FFCP PHASE1:Hg19::chr1:28503176..28503208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5724 | |EntrezGene=5724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9582 | |HGNC=9582 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001bpl.2_5end | |association_with_transcript=0bp_to_uc001bpl.2_5end | ||
|cluster_id=chr1:28503176..28503208,- | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_1_at_PTAFR_5end | |description=CAGE_peak_1_at_PTAFR_5end | ||
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|ontology_enrichment_celltype=CL:0000037!9.67e-51!172;CL:0000566!9.67e-51!172;CL:0000766!6.50e-49!76;CL:0000763!9.86e-49!112;CL:0000049!9.86e-49!112;CL:0002032!4.01e-48!165;CL:0000837!4.01e-48!165;CL:0000988!3.77e-45!182;CL:0000738!1.06e-44!140;CL:0000557!4.23e-42!71;CL:0000839!4.49e-42!70;CL:0002009!8.85e-39!65;CL:0002194!1.37e-38!63;CL:0000576!1.37e-38!63;CL:0000040!1.37e-38!63;CL:0000559!1.37e-38!63;CL:0002031!1.54e-38!124;CL:0002087!1.04e-36!119;CL:0002057!1.29e-36!42;CL:0000860!9.30e-33!45;CL:0000094!3.11e-08!8;CL:0002393!1.00e-07!9;CL:0002397!1.00e-07!9;CL:0000945!3.19e-07!24;CL:0000826!3.19e-07!24 | |ontology_enrichment_celltype=CL:0000037!9.67e-51!172;CL:0000566!9.67e-51!172;CL:0000766!6.50e-49!76;CL:0000763!9.86e-49!112;CL:0000049!9.86e-49!112;CL:0002032!4.01e-48!165;CL:0000837!4.01e-48!165;CL:0000988!3.77e-45!182;CL:0000738!1.06e-44!140;CL:0000557!4.23e-42!71;CL:0000839!4.49e-42!70;CL:0002009!8.85e-39!65;CL:0002194!1.37e-38!63;CL:0000576!1.37e-38!63;CL:0000040!1.37e-38!63;CL:0000559!1.37e-38!63;CL:0002031!1.54e-38!124;CL:0002087!1.04e-36!119;CL:0002057!1.29e-36!42;CL:0000860!9.30e-33!45;CL:0000094!3.11e-08!8;CL:0002393!1.00e-07!9;CL:0002397!1.00e-07!9;CL:0000945!3.19e-07!24;CL:0000826!3.19e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-29;33!CL:0002057;1.30e-29;33!CL:0000473;2.75e-29;39!CL:0000234;2.75e-29;39!CL:0000576;9.43e-25;48!CL:0000766;6.37e-23;69!CL:0000763;1.79e-15;100!CL:0002087;3.78e-11;104!CL:0000738;9.31e-11;136!CL:0000094;9.49e-09;8!CL:0000988;9.75e-08;177!CL:0000235;8.43e-07;6 | |ontology_enrichment_celltype_v019=CL:0000860;1.30e-29;33!CL:0002057;1.30e-29;33!CL:0000473;2.75e-29;39!CL:0000234;2.75e-29;39!CL:0000576;9.43e-25;48!CL:0000766;6.37e-23;69!CL:0000763;1.79e-15;100!CL:0002087;3.78e-11;104!CL:0000738;9.31e-11;136!CL:0000094;9.49e-09;8!CL:0000988;9.75e-08;177!CL:0000235;8.43e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.27e-55,72;CL:0000763,4.37e-49,108;CL:0000049,4.37e-49,108;CL:0000839,7.88e-48,66;CL:0000037,1.33e-47,168;CL:0000557,1.18e-46,67;CL:0002032,1.29e-45,161;CL:0000837,1.29e-45,161;CL:0000473,6.94e-45,48;CL:0000234,6.94e-45,48;CL:0000738,1.16e-44,136;CL:0002194,3.84e-44,59;CL:0000576,3.84e-44,59;CL:0000040,3.84e-44,59;CL:0000559,3.84e-44,59;CL:0002009,4.19e-43,61;CL:0000988,6.35e-43,177;CL:0002031,1.60e-39,120;CL:0000860,2.29e-39,42;CL:0002057,2.29e-39,42;CL:0002087,1.24e-37,115;CL:0000094,9.35e-09,8;CL:0002393,3.30e-08,9;CL:0002397,3.30e-08,9;CL:0000235,8.51e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.74e-28;42!CL:0000049;2.75e-13;108 | |ontology_enrichment_development_v019=CL:0002057;1.74e-28;42!CL:0000049;2.75e-13;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.18e-46!115;UBERON:0002390!1.84e-42!102;UBERON:0003061!1.84e-42!102;UBERON:0002193!5.31e-38!112;UBERON:0002371!2.44e-35!80;UBERON:0001474!7.13e-31!86;UBERON:0002405!1.69e-25!115;UBERON:0004765!9.11e-24!101;UBERON:0001434!9.11e-24!101;UBERON:0001049!1.54e-16!57;UBERON:0005068!1.54e-16!57;UBERON:0006241!1.54e-16!57;UBERON:0007135!1.54e-16!57;UBERON:0003080!4.45e-13!42;UBERON:0002780!9.77e-13!41;UBERON:0001890!9.77e-13!41;UBERON:0006240!9.77e-13!41;UBERON:0002616!1.85e-12!59;UBERON:0003081!1.10e-11!216;UBERON:0001893!2.12e-10!34;UBERON:0002020!2.30e-10!34;UBERON:0003528!2.30e-10!34;UBERON:0002791!4.85e-10!33;UBERON:0000955!8.97e-10!69;UBERON:0006238!8.97e-10!69;UBERON:0001017!1.44e-09!82;UBERON:0003075!1.98e-09!86;UBERON:0007284!1.98e-09!86;UBERON:0001869!2.68e-09!32;UBERON:0000479!4.21e-09!787;UBERON:0005743!5.36e-09!86;UBERON:0002204!1.17e-08!167;UBERON:0002619!2.07e-08!22;UBERON:0002346!2.33e-08!90;UBERON:0000178!7.21e-08!15;UBERON:0000179!7.21e-08!15;UBERON:0000463!7.21e-08!15;UBERON:0001950!2.01e-07!20;UBERON:0000073!2.51e-07!94;UBERON:0001016!2.51e-07!94;UBERON:0000956!9.89e-07!25;UBERON:0000203!9.89e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!5.18e-46!115;UBERON:0002390!1.84e-42!102;UBERON:0003061!1.84e-42!102;UBERON:0002193!5.31e-38!112;UBERON:0002371!2.44e-35!80;UBERON:0001474!7.13e-31!86;UBERON:0002405!1.69e-25!115;UBERON:0004765!9.11e-24!101;UBERON:0001434!9.11e-24!101;UBERON:0001049!1.54e-16!57;UBERON:0005068!1.54e-16!57;UBERON:0006241!1.54e-16!57;UBERON:0007135!1.54e-16!57;UBERON:0003080!4.45e-13!42;UBERON:0002780!9.77e-13!41;UBERON:0001890!9.77e-13!41;UBERON:0006240!9.77e-13!41;UBERON:0002616!1.85e-12!59;UBERON:0003081!1.10e-11!216;UBERON:0001893!2.12e-10!34;UBERON:0002020!2.30e-10!34;UBERON:0003528!2.30e-10!34;UBERON:0002791!4.85e-10!33;UBERON:0000955!8.97e-10!69;UBERON:0006238!8.97e-10!69;UBERON:0001017!1.44e-09!82;UBERON:0003075!1.98e-09!86;UBERON:0007284!1.98e-09!86;UBERON:0001869!2.68e-09!32;UBERON:0000479!4.21e-09!787;UBERON:0005743!5.36e-09!86;UBERON:0002204!1.17e-08!167;UBERON:0002619!2.07e-08!22;UBERON:0002346!2.33e-08!90;UBERON:0000178!7.21e-08!15;UBERON:0000179!7.21e-08!15;UBERON:0000463!7.21e-08!15;UBERON:0001950!2.01e-07!20;UBERON:0000073!2.51e-07!94;UBERON:0001016!2.51e-07!94;UBERON:0000956!9.89e-07!25;UBERON:0000203!9.89e-07!25 | ||
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| ||
|short_description=p1@PTAFR | |short_description=p1@PTAFR | ||
}} | }} |
Latest revision as of 09:54, 17 September 2015
Short description: | p1@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTAFR_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_uc001bpl.2_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.27e-55 | 72 |
myeloid cell | 4.37e-49 | 108 |
common myeloid progenitor | 4.37e-49 | 108 |
myeloid lineage restricted progenitor cell | 7.88e-48 | 66 |
hematopoietic stem cell | 1.33e-47 | 168 |
granulocyte monocyte progenitor cell | 1.18e-46 | 67 |
hematopoietic oligopotent progenitor cell | 1.29e-45 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-45 | 161 |
defensive cell | 6.94e-45 | 48 |
phagocyte | 6.94e-45 | 48 |
leukocyte | 1.16e-44 | 136 |
monopoietic cell | 3.84e-44 | 59 |
monocyte | 3.84e-44 | 59 |
monoblast | 3.84e-44 | 59 |
promonocyte | 3.84e-44 | 59 |
macrophage dendritic cell progenitor | 4.19e-43 | 61 |
hematopoietic cell | 6.35e-43 | 177 |
hematopoietic lineage restricted progenitor cell | 1.60e-39 | 120 |
classical monocyte | 2.29e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.29e-39 | 42 |
nongranular leukocyte | 1.24e-37 | 115 |
granulocyte | 9.35e-09 | 8 |
intermediate monocyte | 3.30e-08 | 9 |
CD14-positive, CD16-positive monocyte | 3.30e-08 | 9 |
macrophage | 8.51e-07 | 6 |