FFCP PHASE1:Hg19::chr6:30856449..30856505,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:30856449..30856505,+
|short_description=p6@DDR1
|description=CAGE_peak_6_at_DDR1_5end
|association_with_transcript=0bp_to_NM_001202521,NM_001202522,NM_0139...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=780 | |EntrezGene=780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2730 | |HGNC=2730 | ||
|TSSclassifier=strong | |||
|UniProt=Q08345,Q96T62,Q96T61 | |UniProt=Q08345,Q96T62,Q96T61 | ||
|association_with_transcript=0bp_to_NM_001202521,NM_001202522,NM_013994,uc003nrv.2,uc011dmu.1_5end | |||
|cluster_id=chr6:30856449..30856505,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_6_at_DDR1_5end | |||
|id=chr6:30856449..30856505,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.14e-11!43;CL:0000066!1.10e-09!254;CL:0000223!3.88e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.27e-15;42!CL:0002368;1.68e-11;13!CL:0002159;4.62e-08;14!CL:0000244;7.09e-08;4!CL:0000731;7.09e-08;4!CL:0002251;9.07e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.62e-18,42;CL:0002368,1.77e-11,13;CL:0000223,3.36e-11,58;CL:0002159,4.14e-08,14;CL:0000244,7.53e-08,4;CL:0000731,7.53e-08,4;CL:0002251,1.02e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.11e-07;82!CL:0000223;9.64e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.41e-23!82;UBERON:0005743!1.54e-23!86;UBERON:0001049!6.22e-23!57;UBERON:0005068!6.22e-23!57;UBERON:0006241!6.22e-23!57;UBERON:0007135!6.22e-23!57;UBERON:0004121!4.54e-22!169;UBERON:0000924!1.41e-21!173;UBERON:0006601!1.41e-21!173;UBERON:0000073!1.71e-21!94;UBERON:0001016!1.71e-21!94;UBERON:0000033!2.99e-21!123;UBERON:0000153!4.64e-21!129;UBERON:0007811!4.64e-21!129;UBERON:0002616!1.15e-20!59;UBERON:0000955!8.52e-20!69;UBERON:0006238!8.52e-20!69;UBERON:0000064!6.73e-18!219;UBERON:0003080!3.51e-17!42;UBERON:0007023!6.10e-17!115;UBERON:0003075!7.36e-17!86;UBERON:0007284!7.36e-17!86;UBERON:0002780!1.12e-16!41;UBERON:0001890!1.12e-16!41;UBERON:0006240!1.12e-16!41;UBERON:0002346!4.14e-16!90;UBERON:0002020!5.32e-16!34;UBERON:0003528!5.32e-16!34;UBERON:0001893!5.42e-16!34;UBERON:0000475!8.67e-16!365;UBERON:0002791!2.68e-15!33;UBERON:0003056!1.40e-14!61;UBERON:0001869!1.73e-14!32;UBERON:0000956!1.09e-10!25;UBERON:0000203!1.09e-10!25;UBERON:0004111!1.90e-10!241;UBERON:0000483!3.09e-10!309;UBERON:0000062!3.15e-10!511;UBERON:0000481!4.40e-10!347;UBERON:0002619!9.06e-10!22;UBERON:0000119!1.05e-09!312;UBERON:0000922!1.50e-09!612;UBERON:0000477!1.96e-09!286;UBERON:0000468!5.92e-09!659;UBERON:0001950!1.17e-08!20;UBERON:0000923!1.73e-08!604;UBERON:0005291!1.73e-08!604;UBERON:0006598!1.73e-08!604;UBERON:0002532!1.73e-08!604;UBERON:0002050!2.40e-08!605;UBERON:0005423!2.40e-08!605;UBERON:0000025!8.80e-08!194;UBERON:0002298!1.81e-07!8;UBERON:0002308!4.99e-07!9;UBERON:0000125!4.99e-07!9;UBERON:0003076!5.67e-07!15;UBERON:0003057!5.67e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.63e-24;34!UBERON:0003528;3.41e-22;34!UBERON:0002020;3.41e-22;34!UBERON:0002791;2.09e-21;32!UBERON:0001869;2.63e-21;32!UBERON:0002780;4.42e-20;41!UBERON:0001890;4.42e-20;41!UBERON:0000956;1.62e-19;25!UBERON:0000203;1.62e-19;25!UBERON:0000073;1.81e-19;53!UBERON:0002616;1.81e-19;53!UBERON:0002619;1.66e-18;22!UBERON:0001950;3.84e-16;20!UBERON:0001017;1.41e-12;75!UBERON:0000955;7.50e-12;68!UBERON:0002298;1.39e-11;6!UBERON:0001016;9.12e-10;83!UBERON:0000125;4.94e-09;9!UBERON:0002308;4.94e-09;9!UBERON:0004732;5.18e-08;13!UBERON:0000200;7.64e-07;6!UBERON:0003729;8.24e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.21e-37,56;UBERON:0005068,2.21e-37,56;UBERON:0006241,2.21e-37,56;UBERON:0007135,2.21e-37,56;UBERON:0000073,3.32e-33,53;UBERON:0002616,3.32e-33,53;UBERON:0001017,7.13e-32,81;UBERON:0001016,6.09e-29,89;UBERON:0010371,5.69e-28,104;UBERON:0002780,9.07e-28,41;UBERON:0001890,9.07e-28,41;UBERON:0003080,9.07e-28,41;UBERON:0006240,9.07e-28,41;UBERON:0003528,3.77e-27,34;UBERON:0002020,3.77e-27,34;UBERON:0001893,3.91e-27,34;UBERON:0000955,3.01e-26,68;UBERON:0006238,3.01e-26,68;UBERON:0003075,1.09e-25,82;UBERON:0007284,1.09e-25,82;UBERON:0004121,2.09e-24,171;UBERON:0000924,2.09e-24,171;UBERON:0006601,2.09e-24,171;UBERON:0002791,3.83e-24,32;UBERON:0001869,4.98e-24,32;UBERON:0002346,7.04e-24,86;UBERON:0003056,8.54e-20,61;UBERON:0000956,1.51e-19,25;UBERON:0000203,1.51e-19,25;UBERON:0002619,1.37e-18,22;UBERON:0007023,2.82e-18,114;UBERON:0011216,5.09e-18,223;UBERON:0001950,3.37e-16,20;UBERON:0010314,3.81e-16,132;UBERON:0002298,1.27e-11,6;UBERON:0003076,1.40e-10,15;UBERON:0003057,1.40e-10,15;UBERON:0004111,8.62e-10,240;UBERON:0000125,4.59e-09,9;UBERON:0002308,4.59e-09,9;UBERON:0004732,4.43e-08,13;UBERON:0002050,9.04e-08,564;UBERON:0000025,1.48e-07,192;UBERON:0005423,3.33e-07,581;UBERON:0000922,5.83e-07,592;UBERON:0000483,6.38e-07,306;UBERON:0000200,8.20e-07,6;UBERON:0003729,8.82e-07,13;UBERON:0004733,9.39e-07,12;UBERON:0002028,9.39e-07,12;UBERON:0007277,9.39e-07,12 | |||
|phase1_expression=1.09007027562334,1.2846031433459,1.69145284915165,3.00219895059391,2.68176656656373,0,0,0,0.261185628199839,0.737201809504527,1.39560233594486,0.655324116390517,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0.369363174230364,0,0.313454721478088,1.14494394852423,0.273748850145768,1.38096903554283,0,0,0,0,0,0,2.75826367343678,6.32532429434325,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0.378139268656271,0.443458794925128,0.175669571386252,1.5062593682237,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0.379891534993739,0.264818361626438,0.860509862246441,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0.163461903113459,0.302714855289863,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0,5.21804303540901,4.09119180886252,3.72845974005705,0.243947412259191,0.530119073285941,0.348581828608555,0.932949495138334,1.00928340350251,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.983907508344908,0.171567810298526,7.68251997860379,2.24803506515239,0.502644862058154,1.574003567695,0.325808305310325,0,0,0.927443239800615,0.234817388471643,0,0,0,0,0.858486162094873,0,0,0,1.87467667973554,4.87148171776693,3.40260233381728,0.53735113621709,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,1.52795370223311,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,1.19967589418468,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,3.81141936333695,0,0,1.00509759200609,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0,0.415941723061614,0.356857977594324,0,0.117141414992713,0.300946099727719,4.5481500811197,0,0,0.184369168541703,0.0868836144680828,1.17480694477644,0.343143423810856,0,0,0,0.606255142892519,0,1.20956117331872,0.744323423456331,0,0.280660094433074,1.02511319404561,0,0.321707842287215,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0,2.90062679019893,14.0354529212299,4.32780647998713,0,0.182091168006717,0.393373244878272,0.902399225814824,0.616122696835318,1.56869953835371,0,0.527758144464379,0,0,0,0,1.35473218771926,1.50506932156456,0.764628819135115,0.831076008928724,0.895499018888713,0,0,0,0.984043937099117,0.650756789328606,0.412164046590889,0.0915694648183434,0,8.03971753194641,7.15066270640173,0,0.386682873168488,0,0,0,0,0,0,0.356128142586949,6.44611169907815,5.38132188622297,2.04180339991335,3.2370489873776,0.464845549297286,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0.316379424718726,0.38126038784765,0,0.42793898803392,0.318203247925937,0.78494864019923,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,2.02066436723575,2.68120910214315,7.62236894029258,0.282431402330337,5.16606447205476,6.73885902670502,5.32116184244011,5.51336160496703,0,0,0,0,0,0.648473311192717,0,0,0.640944426764839,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,2.07875276582847,0,0,1.82870241333667,0.111308705022906,0,3.1668811219199,0,0.276283915531148,0.503865495708552,0.613612095012929,0.123084805461069,0,0,0.537063524026827,0,0.0986434056369336,0,0,6.78532922266653,5.65885398787293,0,1.30213880542617,0.699679999969566,1.44999915086959,3.64139034513599,0,0.472775363535873,0.344743373241465,0.291604613383254,0,0.885741385813839,0.844175070377856,0,0.774054819518572,1.47773809476774,1.09692698576986,0.21787692703798,1.39423744278603,0.846452843541768,0.113942055847001,0.46112780877612,3.14151755434202,0.325942115766024,1.91400695839152,1.37396390102793,3.19820865611181,0,0,0,0,0,0,0,0,0.843992258112108,0.326465616318295,0.706765357169704,0,0.995261931078505,0.796118080530053,0,0,0,0,18.7375149686282,0,10.3076356119149,0,0.19566461893209,0,0,0,1.22429104652196,0.126373159256976,0.150323419414493,0.103688191397247,0.664653872707185,0.330991955875499,0,0,0.284609546029793,0,0.173559738335131,1.27390116638691,0.34823682632161,1.04836000945218,0.171986032471617,0,0,0.164230914106418,1.93978032976839,0.0882561266915003,0.225980740780532,0.274083849293502,0,3.798647757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| ||
|short_description=p6@DDR1 | |||
}} | }} |
Latest revision as of 19:16, 17 September 2015
Short description: | p6@DDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DDR1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_NM_001202521, NM_001202522, NM_013994, uc003nrv.2, uc011dmu.1_5end |
EntrezGene: | DDR1 |
HGNC: | 2730 |
UniProt: | Q08345Q96T62Q96T61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.62e-18 | 42 |
respiratory epithelial cell | 1.77e-11 | 13 |
endodermal cell | 3.36e-11 | 58 |
general ecto-epithelial cell | 4.14e-08 | 14 |
transitional epithelial cell | 7.53e-08 | 4 |
urothelial cell | 7.53e-08 | 4 |
epithelial cell of alimentary canal | 1.02e-07 | 20 |