FFCP PHASE1:Hg19::chr5:57877973..57878025,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115827 | |EntrezGene=115827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30269 | |HGNC=30269 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000513316_5end | |association_with_transcript=-22bp_to_ENST00000513316_5end | ||
|cluster_id=chr5:57877973..57878025,+ | |||
|coexpression_cluster_id=C4507 | |||
|description=CAGE_peak_2_at_RAB3C_5end | |description=CAGE_peak_2_at_RAB3C_5end | ||
|id=chr5:57877973..57878025,+ | |id=chr5:57877973..57878025,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.46e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;4.17e-25;41!UBERON:0001890;4.17e-25;41!UBERON:0003528;4.39e-24;34!UBERON:0002020;4.39e-24;34!UBERON:0001869;8.27e-24;32!UBERON:0002791;1.54e-23;32!UBERON:0002619;1.82e-23;22!UBERON:0001893;2.07e-23;34!UBERON:0000073;2.12e-22;53!UBERON:0002616;2.12e-22;53!UBERON:0001950;1.55e-21;20!UBERON:0000956;1.07e-19;25!UBERON:0000203;1.07e-19;25!UBERON:0007023;1.23e-18;114!UBERON:0000955;7.51e-16;68!UBERON:0001017;4.87e-15;75!UBERON:0001016;3.25e-14;83!UBERON:0000125;4.41e-10;9!UBERON:0002308;4.41e-10;9!UBERON:0002420;7.42e-10;9!UBERON:0007245;7.42e-10;9!UBERON:0010009;7.42e-10;9!UBERON:0010011;7.42e-10;9!UBERON:0000454;7.42e-10;9!UBERON:0001894;1.07e-08;7!UBERON:0001871;3.15e-08;6!UBERON:0009663;7.81e-08;7!UBERON:0002298;2.27e-07;6!UBERON:0000200;2.59e-07;6!UBERON:0004732;4.28e-07;13!UBERON:0011216;6.72e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.67e-72,114;UBERON:0001049,1.10e-42,56;UBERON:0005068,1.10e-42,56;UBERON:0006241,1.10e-42,56;UBERON:0007135,1.10e-42,56;UBERON:0000073,8.98e-40,53;UBERON:0002616,8.98e-40,53;UBERON:0001017,2.63e-37,81;UBERON:0001016,5.13e-37,89;UBERON:0002780,8.25e-35,41;UBERON:0001890,8.25e-35,41;UBERON:0003080,8.25e-35,41;UBERON:0006240,8.25e-35,41;UBERON:0000955,1.12e-33,68;UBERON:0006238,1.12e-33,68;UBERON:0003075,2.13e-30,82;UBERON:0007284,2.13e-30,82;UBERON:0003528,2.75e-28,34;UBERON:0002020,2.75e-28,34;UBERON:0002346,5.25e-28,86;UBERON:0001893,1.45e-27,34;UBERON:0001869,2.18e-26,32;UBERON:0002791,4.90e-26,32;UBERON:0002619,1.87e-23,22;UBERON:0010371,5.30e-23,104;UBERON:0003056,2.36e-22,61;UBERON:0001950,1.57e-21,20;UBERON:0000956,1.09e-19,25;UBERON:0000203,1.09e-19,25;UBERON:0011216,1.73e-17,223;UBERON:0010314,2.20e-16,132;UBERON:0004121,4.95e-15,171;UBERON:0000924,4.95e-15,171;UBERON:0006601,4.95e-15,171;UBERON:0000025,1.17e-14,192;UBERON:0004111,4.59e-13,240;UBERON:0000125,3.88e-10,9;UBERON:0002308,3.88e-10,9;UBERON:0002420,6.60e-10,9;UBERON:0007245,6.60e-10,9;UBERON:0010009,6.60e-10,9;UBERON:0010011,6.60e-10,9;UBERON:0000454,6.60e-10,9;UBERON:0003076,4.01e-09,15;UBERON:0003057,4.01e-09,15;UBERON:0001894,1.01e-08,7;UBERON:0006222,1.01e-08,7;UBERON:0001871,3.22e-08,6;UBERON:0009663,6.88e-08,7;UBERON:0002298,2.22e-07,6;UBERON:0000200,2.56e-07,6;UBERON:0004732,3.84e-07,13 | |||
|phase1_expression=2.90685406832891,1.71280419112787,1.9733616573436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,1.18009283054671,0,0,0,0,0,0,0,0.880801318004542,0,0.200544447470142,0,0,0,0,0.145398238779565,0.755751887377619,0,0,0,0,0,0,0,0,0,0,0.376484679085209,0,0.449446968890169,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,1.21079900526674,0.736555271975129,0,0,0,0,0,0,0.16072558669708,0,0,0,3.51992488922645,1.09227722252426,1.77901850772711,1.28019066769952,0.800791974072025,0,0.661044872784862,0.954053754535364,0.569212969109448,1.76171156811282,0,0,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0.221729397462564,0.175669571386252,1.76821751921912,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0,0,0,0,0,10.3366703667732,32.3747299044906,20.7526779914096,2.01414658554573,6.84244895146661,1.22031028774085,2.20597848207521,0,5.09008451219255,4.04152870727106,2.36484109014977,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63500083292463,6.62648841607426,3.95059405756363,3.52447587052259,5.2987378683882,10.2193660541232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,12.6217596423101,0,0,0,0,12.9973779469909,0,0.491953754172454,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,1.01056513432752,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,15.7652236126702,9.15703713737551,18.0375460520472,36.3182282610743,22.3449107164693,0,0,0,0,0,0,2.85826432630578,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,1.49801404789436,5.9832291840805,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0.200506470303285,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,3.4120015221269,3.2317804002538,1.72732732881711,1.54227252690289,0,0.501689773854853,0,0,0,0.877039506583738,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0.229723400206959,1.52234282769651,3.0585488285695,2.84823593587081,2.62054953003568,2.46817363851717,1.94541993357815,3.7802200606668,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0.47003968731907,2.50634477090067,25.0551831146373,0,1.21079824314629,13.2012333684001,0.343505344755765,3.6868891717015,3.35514161838624,2.66958626739054,2.34465714482448,0,2.46174797895425,29.4796689538822,0.33307196799782,25.3776609158129,0,20.6576532773371,0,0,0,0,0,0,21.8712482508586,16.176982887209,0,0,0,4.78195171802567,2.21027132424918,17.1314268540908,0,0,0,0,0,1.02314474045374,6.51046477203762,2.3948309234694,0,13.5706584453331,10.4827950922892,7.98455192004777,0,0,12.3249927823915,0,0,0.472775363535873,11.7212746902098,0.583209226766509,22.0503743565281,30.1152071176705,12.9038189329187,6.10326945268333,4.75490817704266,8.57088094965288,8.7754158861589,0,0,2.38545801361771,0,0.23056390438806,0.269272933229316,0,0.31900115973192,0,0,0,0,2.82559859230266,0,0,0,0,1.58936578980379,0,0,0,0,3.98104772431402,4.5113357896703,6.72133159426988,0.889563386041866,1.60633120630454,1.67075119208729,3.10045211711114,8.02577647298789,23.8949734639846,0,0,0,1.18375320854817,35.0873076541125,5.50930970934882,8.02469561281797,0,0,1.32930774541437,0.330991955875499,0.313932918407225,0,0,0,0,0,0,1.57254001417827,0,0,0,0,3.58859361007152,0,5.42353777873278,0,0,13.1053347628669,0,0,2.98834192635094,0,0,0,33.975809576669,0,0.124252535565433,0,0,0,0,0,28.8201738580699,3.69644523008381,0,0,0,1.95497680890578,4.12488763221031,10.0502223440754,1.19807400299395,1.71690419254628,1.78537165953498,1.14211903227435,0,0,0,0.0824158583811665,0,0.196854963029498,0,27.0378094535163,8.17220436669454,16.396821143432,28.1955845024329,36.1433094085391,0,0,14.701392711242,0,0.472834243795189,0.314727528809989,0,93.0501291137465,0,13.579211201094,4.63464379255802,0,0,0,0,0,0.164185041498678,0,0.113312091520126,2.19828350517124,3.97520666736664,29.347231094072,35.3061046652982,0,0,1.28144895081234,0.943225830597996,1.65695622138878,5.95399226174341,0,0,0,1.63205341010842,0.5013797880454,0.612691153526923,0,0,38.1009317385804,23.184990331373,15.02291168478,12.6150023051816,6.65574309221114,9.93542447062135,1.10678907948985,0,2.57803499820801,1.42732666772484,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.67809053062115,0,0,0,0,0,0,0.79994958341972,0.426766918776564,0,0,0,0,0,7.03419042170084,24.7997066212368,0,8.19072286440104,0,0,0,0,0,0,12.008561224282,0,0,13.7450541706423,34.0071783181404,5.74681892605745,17.0246582319827,10.5870112413122,5.53258019713743,18.0852723107673,2.85538840518309,0,0,0,0,0,0,0,3.61009576076435,0,2.344542033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| ||
|short_description=p2@RAB3C | |short_description=p2@RAB3C | ||
}} | }} |
Latest revision as of 06:28, 18 September 2015
Short description: | p2@RAB3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB3C_5end |
Coexpression cluster: | C4507_large_thalamus_small_pituitary_medial_Mast_locus |
Association with transcript: | -22bp_to_ENST00000513316_5end |
EntrezGene: | RAB3C |
HGNC: | 30269 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data