FFCP PHASE1:Hg19::chr6:31582990..31583096,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:31582990..31583096,+ to FFCP PHASE1:Hg19::chr6:31582990..31583096,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=199 | |EntrezGene=199 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=352 | |HGNC=352 | ||
|TSSclassifier=strong | |||
|UniProt=P55008,Q4V347,O43904 | |UniProt=P55008,Q4V347,O43904 | ||
|association_with_transcript=0bp_to_ENST00000337917,ENST00000466820,ENST00000497362,NM_001623,NM_004847,uc003nuy.2,uc010jsy.2_5end | |||
|cluster_id=chr6:31582990..31583096,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_1_at_AIF1_5end | |||
|id=chr6:31582990..31583096,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.68e-58!172;CL:0000566!4.68e-58!172;CL:0000763!7.09e-55!112;CL:0000049!7.09e-55!112;CL:0002032!7.46e-54!165;CL:0000837!7.46e-54!165;CL:0000988!2.04e-51!182;CL:0000738!1.19e-46!140;CL:0000766!3.33e-44!76;CL:0000557!3.71e-39!71;CL:0002009!7.93e-39!65;CL:0000839!1.40e-37!70;CL:0002194!1.86e-37!63;CL:0000576!1.86e-37!63;CL:0000040!1.86e-37!63;CL:0000559!1.86e-37!63;CL:0002031!1.64e-36!124;CL:0002087!2.53e-36!119;CL:0002057!1.03e-33!42;CL:0000860!6.62e-30!45;CL:0002393!6.03e-09!9;CL:0002397!6.03e-09!9;CL:0000094!9.41e-08!8;CL:0000134!1.29e-07!358;CL:0002320!9.44e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000576;8.65e-26;48!CL:0000473;1.56e-25;39!CL:0000234;1.56e-25;39!CL:0000860;2.13e-25;33!CL:0002057;2.13e-25;33!CL:0000766;5.24e-22;69!CL:0000763;2.25e-18;100!CL:0002087;2.18e-10;104!CL:0000738;3.27e-10;136!CL:0000988;5.42e-09;177!CL:0000094;3.32e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.90e-62,108;CL:0000049,2.90e-62,108;CL:0000037,1.57e-56,168;CL:0002032,6.68e-53,161;CL:0000837,6.68e-53,161;CL:0000766,2.64e-52,72;CL:0000988,7.43e-51,177;CL:0000557,1.05e-46,67;CL:0002009,1.14e-46,61;CL:0000738,3.43e-45,136;CL:0002194,3.46e-45,59;CL:0000576,3.46e-45,59;CL:0000040,3.46e-45,59;CL:0000559,3.46e-45,59;CL:0000839,6.43e-45,66;CL:0000473,2.85e-41,48;CL:0000234,2.85e-41,48;CL:0000860,4.58e-36,42;CL:0002057,4.58e-36,42;CL:0002031,2.49e-35,120;CL:0002087,4.19e-35,115;CL:0002393,1.75e-09,9;CL:0002397,1.75e-09,9;CL:0000094,3.32e-08,8;CL:0000134,1.31e-07,354;CL:0002320,8.31e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.09e-26;42!CL:0000049;2.04e-17;108 | |||
|ontology_enrichment_disease=DOID:8692!1.28e-10!31;DOID:1240!2.07e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.06e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.08e-10,31;DOID:1240,3.08e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.81e-43!115;UBERON:0002390!1.31e-40!102;UBERON:0003061!1.31e-40!102;UBERON:0002193!8.45e-36!112;UBERON:0002371!2.53e-33!80;UBERON:0001474!9.18e-29!86;UBERON:0002405!1.83e-25!115;UBERON:0004765!2.20e-21!101;UBERON:0001434!2.20e-21!101;UBERON:0001049!4.11e-15!57;UBERON:0005068!4.11e-15!57;UBERON:0006241!4.11e-15!57;UBERON:0007135!4.11e-15!57;UBERON:0003080!1.17e-12!42;UBERON:0002780!1.66e-12!41;UBERON:0001890!1.66e-12!41;UBERON:0006240!1.66e-12!41;UBERON:0002616!2.61e-11!59;UBERON:0001017!5.94e-11!82;UBERON:0005743!3.08e-10!86;UBERON:0001893!3.17e-10!34;UBERON:0002020!3.75e-10!34;UBERON:0003528!3.75e-10!34;UBERON:0002791!6.69e-10!33;UBERON:0003081!1.05e-09!216;UBERON:0000955!2.60e-09!69;UBERON:0006238!2.60e-09!69;UBERON:0001869!3.00e-09!32;UBERON:0000073!9.52e-09!94;UBERON:0001016!9.52e-09!94;UBERON:0002619!1.58e-08!22;UBERON:0000479!2.74e-08!787;UBERON:0003075!3.52e-08!86;UBERON:0007284!3.52e-08!86;UBERON:0001950!1.05e-07!20;UBERON:0002346!3.93e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.60e-12;114!UBERON:0002780;3.59e-10;41!UBERON:0001890;3.59e-10;41!UBERON:0001893;2.38e-09;34!UBERON:0003528;3.03e-09;34!UBERON:0002020;3.03e-09;34!UBERON:0002791;4.10e-09;32!UBERON:0000073;4.41e-09;53!UBERON:0002616;4.41e-09;53!UBERON:0002619;4.86e-09;22!UBERON:0001869;5.73e-09;32!UBERON:0001950;3.70e-08;20!UBERON:0000956;3.22e-07;25!UBERON:0000203;3.22e-07;25!UBERON:0000178;4.59e-07;15!UBERON:0000179;4.59e-07;15!UBERON:0000463;4.59e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.43e-46,98;UBERON:0003061,3.43e-46,98;UBERON:0007023,1.34e-45,114;UBERON:0002193,5.04e-41,108;UBERON:0002371,5.74e-40,76;UBERON:0001474,8.66e-35,82;UBERON:0002405,1.64e-34,93;UBERON:0004765,4.85e-29,90;UBERON:0001434,9.88e-25,100;UBERON:0001049,3.37e-16,56;UBERON:0005068,3.37e-16,56;UBERON:0006241,3.37e-16,56;UBERON:0007135,3.37e-16,56;UBERON:0000073,8.27e-15,53;UBERON:0002616,8.27e-15,53;UBERON:0003081,6.60e-14,203;UBERON:0002780,1.91e-13,41;UBERON:0001890,1.91e-13,41;UBERON:0003080,1.91e-13,41;UBERON:0006240,1.91e-13,41;UBERON:0000479,1.29e-11,773;UBERON:0001893,5.39e-11,34;UBERON:0003528,6.47e-11,34;UBERON:0002020,6.47e-11,34;UBERON:0002791,4.06e-10,32;UBERON:0001017,4.49e-10,81;UBERON:0001869,6.06e-10,32;UBERON:0000955,6.95e-10,68;UBERON:0006238,6.95e-10,68;UBERON:0003075,2.74e-09,82;UBERON:0007284,2.74e-09,82;UBERON:0002619,4.90e-09,22;UBERON:0002204,2.12e-08,167;UBERON:0001016,2.38e-08,89;UBERON:0002346,3.57e-08,86;UBERON:0001950,3.72e-08,20;UBERON:0000956,3.25e-07,25;UBERON:0000203,3.25e-07,25;UBERON:0000178,4.55e-07,15;UBERON:0000179,4.55e-07,15;UBERON:0000463,4.55e-07,15;UBERON:0003056,7.52e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74022690387308,0,0,0,0,0,0,0,0,0,2.36881557818649,1.06730766284929,1.18066171970519,1180.87955910041,520.856493217918,936.482729938944,0,0,0,0.619737604642413,0.426507697462265,61.0688913816482,715.762067823186,471.078907107363,412.320654360118,848.863562843553,587.543110158429,909.499329316313,406.097280911324,383.92195878783,425.249859262242,376.302610750303,350.315040594596,541.676442695536,587.180172729509,537.937483711111,1165.85739335073,472.991073970641,434.411192051915,563.374184232462,416.580297407784,445.655743044462,837.54442652683,454.228496278419,601.420996740599,481.420855726678,524.133715996692,542.940076046082,609.07516851122,531.953534406195,374.474248296152,414.176795582057,512.044779793243,592.926078243769,1257.74059968733,384.428684172189,619.074706095096,780.396247429221,3451.06635719188,2966.04258881232,3833.18901582964,1245.83684804578,1271.24739790335,1466.29952743746,4259.51545521296,3684.33469508155,4262.46802809773,0,18.5687127829125,3.55803701545422,72.9708680588727,6.80673177961221,21.8405927182704,28.4249295297491,16.2189138271012,4.55370375287559,7.6340834618222,3.05818582500183,29.0776922873857,104.815101277547,60.8417235830428,2.360517241366,0.393010762749165,5.34563897398724,0,0,0.946895611469467,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0.289803085735052,0.296573126324121,0.535081656179426,0,0,0.383220493601921,1.03088233644789,0.506039384039006,21.3438827597145,4.55758417699493,3.8018081777935,96.3680762097746,47.099072904826,74.9584359314075,96.8418960860029,20.5281999230262,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,1.75669571386252,29.6012710624831,0,0,21.0955805875544,18.9801413656201,88.6829596660831,73.6936029103507,107.535043226664,58.6902852100713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1287.49467835034,1904.00109696828,0,0,0,0.132409180813219,0,11.3493882303474,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,0,6.33775174109154,33.4161253670393,31.9026549607958,0.882926198829301,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1135.30661506899,264.892828137617,639.857153652975,0,0,0,0,0,0,5.91195885475132,3.25779205848936,2.90259361757081,7.20599767084807,3.40854570251226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,684.741885009902,820.688087400095,674.668606345701,0,0,0,0,0,0,0,25.8110295864525,1.2937654491571,24.3851768931522,0,1.30139853857622,0.773288812777695,10.8885572467327,0.637938751653163,513.818818427767,245.3123965473,608.776389237536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,402.990882913508,394.54127329725,226.689332774516,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,1.3071772551245,0,0,0,52.3448339170429,0,0,0,0,0,0,0,0,0,0,0,1.36362603865761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.196469961995,0,0,0,0,0,1.05553817648832,0,0,0,0,8.04362730642945,0,57.4277184738353,0,0,0,0,437.927286767362,384.612515192615,327.547132625143,356.871199635768,415.475895817056,397.514139761136,412.58401804992,314.077569812531,1.28188885352968,0.962479855263359,0,2.9728508020115,0.144269212976445,0.0711418433484141,0.318852545457645,18.7604609146848,229.231928048443,65.8304842271276,13.3094995512568,99.9637954083913,28.7575695581822,25.2254632194567,295.748682966279,131.709003129647,69.6952245950056,55.8985188919202,100.925558332607,302.284703385073,128.426639480935,171.559574753483,148.328886981887,83.8214929274753,0,4.92349595790849,46.7888323763451,12.989806751915,7.04935025439248,0,49.3732564146283,0,0,0,1.67121139316383,20.4905629774521,0,32.8068723762878,64.1452538831938,0,0,0,23.5112626136262,33.9829216103312,0,0.102268682502155,0.246169610922139,0,0,0,62.4118291676784,23.3784871359533,316.117681897961,0,13.5706584453331,52.8778159522552,3.99227596002388,0,0,6.52499617891314,0,0,0,0,0,0,23.9150174169737,51.7358721703,3.05163472634166,6.7453348558047,10.0486190444206,20.8416127296274,0,0,20.1609677279948,0,0,1.07709173291727,0,11.4840417503491,1.83195186803725,33.581190889174,0,8.00599307614626,43.0488256121405,0.902382642468723,1.56850027454192,1.00692952185506,0,4.29128763247022,0,0,0.706765357169704,0,5.97157158647103,29.1025387215986,22.6081153625441,0,0,0,79.5333369171989,18.4592858878721,54.1150869625533,0,0,0,3.15667522279512,24.1981432097328,7.34574627913176,300.957678770488,0,0,0,0,0,0,0,0,0,0,0,40.361860363909,0,0,0,0,18.039957066846,0,18.3044400032231,0,0,27.4768854448514,0,0,14.3013506475366,0,0,0,0,0,0,0,0,0,0,0,26.4184927032307,118.423152741574,8.94226116468806,0,0,17.594791280152,16.7287109528529,12.2038414178058,8.78587602195561,11.5891032996874,22.0939742867454,16.7958681216816,0,0,0,0.0824158583811665,0,0,0,31.0139579025628,44.6747172045968,0,0.137539436597234,0.415440338029185,384.255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| 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| ||
|short_description=p1@AIF1 | |||
}} | }} |
Latest revision as of 22:13, 17 September 2015
Short description: | p1@AIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AIF1_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 0bp_to_ENST00000337917, ENST00000466820, ENST00000497362, NM_001623, NM_004847, uc003nuy.2, uc010jsy.2_5end |
EntrezGene: | AIF1 |
HGNC: | 352 |
UniProt: | P55008Q4V347O43904 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.90e-62 | 108 |
common myeloid progenitor | 2.90e-62 | 108 |
hematopoietic stem cell | 1.57e-56 | 168 |
hematopoietic oligopotent progenitor cell | 6.68e-53 | 161 |
hematopoietic multipotent progenitor cell | 6.68e-53 | 161 |
myeloid leukocyte | 2.64e-52 | 72 |
hematopoietic cell | 7.43e-51 | 177 |
granulocyte monocyte progenitor cell | 1.05e-46 | 67 |
macrophage dendritic cell progenitor | 1.14e-46 | 61 |
leukocyte | 3.43e-45 | 136 |
monopoietic cell | 3.46e-45 | 59 |
monocyte | 3.46e-45 | 59 |
monoblast | 3.46e-45 | 59 |
promonocyte | 3.46e-45 | 59 |
myeloid lineage restricted progenitor cell | 6.43e-45 | 66 |
defensive cell | 2.85e-41 | 48 |
phagocyte | 2.85e-41 | 48 |
classical monocyte | 4.58e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.58e-36 | 42 |
hematopoietic lineage restricted progenitor cell | 2.49e-35 | 120 |
nongranular leukocyte | 4.19e-35 | 115 |
intermediate monocyte | 1.75e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.75e-09 | 9 |
granulocyte | 3.32e-08 | 8 |
mesenchymal cell | 1.31e-07 | 354 |
connective tissue cell | 8.31e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.08e-10 | 31 |
leukemia | 3.08e-07 | 39 |