:0000220!2.87e-27!246;CL:0000066!2.91e-27!254;CL:0002321!8.79e-27!248;CL:0000055!5.05e-16!180;CL:0002076!1.25e-13!43;CL:0000680!8.37e-12!57;CL:0000056!8.37e-12!57;CL:0000355!8.37e-12!57;CL:0000222!2.52e-11!119;CL:0000183!2.63e-11!59;CL:0000548!5.10e-11!679;CL:0000004!5.10e-11!679;CL:0000255!5.10e-11!679;CL:0000187!8.00e-11!54;CL:0000223!1.21e-10!59;CL:0000012!3.15e-10!682;CL:0000192!3.08e-09!42;CL:0000514!3.08e-09!42;CL:0000393!3.71e-09!60;CL:0000211!3.71e-09!60;CL:0000076!4.40e-09!62;CL:0000057!2.23e-08!75;CL:0000359!2.26e-08!32;CL:0002368!3.43e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.21e-11;42!CL:0000359;4.31e-08;32!CL:0002368;3.03e-07;13!CL:0000192;3.86e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.28e-26,253;CL:0002321,1.46e-25,250;CL:0002076,5.44e-14,42;CL:0000680,5.91e-12,58;CL:0000056,5.91e-12,58;CL:0000355,5.91e-12,58;CL:0000187,5.78e-11,55;CL:0000223,6.80e-11,58;CL:0000222,7.86e-11,121;CL:0000192,2.37e-09,43;CL:0000514,2.37e-09,43;CL:0000393,5.43e-09,61;CL:0000211,5.43e-09,61;CL:0000359,1.86e-08,32;CL:0000076,2.01e-08,63;CL:0000057,2.07e-08,76;CL:0002368,2.92e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000514;3.86e-07;43!CL:0000355;7.63e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.12e-23!365;UBERON:0003104!1.52e-21!238;UBERON:0009142!1.52e-21!238;UBERON:0000481!1.90e-21!347;UBERON:0002100!4.60e-20!216;UBERON:0005256!5.26e-18!143;UBERON:0000468!7.81e-17!659;UBERON:0000119!2.97e-16!312;UBERON:0000483!4.19e-16!309;UBERON:0000486!7.43e-16!82;UBERON:0000467!7.96e-16!625;UBERON:0000480!1.21e-15!626;UBERON:0000914!1.06e-14!83;UBERON:0002329!1.06e-14!83;UBERON:0003077!1.06e-14!83;UBERON:0003059!1.06e-14!83;UBERON:0007282!1.06e-14!83;UBERON:0009618!1.06e-14!83;UBERON:0007285!1.06e-14!83;UBERON:0002050!2.06e-13!605;UBERON:0005423!2.06e-13!605;UBERON:0000922!2.63e-13!612;UBERON:0003102!3.10e-13!95;UBERON:0000923!3.35e-13!604;UBERON:0005291!3.35e-13!604;UBERON:0006598!3.35e-13!604;UBERON:0002532!3.35e-13!604;UBERON:0004290!8.29e-13!70;UBERON:0004119!1.03e-12!169;UBERON:0000925!1.03e-12!169;UBERON:0006595!1.03e-12!169;UBERON:0000490!2.42e-12!138;UBERON:0003914!7.97e-12!118;UBERON:0001637!7.28e-11!42;UBERON:0003509!7.28e-11!42;UBERON:0004572!7.28e-11!42;UBERON:0001134!2.09e-10!61;UBERON:0002036!2.09e-10!61;UBERON:0003082!2.09e-10!61;UBERON:0001048!2.44e-10!168;UBERON:0000064!4.33e-10!219;UBERON:0002385!4.42e-10!63;UBERON:0001015!4.42e-10!63;UBERON:0000383!4.42e-10!63;UBERON:0004872!2.50e-09!84;UBERON:0000464!4.90e-09!104;UBERON:0000477!5.18e-09!286;UBERON:0001007!7.90e-09!155;UBERON:0001555!7.90e-09!155;UBERON:0007026!7.90e-09!155;UBERON:0003100!1.72e-08!41;UBERON:0004573!2.09e-08!33;UBERON:0004571!2.09e-08!33;UBERON:0000926!2.61e-08!448;UBERON:0004120!2.61e-08!448;UBERON:0006603!2.61e-08!448;UBERON:0000077!5.07e-08!130;UBERON:0000466!5.45e-08!126;UBERON:0001004!5.50e-08!72;UBERON:0001981!7.07e-08!60;UBERON:0007500!7.07e-08!60;UBERON:0004537!7.07e-08!60;UBERON:0006965!7.07e-08!60;UBERON:0001444!1.17e-07!48;UBERON:0004111!1.26e-07!241;UBERON:0000062!1.55e-07!511;UBERON:0003103!2.18e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.09e-08;42!UBERON:0003509;7.09e-08;42!UBERON:0004572;7.09e-08;42!UBERON:0004573;1.41e-07;33!UBERON:0004571;1.41e-07;33!UBERON:0003100;6.57e-07;41 | |||
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| ||
|short_description=p2@S100A16 | |short_description=p2@S100A16 | ||
}} | }} |
Latest revision as of 06:31, 17 September 2015
Short description: | p2@S100A16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_S100A16_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 0bp_to_ENST00000474991_5end |
EntrezGene: | S100A16 |
HGNC: | 20441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.28e-26 | 253 |
embryonic cell | 1.46e-25 | 250 |
endo-epithelial cell | 5.44e-14 | 42 |
muscle precursor cell | 5.91e-12 | 58 |
myoblast | 5.91e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.91e-12 | 58 |
muscle cell | 5.78e-11 | 55 |
endodermal cell | 6.80e-11 | 58 |
mesodermal cell | 7.86e-11 | 121 |
smooth muscle cell | 2.37e-09 | 43 |
smooth muscle myoblast | 2.37e-09 | 43 |
electrically responsive cell | 5.43e-09 | 61 |
electrically active cell | 5.43e-09 | 61 |
vascular associated smooth muscle cell | 1.86e-08 | 32 |
squamous epithelial cell | 2.01e-08 | 63 |
fibroblast | 2.07e-08 | 76 |
respiratory epithelial cell | 2.92e-07 | 13 |