FFCP PHASE1:Hg19::chr12:24097201..24097216,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6660 | |EntrezGene=6660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11201 | |HGNC=11201 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWL1 | |UniProt=F5GWL1 | ||
|association_with_transcript=69bp_to_ENST00000538083_5end | |association_with_transcript=69bp_to_ENST00000538083_5end | ||
|cluster_id=chr12:24097201..24097216,- | |||
|coexpression_cluster_id=C3267 | |coexpression_cluster_id=C3267 | ||
|description=CAGE_peak_10_at_SOX5_5end | |description=CAGE_peak_10_at_SOX5_5end | ||
|id=chr12:24097201..24097216,- | |id=chr12:24097201..24097216,- | ||
|ontology_enrichment_celltype=CL:0000667!2.61e-09!6;CL:0000058!2.61e-09!6;CL:0000138!2.61e-09!6 | |ontology_enrichment_celltype=CL:0000667!2.61e-09!6;CL:0000058!2.61e-09!6;CL:0000138!2.61e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000138;3.75e-11;6!CL:0000047;5.71e-09;2!CL:0000153;9.84e-08;9!CL:0000447;9.84e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,3.06e-11,6;CL:0000138,3.06e-11,6;CL:0000153,8.60e-08,9;CL:0000447,8.60e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.31e-16;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;5.71e-09;2!DOID:4236;5.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,3.71e-09,2;DOID:4236,3.71e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;2.73e-18;20!UBERON:0002619;1.04e-16;22!UBERON:0002022;1.31e-16;1!UBERON:0000941;1.31e-16;1!UBERON:0001785;1.31e-16;1!UBERON:0002464;1.31e-16;1!UBERON:0004904;1.31e-16;1!UBERON:0001021;1.31e-16;1!UBERON:0000956;8.65e-15;25!UBERON:0000203;8.65e-15;25!UBERON:0001872;3.43e-13;5!UBERON:0002791;7.29e-11;32!UBERON:0001869;1.16e-10;32!UBERON:0003528;7.36e-10;34!UBERON:0002020;7.36e-10;34!UBERON:0003714;5.71e-09;2!UBERON:0005162;5.71e-09;2!UBERON:0000122;5.71e-09;2!UBERON:0001893;6.70e-09;34!UBERON:0000073;8.79e-09;53!UBERON:0002616;8.79e-09;53!UBERON:0002780;3.10e-08;41!UBERON:0001890;3.10e-08;41!UBERON:0001016;6.16e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.16e-18,20;UBERON:0002022,6.47e-17,1;UBERON:0002619,1.19e-16,22;UBERON:0000941,1.21e-16,1;UBERON:0001785,1.21e-16,1;UBERON:0002464,1.21e-16,1;UBERON:0004904,1.21e-16,1;UBERON:0001021,1.21e-16,1;UBERON:0003902,1.21e-16,1;UBERON:0005425,1.21e-16,1;UBERON:0000956,9.73e-15,25;UBERON:0000203,9.73e-15,25;UBERON:0001872,5.27e-13,5;UBERON:0002791,1.27e-11,32;UBERON:0001869,1.27e-11,32;UBERON:0003528,5.87e-11,34;UBERON:0002020,5.87e-11,34;UBERON:0001893,5.87e-11,34;UBERON:0001016,5.82e-10,89;UBERON:0000073,6.24e-10,53;UBERON:0002616,6.24e-10,53;UBERON:0001049,2.14e-09,56;UBERON:0005068,2.14e-09,56;UBERON:0006241,2.14e-09,56;UBERON:0007135,2.14e-09,56;UBERON:0002780,3.94e-09,41;UBERON:0001890,3.94e-09,41;UBERON:0003080,3.94e-09,41;UBERON:0006240,3.94e-09,41;UBERON:0003714,5.49e-09,2;UBERON:0005162,5.49e-09,2;UBERON:0000122,5.49e-09,2;UBERON:0003056,1.19e-08,61;UBERON:0003075,1.52e-08,82;UBERON:0007284,1.52e-08,82;UBERON:0001017,1.54e-08,81;UBERON:0002346,3.96e-08,86;UBERON:0000955,1.34e-07,68;UBERON:0006238,1.34e-07,68 | |||
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|short_description=p10@SOX5 | |short_description=p10@SOX5 | ||
}} | }} |
Latest revision as of 20:56, 17 September 2015
Short description: | p10@SOX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SOX5_5end |
Coexpression cluster: | C3267_temporal_parietal_duodenum_Chondrocyte_colon_occipital_Neural |
Association with transcript: | 69bp_to_ENST00000538083_5end |
EntrezGene: | SOX5 |
HGNC: | 11201 |
UniProt: | F5GWL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 3.06e-11 | 6 |
chondrocyte | 3.06e-11 | 6 |
GAG secreting cell | 8.60e-08 | 9 |
carbohydrate secreting cell | 8.60e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 3.71e-09 | 2 |
carcinosarcoma | 3.71e-09 | 2 |