FFCP PHASE1:Hg19::chr5:5140436..5140450,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170690 | |EntrezGene=170690 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17108 | |HGNC=17108 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TE57,Q2XQZ0,F5H441 | |UniProt=Q8TE57,Q2XQZ0,F5H441 | ||
|association_with_transcript=0bp_to_ENST00000274181,ENST00000511368,ENST00000536857,NM_139056,uc003jdj.1,uc003jdk.1,uc003jdl.2_5end | |association_with_transcript=0bp_to_ENST00000274181,ENST00000511368,ENST00000536857,NM_139056,uc003jdj.1,uc003jdk.1,uc003jdl.2_5end | ||
|cluster_id=chr5:5140436..5140450,+ | |||
|coexpression_cluster_id=C2822 | |coexpression_cluster_id=C2822 | ||
|description=CAGE_peak_2_at_ADAMTS16_5end | |description=CAGE_peak_2_at_ADAMTS16_5end | ||
|id=chr5:5140436..5140450,+ | |id=chr5:5140436..5140450,+ | ||
|ontology_enrichment_celltype=CL:0000047!1.45e-12!8;CL:0002319!2.99e-11!25;CL:0000128!4.32e-11!7;CL:0000126!4.32e-11!7;CL:0000127!4.32e-11!7;CL:0002453!4.32e-11!7;CL:0000540!1.45e-09!6;CL:0000031!1.45e-09!6;CL:0000404!1.45e-09!6;CL:0002322!1.55e-08!5;CL:0000133!5.86e-07!59 | |ontology_enrichment_celltype=CL:0000047!1.45e-12!8;CL:0002319!2.99e-11!25;CL:0000128!4.32e-11!7;CL:0000126!4.32e-11!7;CL:0000127!4.32e-11!7;CL:0002453!4.32e-11!7;CL:0000540!1.45e-09!6;CL:0000031!1.45e-09!6;CL:0000404!1.45e-09!6;CL:0002322!1.55e-08!5;CL:0000133!5.86e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.16e-20;25!CL:0000128;4.42e-19;7!CL:0000126;4.42e-19;7!CL:0000127;4.42e-19;7!CL:0002322;4.75e-18;5!CL:0000540;5.89e-15;6!CL:0000404;5.89e-15;6!CL:0002605;3.66e-12;3!CL:0000047;7.65e-09;2!CL:0002321;3.44e-08;15!CL:0000039;6.77e-08;7!CL:0000586;6.77e-08;7!CL:0000243;2.11e-07;15!CL:0000125;2.11e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.76e-22,8;CL:0002319,2.36e-20,25;CL:0000128,4.12e-19,7;CL:0000126,4.12e-19,7;CL:0000127,4.12e-19,7;CL:0002453,4.12e-19,7;CL:0002322,5.12e-18,5;CL:0000540,7.35e-15,6;CL:0000031,7.35e-15,6;CL:0000404,7.35e-15,6;CL:0000133,3.57e-13,59;CL:0002605,3.67e-12,3;CL:0000221,3.94e-10,72;CL:0000039,6.54e-08,7;CL:0000586,6.54e-08,7;CL:0000243,2.06e-07,15;CL:0000125,2.06e-07,15;CL:0000030,2.06e-07,15;CL:0000339,2.06e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000031;5.89e-15;6!UBERON:0006215;7.02e-12;3!CL:0000133;6.79e-09;59!UBERON:0009117;2.65e-08;10!UBERON:0005564;2.65e-08;10!CL:0000339;2.11e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.39e-36!86;UBERON:0001017!1.66e-34!82;UBERON:0000073!3.33e-31!94;UBERON:0001016!3.33e-31!94;UBERON:0001049!6.71e-26!57;UBERON:0005068!6.71e-26!57;UBERON:0006241!6.71e-26!57;UBERON:0007135!6.71e-26!57;UBERON:0002616!2.33e-24!59;UBERON:0000955!4.74e-24!69;UBERON:0006238!4.74e-24!69;UBERON:0002346!5.52e-23!90;UBERON:0007023!1.22e-22!115;UBERON:0003075!1.98e-22!86;UBERON:0007284!1.98e-22!86;UBERON:0001893!5.08e-22!34;UBERON:0002020!1.36e-21!34;UBERON:0003528!1.36e-21!34;UBERON:0000956!2.90e-21!25;UBERON:0000203!2.90e-21!25;UBERON:0002791!6.85e-21!33;UBERON:0001869!1.44e-20!32;UBERON:0002619!3.33e-17!22;UBERON:0002780!7.03e-17!41;UBERON:0001890!7.03e-17!41;UBERON:0006240!7.03e-17!41;UBERON:0003080!2.75e-16!42;UBERON:0000153!9.91e-16!129;UBERON:0007811!9.91e-16!129;UBERON:0003056!1.05e-15!61;UBERON:0000924!1.36e-15!173;UBERON:0006601!1.36e-15!173;UBERON:0001950!3.04e-15!20;UBERON:0004121!5.58e-15!169;UBERON:0000033!1.06e-14!123;UBERON:0004733!3.17e-12!12;UBERON:0002028!3.17e-12!12;UBERON:0007277!3.17e-12!12;UBERON:0002680!8.88e-12!9;UBERON:0001895!8.88e-12!9;UBERON:0010092!8.88e-12!9;UBERON:0003076!2.70e-11!15;UBERON:0003057!2.70e-11!15;UBERON:0004732!4.69e-11!13;UBERON:0002037!1.60e-09!6;UBERON:0006215!1.60e-09!6;UBERON:0000200!9.60e-08!6;UBERON:0000922!2.94e-07!612 | |ontology_enrichment_uberon=UBERON:0005743!2.39e-36!86;UBERON:0001017!1.66e-34!82;UBERON:0000073!3.33e-31!94;UBERON:0001016!3.33e-31!94;UBERON:0001049!6.71e-26!57;UBERON:0005068!6.71e-26!57;UBERON:0006241!6.71e-26!57;UBERON:0007135!6.71e-26!57;UBERON:0002616!2.33e-24!59;UBERON:0000955!4.74e-24!69;UBERON:0006238!4.74e-24!69;UBERON:0002346!5.52e-23!90;UBERON:0007023!1.22e-22!115;UBERON:0003075!1.98e-22!86;UBERON:0007284!1.98e-22!86;UBERON:0001893!5.08e-22!34;UBERON:0002020!1.36e-21!34;UBERON:0003528!1.36e-21!34;UBERON:0000956!2.90e-21!25;UBERON:0000203!2.90e-21!25;UBERON:0002791!6.85e-21!33;UBERON:0001869!1.44e-20!32;UBERON:0002619!3.33e-17!22;UBERON:0002780!7.03e-17!41;UBERON:0001890!7.03e-17!41;UBERON:0006240!7.03e-17!41;UBERON:0003080!2.75e-16!42;UBERON:0000153!9.91e-16!129;UBERON:0007811!9.91e-16!129;UBERON:0003056!1.05e-15!61;UBERON:0000924!1.36e-15!173;UBERON:0006601!1.36e-15!173;UBERON:0001950!3.04e-15!20;UBERON:0004121!5.58e-15!169;UBERON:0000033!1.06e-14!123;UBERON:0004733!3.17e-12!12;UBERON:0002028!3.17e-12!12;UBERON:0007277!3.17e-12!12;UBERON:0002680!8.88e-12!9;UBERON:0001895!8.88e-12!9;UBERON:0010092!8.88e-12!9;UBERON:0003076!2.70e-11!15;UBERON:0003057!2.70e-11!15;UBERON:0004732!4.69e-11!13;UBERON:0002037!1.60e-09!6;UBERON:0006215!1.60e-09!6;UBERON:0000200!9.60e-08!6;UBERON:0000922!2.94e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.67e-15;6!UBERON:0000922;2.76e-15;49!UBERON:0001869;9.62e-12;32!UBERON:0000956;2.83e-11;25!UBERON:0000203;2.83e-11;25!UBERON:0002680;3.30e-10;9!UBERON:0001895;3.30e-10;9!UBERON:0001893;5.78e-10;34!UBERON:0002791;9.63e-10;32!UBERON:0000073;3.37e-09;53!UBERON:0002616;3.37e-09;53!UBERON:0003528;1.38e-08;34!UBERON:0002020;1.38e-08;34!UBERON:0001017;1.61e-08;75!UBERON:0003135;1.45e-07;11!UBERON:0004733;1.49e-07;12!UBERON:0002028;1.49e-07;12!UBERON:0001016;2.05e-07;83!UBERON:0000955;3.97e-07;68!UBERON:0002780;4.57e-07;41!UBERON:0001890;4.57e-07;41!UBERON:0004732;6.10e-07;13!UBERON:0000473;6.52e-07;8!UBERON:0001950;9.20e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.55e-26,81;UBERON:0001016,8.29e-23,89;UBERON:0002037,1.61e-15,6;UBERON:0006215,1.61e-15,6;UBERON:0001049,2.62e-15,56;UBERON:0005068,2.62e-15,56;UBERON:0006241,2.62e-15,56;UBERON:0007135,2.62e-15,56;UBERON:0000073,2.04e-14,53;UBERON:0002616,2.04e-14,53;UBERON:0000955,3.30e-13,68;UBERON:0006238,3.30e-13,68;UBERON:0001869,3.87e-12,32;UBERON:0001893,2.67e-11,34;UBERON:0000956,3.99e-11,25;UBERON:0000203,3.99e-11,25;UBERON:0004121,1.30e-10,171;UBERON:0000924,1.30e-10,171;UBERON:0006601,1.30e-10,171;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002680,3.22e-10,9;UBERON:0001895,3.22e-10,9;UBERON:0010092,3.22e-10,9;UBERON:0002791,3.70e-10,32;UBERON:0002346,1.04e-09,86;UBERON:0003528,1.89e-09,34;UBERON:0002020,1.89e-09,34;UBERON:0011216,2.35e-09,223;UBERON:0002780,5.35e-09,41;UBERON:0001890,5.35e-09,41;UBERON:0003080,5.35e-09,41;UBERON:0006240,5.35e-09,41;UBERON:0003076,2.48e-08,15;UBERON:0003057,2.48e-08,15;UBERON:0004733,1.46e-07,12;UBERON:0002028,1.46e-07,12;UBERON:0007277,1.46e-07,12;UBERON:0003135,1.47e-07,11;UBERON:0010371,2.62e-07,104;UBERON:0004732,6.00e-07,13;UBERON:0000473,6.33e-07,8 | |||
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|short_description=p2@ADAMTS16 | |short_description=p2@ADAMTS16 | ||
}} | }} |
Latest revision as of 02:07, 18 September 2015
Short description: | p2@ADAMTS16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ADAMTS16_5end |
Coexpression cluster: | C2822_Neural_Astrocyte_kidney_mesodermal_H9_cerebellum_Neurons |
Association with transcript: | 0bp_to_ENST00000274181, ENST00000511368, ENST00000536857, NM_139056, uc003jdj.1, uc003jdk.1, uc003jdl.2_5end |
EntrezGene: | ADAMTS16 |
HGNC: | 17108 |
UniProt: | Q8TE57Q2XQZ0F5H441 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.76e-22 | 8 |
neural cell | 2.36e-20 | 25 |
oligodendrocyte | 4.12e-19 | 7 |
macroglial cell | 4.12e-19 | 7 |
astrocyte | 4.12e-19 | 7 |
oligodendrocyte precursor cell | 4.12e-19 | 7 |
embryonic stem cell | 5.12e-18 | 5 |
neuron | 7.35e-15 | 6 |
neuroblast | 7.35e-15 | 6 |
electrically signaling cell | 7.35e-15 | 6 |
neurectodermal cell | 3.57e-13 | 59 |
astrocyte of the cerebral cortex | 3.67e-12 | 3 |
ectodermal cell | 3.94e-10 | 72 |
germ line cell | 6.54e-08 | 7 |
germ cell | 6.54e-08 | 7 |
glial cell (sensu Vertebrata) | 2.06e-07 | 15 |
glial cell | 2.06e-07 | 15 |
glioblast | 2.06e-07 | 15 |
glioblast (sensu Vertebrata) | 2.06e-07 | 15 |