FFCP PHASE1:Hg19::chr12:129338008..129338108,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:129338008..129338108,+ to FFCP PHASE1:Hg19::chr12:129338008..129338108,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=144423 | |EntrezGene=144423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26483 | |HGNC=26483 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MS3 | |UniProt=Q96MS3 | ||
|association_with_transcript=0bp_to_ENST00000281703,ENST00000442111,NM_144669,uc001uhx.1,uc001uhy.1_5end | |||
|cluster_id=chr12:129338008..129338108,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_GLT1D1_5end | |||
|id=chr12:129338008..129338108,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.23e-36!76;CL:0002057!2.66e-36!42;CL:0002194!1.34e-32!63;CL:0000576!1.34e-32!63;CL:0000040!1.34e-32!63;CL:0000559!1.34e-32!63;CL:0000860!1.55e-32!45;CL:0002009!6.97e-31!65;CL:0000738!1.14e-29!140;CL:0000839!6.67e-28!70;CL:0000557!3.45e-27!71;CL:0002087!3.20e-25!119;CL:0002031!1.19e-20!124;CL:0000763!2.58e-19!112;CL:0000049!2.58e-19!112;CL:0000037!2.79e-19!172;CL:0000566!2.79e-19!172;CL:0002032!3.58e-17!165;CL:0000837!3.58e-17!165;CL:0000988!1.62e-16!182;CL:0000094!9.04e-09!8;CL:0002393!4.48e-08!9;CL:0002397!4.48e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.47e-33;33!CL:0002057;4.47e-33;33!CL:0000473;6.20e-29;39!CL:0000234;6.20e-29;39!CL:0000576;2.84e-27;48!CL:0000766;1.36e-20;69!CL:0000094;1.68e-10;8!CL:0002087;9.06e-10;104!CL:0000763;7.37e-09;100!CL:0002393;1.04e-07;6!CL:0002397;1.04e-07;6!CL:0000738;1.39e-07;136!CL:0000081;5.52e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.88e-46,48;CL:0000234,7.88e-46,48;CL:0000860,1.12e-44,42;CL:0002057,1.12e-44,42;CL:0000766,1.83e-44,72;CL:0002194,2.18e-40,59;CL:0000576,2.18e-40,59;CL:0000040,2.18e-40,59;CL:0000559,2.18e-40,59;CL:0002009,1.98e-38,61;CL:0000839,4.57e-34,66;CL:0000557,2.83e-33,67;CL:0000738,2.30e-32,136;CL:0002087,1.27e-27,115;CL:0000763,2.72e-24,108;CL:0000049,2.72e-24,108;CL:0002031,3.13e-22,120;CL:0000037,5.91e-22,168;CL:0000988,1.56e-19,177;CL:0002032,2.86e-19,161;CL:0000837,2.86e-19,161;CL:0000094,1.70e-10,8;CL:0002393,1.23e-09,9;CL:0002397,1.23e-09,9;CL:0000081,5.56e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.87e-32;42!CL:0000049;6.88e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.73e-46!115;UBERON:0002390!2.01e-30!102;UBERON:0003061!2.01e-30!102;UBERON:0002193!6.69e-27!112;UBERON:0001049!5.78e-25!57;UBERON:0005068!5.78e-25!57;UBERON:0006241!5.78e-25!57;UBERON:0007135!5.78e-25!57;UBERON:0005743!2.66e-22!86;UBERON:0002371!1.25e-21!80;UBERON:0000073!9.54e-21!94;UBERON:0001016!9.54e-21!94;UBERON:0002780!1.10e-20!41;UBERON:0001890!1.10e-20!41;UBERON:0006240!1.10e-20!41;UBERON:0001017!1.24e-20!82;UBERON:0002616!4.85e-20!59;UBERON:0003080!7.43e-20!42;UBERON:0003075!1.52e-19!86;UBERON:0007284!1.52e-19!86;UBERON:0001474!1.98e-19!86;UBERON:0000955!5.85e-19!69;UBERON:0006238!5.85e-19!69;UBERON:0002346!1.93e-18!90;UBERON:0002405!5.29e-18!115;UBERON:0001893!2.22e-17!34;UBERON:0002020!2.45e-17!34;UBERON:0003528!2.45e-17!34;UBERON:0001869!1.05e-16!32;UBERON:0002791!1.18e-16!33;UBERON:0003056!3.45e-15!61;UBERON:0004765!6.64e-15!101;UBERON:0001434!6.64e-15!101;UBERON:0002619!2.44e-14!22;UBERON:0001950!2.94e-13!20;UBERON:0000956!1.32e-12!25;UBERON:0000203!1.32e-12!25;UBERON:0000153!3.31e-09!129;UBERON:0007811!3.31e-09!129;UBERON:0000178!6.93e-09!15;UBERON:0000179!6.93e-09!15;UBERON:0000463!6.93e-09!15;UBERON:0000033!9.48e-09!123;UBERON:0000062!1.13e-07!511;UBERON:0004121!3.41e-07!169;UBERON:0000924!6.44e-07!173;UBERON:0006601!6.44e-07!173;UBERON:0000922!7.85e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.60e-17;22!UBERON:0003528;1.02e-16;34!UBERON:0002020;1.02e-16;34!UBERON:0001893;1.41e-16;34!UBERON:0001869;1.80e-16;32!UBERON:0001950;3.22e-16;20!UBERON:0002791;3.85e-16;32!UBERON:0002780;5.15e-15;41!UBERON:0001890;5.15e-15;41!UBERON:0000956;1.20e-14;25!UBERON:0000203;1.20e-14;25!UBERON:0000073;3.70e-14;53!UBERON:0002616;3.70e-14;53!UBERON:0000178;4.35e-11;15!UBERON:0000179;4.35e-11;15!UBERON:0000463;4.35e-11;15!UBERON:0000955;1.92e-10;68!UBERON:0001017;3.93e-10;75!UBERON:0001016;2.72e-08;83!UBERON:0007023;3.12e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-36,98;UBERON:0003061,1.02e-36,98;UBERON:0002193,2.86e-32,108;UBERON:0007023,1.72e-29,114;UBERON:0002371,4.08e-27,76;UBERON:0001049,1.09e-26,56;UBERON:0005068,1.09e-26,56;UBERON:0006241,1.09e-26,56;UBERON:0007135,1.09e-26,56;UBERON:0000073,5.99e-25,53;UBERON:0002616,5.99e-25,53;UBERON:0001474,1.01e-24,82;UBERON:0002405,3.97e-23,93;UBERON:0001017,3.12e-21,81;UBERON:0002780,3.75e-21,41;UBERON:0001890,3.75e-21,41;UBERON:0003080,3.75e-21,41;UBERON:0006240,3.75e-21,41;UBERON:0004765,6.51e-21,90;UBERON:0000955,2.37e-20,68;UBERON:0006238,2.37e-20,68;UBERON:0001016,3.38e-20,89;UBERON:0001893,2.29e-19,34;UBERON:0003528,2.57e-19,34;UBERON:0002020,2.57e-19,34;UBERON:0001869,1.60e-18,32;UBERON:0001434,5.10e-18,100;UBERON:0002791,5.12e-18,32;UBERON:0002619,1.49e-17,22;UBERON:0003075,6.16e-17,82;UBERON:0007284,6.16e-17,82;UBERON:0001950,3.26e-16,20;UBERON:0002346,1.88e-15,86;UBERON:0000956,1.13e-14,25;UBERON:0000203,1.13e-14,25;UBERON:0003056,4.13e-14,61;UBERON:0000178,4.43e-11,15;UBERON:0000179,4.43e-11,15;UBERON:0000463,4.43e-11,15;UBERON:0010371,2.43e-10,104;UBERON:0003081,4.59e-08,203;UBERON:0010314,3.00e-07,132;UBERON:0003076,8.53e-07,15;UBERON:0003057,8.53e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0,0.136874425072884,0,16.8109492645493,14.9423072798901,12.9872789167571,12.9810211360138,10.3633937486247,23.6868668673596,0,0,0,0,0,0,28.8077612436576,26.6724115135288,32.7686414780936,1.34349284543955,1.6194683300949,1.03030227053675,36.4949579336707,24.9398122834614,30.8081757708527,25.799623096531,19.7360586250476,17.6532631410209,18.1246207162955,21.7736600549736,19.391542850864,25.5111803745098,14.2006630388442,24.3767675869815,24.6597464800812,18.8305243539914,23.820689351179,19.5893691117378,9.30694178520671,24.2948107803636,29.3567657166177,28.722766697515,29.8357325372886,24.9579945220582,12.4824749432051,23.6672454618319,23.8686231993906,17.7304192262868,22.8048286940372,20.5835830895345,12.5214396235772,18.3548184715713,10.985274888221,17.4335525971336,15.3050811221114,43.2465229914006,40.5477610672067,41.7886525412408,3.99017841237748,5.56966696157452,3.47061892152804,0,3.82297027883492,0,3.84057200309856,0.800791974072025,1.14950487990897,2.64417949113945,0.954053754535364,0,0,0,0,1.68152568894461,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0.95569624297229,0.651083453856419,0,1.35517607169996,0.895906278080929,6.24653632761729,3.07810427657222,2.46338399076314,0.403213486449465,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0,0.087834785693126,4.38779902917337,0,0,0,0,0.26591592103773,20.7486843145648,52.0515368809916,29.7166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,312.31958932347,349.002237733493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07355300420312,3.18071443971565,2.78865462886844,1.55491582523056,2.27088765788066,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,10.1404027857465,15.725235466842,14.1789577603537,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,3.20082107913617,1.40402559083543,4.7561971932393,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0.205476322550383,0,0,1.18218456121156,0,1.41177339907723,0,0,0,1.67516265334349,0,231.443170399679,209.413021442817,289.262028378353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7519373583901,20.0614206761314,12.0602140317892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07740150139667,0.656029291399411,1.95227036798582,4.01859945426117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,4.0481834334015,0,0,0,0,42.6255991755022,44.3489580142578,62.6611905891579,35.020070992295,40.7248650355332,59.65954462973,47.5227664769541,75.3468917479557,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53600108997424,0,1.22896305723383,0.447352215784832,0.333698283423817,0,0,0,0,0,0,0,0.293016358543788,0.242721043499027,0,0,0.23874448473769,0.593929361665277,0,4.97073823883149,5.20476840718897,0,0,0,1.19548792950642,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,33.5276329285716,0,10.6626602070474,8.90573742353772,9.98068990005971,0,0,0,0,0,0,0,0,1.38899995946634,3.54296554325536,9.40652221278182,3.05163472634166,4.20201187738654,7.09314285488514,8.55603048900493,0,0,0.615602068030377,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,1.55022605855557,1.60515529459758,3.27970224015475,0,0,0,0.789168805698781,0,2.75465485467441,3.91756793696625,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,1.1473296469895,2.93774963014692,0,0,12.8520915790434,2.93327074102205,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,5.4037825983881,0.821432273351958,0,0,0,0.279282401272254,0.687481272035051,0,1.19807400299395,1.28767814440971,2.00854311697685,0.671834724867263,0,0,0,0,0.0674035438541849,0,0,6.36183751847443,2.99647493445466,1.44677833618517,0.962776056180637,0.415440338029185,0,0,14.5798935979259,0,0.157611414598396,1.04909176269996,0,0,0.191915197319445,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,16.4138501719452,15.9008266694666,3.10279095267721,4.23144325576608,0,0,2.88326013932776,0.943225830597996,3.72815149812476,4.96166021811951,0,0,0,0,0,0,0,0,7.08854543973589,9.39602239745116,7.51145584238999,4.0138643698305,2.88415533995816,4.65723022060376,1.93688088910723,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08795433572169,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,5.66859588222096,0,1.32864840313363,0.327130788511688,0,0,0,0,0,0,0,0,0,0,5.62735233736067,0,0,2.94866023118438,0,0.637724760305049,0,0,0,8.91137718514163,0,0,0,11.6897189675556,8.5017945795351,5.58718506700029,11.0762836690008,3.27693205088234,15.4220672995206,7.9123066359607,1.42769420259154,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,14.9933437852836,7.81078098613847,5.99391709853434,13.5709833814961,4.37579847214576,0.548257766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| 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| ||
|short_description=p1@GLT1D1 | |||
}} | }} |
Latest revision as of 07:48, 17 September 2015
Short description: | p1@GLT1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLT1D1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000281703, ENST00000442111, NM_144669, uc001uhx.1, uc001uhy.1_5end |
EntrezGene: | GLT1D1 |
HGNC: | 26483 |
UniProt: | Q96MS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.88e-46 | 48 |
phagocyte | 7.88e-46 | 48 |
classical monocyte | 1.12e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-44 | 42 |
myeloid leukocyte | 1.83e-44 | 72 |
monopoietic cell | 2.18e-40 | 59 |
monocyte | 2.18e-40 | 59 |
monoblast | 2.18e-40 | 59 |
promonocyte | 2.18e-40 | 59 |
macrophage dendritic cell progenitor | 1.98e-38 | 61 |
myeloid lineage restricted progenitor cell | 4.57e-34 | 66 |
granulocyte monocyte progenitor cell | 2.83e-33 | 67 |
leukocyte | 2.30e-32 | 136 |
nongranular leukocyte | 1.27e-27 | 115 |
myeloid cell | 2.72e-24 | 108 |
common myeloid progenitor | 2.72e-24 | 108 |
hematopoietic lineage restricted progenitor cell | 3.13e-22 | 120 |
hematopoietic stem cell | 5.91e-22 | 168 |
hematopoietic cell | 1.56e-19 | 177 |
hematopoietic oligopotent progenitor cell | 2.86e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.86e-19 | 161 |
granulocyte | 1.70e-10 | 8 |
intermediate monocyte | 1.23e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.23e-09 | 9 |
blood cell | 5.56e-07 | 11 |