FFCP PHASE1:Hg19::chr13:41495851..41495883,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:41495851..41495883,- to FFCP PHASE1:Hg19::chr13:41495851..41495883,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20513 | |HGNC=20513 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1B1 | |UniProt=G3V1B1 | ||
|association_with_transcript=0bp_to_ENST00000494063_5end | |||
|cluster_id=chr13:41495851..41495883,- | |||
|coexpression_cluster_id=C1381 | |||
|description=CAGE_peak_1_at_SUGT1P3_5end | |||
|id=chr13:41495851..41495883,- | |||
|ontology_enrichment_celltype=CL:0000838!3.48e-11!52;CL:0000542!1.33e-10!53;CL:0000051!1.33e-10!53;CL:0000791!7.76e-09!18;CL:0000789!7.76e-09!18;CL:0002420!7.76e-09!18;CL:0002419!7.76e-09!18;CL:0000790!7.76e-09!18;CL:0000084!1.73e-07!25;CL:0000827!1.73e-07!25;CL:0002031!1.90e-07!124;CL:0002087!2.50e-07!119;CL:0000738!2.52e-07!140;CL:0000037!8.64e-07!172;CL:0000566!8.64e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.96e-09;18!CL:0000789;4.96e-09;18!CL:0002419;4.96e-09;18!CL:0000084;1.25e-07;25!CL:0000542;8.03e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.13e-11,52;CL:0000542,1.21e-10,53;CL:0000051,1.21e-10,53;CL:0000791,7.09e-09,18;CL:0000789,7.09e-09,18;CL:0002420,7.09e-09,18;CL:0002419,7.09e-09,18;CL:0000790,7.09e-09,18;CL:0002031,3.21e-08,120;CL:0000738,3.89e-08,136;CL:0002087,4.13e-08,115;CL:0000037,1.47e-07,168;CL:0000084,1.63e-07,25;CL:0000827,1.63e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.95e-09;82!CL:0000790;4.96e-09;18!CL:0000051;8.03e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.22e-42!115;UBERON:0001049!2.85e-27!57;UBERON:0005068!2.85e-27!57;UBERON:0006241!2.85e-27!57;UBERON:0007135!2.85e-27!57;UBERON:0002616!1.69e-22!59;UBERON:0003080!5.71e-22!42;UBERON:0002780!7.17e-22!41;UBERON:0001890!7.17e-22!41;UBERON:0006240!7.17e-22!41;UBERON:0000955!8.49e-22!69;UBERON:0006238!8.49e-22!69;UBERON:0001017!6.28e-21!82;UBERON:0000073!2.84e-20!94;UBERON:0001016!2.84e-20!94;UBERON:0005743!6.73e-20!86;UBERON:0001893!5.48e-18!34;UBERON:0002020!8.33e-18!34;UBERON:0003528!8.33e-18!34;UBERON:0002346!2.30e-17!90;UBERON:0002791!2.35e-17!33;UBERON:0003075!5.73e-17!86;UBERON:0007284!5.73e-17!86;UBERON:0001869!1.14e-16!32;UBERON:0002619!1.46e-14!22;UBERON:0001950!1.58e-13!20;UBERON:0003056!1.96e-13!61;UBERON:0000956!1.95e-12!25;UBERON:0000203!1.95e-12!25;UBERON:0000153!8.65e-12!129;UBERON:0007811!8.65e-12!129;UBERON:0000033!4.04e-10!123;UBERON:0000924!4.09e-09!173;UBERON:0006601!4.09e-09!173;UBERON:0004121!1.03e-08!169;UBERON:0002308!5.91e-07!9;UBERON:0000125!5.91e-07!9;UBERON:0002420!8.37e-07!9;UBERON:0007245!8.37e-07!9;UBERON:0010009!8.37e-07!9;UBERON:0010011!8.37e-07!9;UBERON:0000454!8.37e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.19e-16;41!UBERON:0001890;3.19e-16;41!UBERON:0001893;1.58e-15;34!UBERON:0003528;2.13e-15;34!UBERON:0002020;2.13e-15;34!UBERON:0002791;2.51e-15;32!UBERON:0001869;2.57e-15;32!UBERON:0000073;6.78e-15;53!UBERON:0002616;6.78e-15;53!UBERON:0002619;8.19e-15;22!UBERON:0001950;9.39e-14;20!UBERON:0000956;1.04e-12;25!UBERON:0000203;1.04e-12;25!UBERON:0007023;4.21e-12;114!UBERON:0001017;1.14e-10;75!UBERON:0000955;5.00e-10;68!UBERON:0001016;2.44e-09;83!UBERON:0000125;5.23e-07;9!UBERON:0002308;5.23e-07;9!UBERON:0002420;7.62e-07;9!UBERON:0007245;7.62e-07;9!UBERON:0010009;7.62e-07;9!UBERON:0010011;7.62e-07;9!UBERON:0000454;7.62e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.36e-42,114;UBERON:0001049,2.76e-27,56;UBERON:0005068,2.76e-27,56;UBERON:0006241,2.76e-27,56;UBERON:0007135,2.76e-27,56;UBERON:0000073,1.27e-25,53;UBERON:0002616,1.27e-25,53;UBERON:0002780,5.58e-22,41;UBERON:0001890,5.58e-22,41;UBERON:0003080,5.58e-22,41;UBERON:0006240,5.58e-22,41;UBERON:0000955,1.17e-21,68;UBERON:0006238,1.17e-21,68;UBERON:0001016,6.28e-21,89;UBERON:0001017,1.26e-20,81;UBERON:0002346,2.65e-18,86;UBERON:0001893,4.48e-18,34;UBERON:0003075,6.34e-18,82;UBERON:0007284,6.34e-18,82;UBERON:0003528,6.82e-18,34;UBERON:0002020,6.82e-18,34;UBERON:0002791,9.09e-17,32;UBERON:0001869,9.47e-17,32;UBERON:0002619,1.25e-14,22;UBERON:0003056,6.19e-14,61;UBERON:0001950,1.37e-13,20;UBERON:0000956,1.70e-12,25;UBERON:0000203,1.70e-12,25;UBERON:0010371,2.25e-09,104;UBERON:0004121,3.86e-09,171;UBERON:0000924,3.86e-09,171;UBERON:0006601,3.86e-09,171;UBERON:0011216,4.31e-09,223;UBERON:0010314,4.83e-08,132;UBERON:0000125,5.53e-07,9;UBERON:0002308,5.53e-07,9;UBERON:0002420,7.84e-07,9;UBERON:0007245,7.84e-07,9;UBERON:0010009,7.84e-07,9;UBERON:0010011,7.84e-07,9;UBERON:0000454,7.84e-07,9 | |||
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| ||
|short_description=p1@SUGT1P3 | |||
}} | }} |
Latest revision as of 08:22, 17 September 2015
Short description: | p1@SUGT1P3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SUGT1P3_5end |
Coexpression cluster: | C1381_corpus_thyroid_cerebellum_pineal_thalamus_pituitary_substantia |
Association with transcript: | 0bp_to_ENST00000494063_5end |
EntrezGene: | NA |
HGNC: | 20513 |
UniProt: | G3V1B1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.13e-11 | 52 |
lymphocyte | 1.21e-10 | 53 |
common lymphoid progenitor | 1.21e-10 | 53 |
mature alpha-beta T cell | 7.09e-09 | 18 |
alpha-beta T cell | 7.09e-09 | 18 |
immature T cell | 7.09e-09 | 18 |
mature T cell | 7.09e-09 | 18 |
immature alpha-beta T cell | 7.09e-09 | 18 |
hematopoietic lineage restricted progenitor cell | 3.21e-08 | 120 |
leukocyte | 3.89e-08 | 136 |
nongranular leukocyte | 4.13e-08 | 115 |
hematopoietic stem cell | 1.47e-07 | 168 |
T cell | 1.63e-07 | 25 |
pro-T cell | 1.63e-07 | 25 |