FFCP PHASE1:Hg19::chr5:36680616..36680631,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6507 | |EntrezGene=6507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10941 | |HGNC=10941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=167bp_to_ENST00000506178_5end | |association_with_transcript=167bp_to_ENST00000506178_5end | ||
|cluster_id=chr5:36680616..36680631,+ | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_12_at_SLC1A3_5end | |description=CAGE_peak_12_at_SLC1A3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.49e-09;2 | |ontology_enrichment_celltype_v019=CL:0000047;7.49e-09;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.95e-21;3!UBERON:0010122;4.70e-09;2 | |ontology_enrichment_development_v019=UBERON:0006215;2.95e-21;3!UBERON:0010122;4.70e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.16e-50!57;UBERON:0005068!3.16e-50!57;UBERON:0006241!3.16e-50!57;UBERON:0007135!3.16e-50!57;UBERON:0001017!2.39e-43!82;UBERON:0005743!1.13e-42!86;UBERON:0002616!5.68e-40!59;UBERON:0000073!3.00e-39!94;UBERON:0001016!3.00e-39!94;UBERON:0002780!1.91e-38!41;UBERON:0001890!1.91e-38!41;UBERON:0006240!1.91e-38!41;UBERON:0002020!3.26e-38!34;UBERON:0003528!3.26e-38!34;UBERON:0001893!7.29e-38!34;UBERON:0003080!2.45e-37!42;UBERON:0003075!9.85e-37!86;UBERON:0007284!9.85e-37!86;UBERON:0000955!2.91e-36!69;UBERON:0006238!2.91e-36!69;UBERON:0002791!3.37e-36!33;UBERON:0007023!3.44e-35!115;UBERON:0001869!1.22e-34!32;UBERON:0002346!1.50e-34!90;UBERON:0003056!1.22e-26!61;UBERON:0002619!1.56e-25!22;UBERON:0000956!9.38e-25!25;UBERON:0000203!9.38e-25!25;UBERON:0004121!1.37e-22!169;UBERON:0000924!9.62e-22!173;UBERON:0006601!9.62e-22!173;UBERON:0001950!1.33e-21!20;UBERON:0000033!2.32e-20!123;UBERON:0000153!6.97e-19!129;UBERON:0007811!6.97e-19!129;UBERON:0002308!2.51e-15!9;UBERON:0000125!2.51e-15!9;UBERON:0003076!1.39e-13!15;UBERON:0003057!1.39e-13!15;UBERON:0002420!2.86e-12!9;UBERON:0007245!2.86e-12!9;UBERON:0010009!2.86e-12!9;UBERON:0010011!2.86e-12!9;UBERON:0000454!2.86e-12!9;UBERON:0009663!9.14e-12!7;UBERON:0000062!2.12e-10!511;UBERON:0000369!5.47e-10!4;UBERON:0002435!5.47e-10!4;UBERON:0000204!5.47e-10!4;UBERON:0010082!5.47e-10!4;UBERON:0000200!6.09e-10!6;UBERON:0000025!8.27e-10!194;UBERON:0002298!2.04e-09!8;UBERON:0004733!1.71e-08!12;UBERON:0002028!1.71e-08!12;UBERON:0007277!1.71e-08!12;UBERON:0000064!1.72e-08!219;UBERON:0000467!1.79e-08!625;UBERON:0000480!2.00e-08!626;UBERON:0005383!2.47e-08!3;UBERON:0005382!2.47e-08!3;UBERON:0002771!3.19e-08!3;UBERON:0000468!4.92e-08!659;UBERON:0000349!6.14e-08!5;UBERON:0002240!8.01e-08!3;UBERON:0004732!9.55e-08!13;UBERON:0002021!1.37e-07!5;UBERON:0001871!1.84e-07!7;UBERON:0000477!1.93e-07!286;UBERON:0000922!2.00e-07!612;UBERON:0000923!3.10e-07!604;UBERON:0005291!3.10e-07!604;UBERON:0006598!3.10e-07!604;UBERON:0002532!3.10e-07!604;UBERON:0002050!3.44e-07!605;UBERON:0005423!3.44e-07!605;UBERON:0006331!4.45e-07!3;UBERON:0004111!5.42e-07!241;UBERON:0000988!5.87e-07!3;UBERON:0000483!7.12e-07!309 | |ontology_enrichment_uberon=UBERON:0001049!3.16e-50!57;UBERON:0005068!3.16e-50!57;UBERON:0006241!3.16e-50!57;UBERON:0007135!3.16e-50!57;UBERON:0001017!2.39e-43!82;UBERON:0005743!1.13e-42!86;UBERON:0002616!5.68e-40!59;UBERON:0000073!3.00e-39!94;UBERON:0001016!3.00e-39!94;UBERON:0002780!1.91e-38!41;UBERON:0001890!1.91e-38!41;UBERON:0006240!1.91e-38!41;UBERON:0002020!3.26e-38!34;UBERON:0003528!3.26e-38!34;UBERON:0001893!7.29e-38!34;UBERON:0003080!2.45e-37!42;UBERON:0003075!9.85e-37!86;UBERON:0007284!9.85e-37!86;UBERON:0000955!2.91e-36!69;UBERON:0006238!2.91e-36!69;UBERON:0002791!3.37e-36!33;UBERON:0007023!3.44e-35!115;UBERON:0001869!1.22e-34!32;UBERON:0002346!1.50e-34!90;UBERON:0003056!1.22e-26!61;UBERON:0002619!1.56e-25!22;UBERON:0000956!9.38e-25!25;UBERON:0000203!9.38e-25!25;UBERON:0004121!1.37e-22!169;UBERON:0000924!9.62e-22!173;UBERON:0006601!9.62e-22!173;UBERON:0001950!1.33e-21!20;UBERON:0000033!2.32e-20!123;UBERON:0000153!6.97e-19!129;UBERON:0007811!6.97e-19!129;UBERON:0002308!2.51e-15!9;UBERON:0000125!2.51e-15!9;UBERON:0003076!1.39e-13!15;UBERON:0003057!1.39e-13!15;UBERON:0002420!2.86e-12!9;UBERON:0007245!2.86e-12!9;UBERON:0010009!2.86e-12!9;UBERON:0010011!2.86e-12!9;UBERON:0000454!2.86e-12!9;UBERON:0009663!9.14e-12!7;UBERON:0000062!2.12e-10!511;UBERON:0000369!5.47e-10!4;UBERON:0002435!5.47e-10!4;UBERON:0000204!5.47e-10!4;UBERON:0010082!5.47e-10!4;UBERON:0000200!6.09e-10!6;UBERON:0000025!8.27e-10!194;UBERON:0002298!2.04e-09!8;UBERON:0004733!1.71e-08!12;UBERON:0002028!1.71e-08!12;UBERON:0007277!1.71e-08!12;UBERON:0000064!1.72e-08!219;UBERON:0000467!1.79e-08!625;UBERON:0000480!2.00e-08!626;UBERON:0005383!2.47e-08!3;UBERON:0005382!2.47e-08!3;UBERON:0002771!3.19e-08!3;UBERON:0000468!4.92e-08!659;UBERON:0000349!6.14e-08!5;UBERON:0002240!8.01e-08!3;UBERON:0004732!9.55e-08!13;UBERON:0002021!1.37e-07!5;UBERON:0001871!1.84e-07!7;UBERON:0000477!1.93e-07!286;UBERON:0000922!2.00e-07!612;UBERON:0000923!3.10e-07!604;UBERON:0005291!3.10e-07!604;UBERON:0006598!3.10e-07!604;UBERON:0002532!3.10e-07!604;UBERON:0002050!3.44e-07!605;UBERON:0005423!3.44e-07!605;UBERON:0006331!4.45e-07!3;UBERON:0004111!5.42e-07!241;UBERON:0000988!5.87e-07!3;UBERON:0000483!7.12e-07!309 | ||
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|short_description=p12@SLC1A3 | |short_description=p12@SLC1A3 | ||
}} | }} |
Latest revision as of 19:35, 17 September 2015
Short description: | p12@SLC1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC1A3_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 167bp_to_ENST00000506178_5end |
EntrezGene: | SLC1A3 |
HGNC: | 10941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data