FFCP PHASE1:Hg19::chr2:175677084..175677131,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:175677084..175677131,- to FFCP PHASE1:Hg19::chr2:175677084..175677131,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1123 | |EntrezGene=1123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1943 | |HGNC=1943 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000491801_5end | |||
|cluster_id=chr2:175677084..175677131,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_13_at_CHN1_5end | |||
|id=chr2:175677084..175677131,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.11e-11;82!UBERON:0006222;6.46e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;6.46e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,7.85e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.36e-35!41;UBERON:0001890!2.36e-35!41;UBERON:0006240!2.36e-35!41;UBERON:0003080!3.30e-34!42;UBERON:0001869!4.28e-33!32;UBERON:0001893!9.86e-33!34;UBERON:0001049!2.78e-32!57;UBERON:0005068!2.78e-32!57;UBERON:0006241!2.78e-32!57;UBERON:0007135!2.78e-32!57;UBERON:0002020!3.91e-32!34;UBERON:0003528!3.91e-32!34;UBERON:0002791!1.91e-31!33;UBERON:0002616!7.89e-31!59;UBERON:0001017!7.82e-28!82;UBERON:0000955!5.77e-27!69;UBERON:0006238!5.77e-27!69;UBERON:0005743!9.29e-26!86;UBERON:0000073!7.87e-25!94;UBERON:0001016!7.87e-25!94;UBERON:0000956!1.21e-24!25;UBERON:0000203!1.21e-24!25;UBERON:0002619!1.99e-24!22;UBERON:0001950!2.53e-22!20;UBERON:0003056!2.75e-22!61;UBERON:0003075!5.40e-22!86;UBERON:0007284!5.40e-22!86;UBERON:0002346!2.32e-21!90;UBERON:0007023!2.88e-18!115;UBERON:0000033!1.07e-17!123;UBERON:0000153!6.75e-17!129;UBERON:0007811!6.75e-17!129;UBERON:0004121!6.71e-16!169;UBERON:0000924!9.34e-16!173;UBERON:0006601!9.34e-16!173;UBERON:0002420!4.94e-12!9;UBERON:0007245!4.94e-12!9;UBERON:0010009!4.94e-12!9;UBERON:0010011!4.94e-12!9;UBERON:0000454!4.94e-12!9;UBERON:0009663!1.24e-09!7;UBERON:0000200!1.81e-09!6;UBERON:0002308!6.99e-09!9;UBERON:0000125!6.99e-09!9;UBERON:0000475!3.21e-08!365;UBERON:0001872!5.94e-08!5;UBERON:0002021!1.22e-07!5;UBERON:0000349!2.59e-07!5;UBERON:0000477!9.39e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.39e-51;20!UBERON:0001869;1.05e-46;32!UBERON:0002619;1.81e-46;22!UBERON:0001893;1.66e-43;34!UBERON:0000956;7.11e-41;25!UBERON:0000203;7.11e-41;25!UBERON:0002791;3.25e-40;32!UBERON:0003528;2.64e-35;34!UBERON:0002020;2.64e-35;34!UBERON:0002780;2.37e-32;41!UBERON:0001890;2.37e-32;41!UBERON:0000200;4.37e-32;6!UBERON:0001870;1.31e-23;3!UBERON:0000955;7.33e-21;68!UBERON:0000073;1.57e-19;53!UBERON:0002616;1.57e-19;53!UBERON:0001017;4.73e-18;75!UBERON:0002702;1.87e-16;2!UBERON:0001872;1.83e-14;5!UBERON:0005383;2.78e-11;3!UBERON:0005382;2.78e-11;3!UBERON:0001871;8.74e-11;6!UBERON:0001016;2.40e-10;83!UBERON:0001874;2.93e-09;1!UBERON:0002581;6.46e-09;1!UBERON:0002022;6.46e-09;1!UBERON:0003112;6.46e-09;1!UBERON:0011158;6.46e-09;1!UBERON:0007190;6.46e-09;1!UBERON:0003128;6.46e-09;1!UBERON:0001703;6.46e-09;1!UBERON:0002241;6.46e-09;1!UBERON:0000369;1.11e-08;4!UBERON:0002435;1.11e-08;4!UBERON:0000204;1.11e-08;4!UBERON:0002420;2.07e-08;9!UBERON:0007245;2.07e-08;9!UBERON:0010009;2.07e-08;9!UBERON:0010011;2.07e-08;9!UBERON:0000454;2.07e-08;9!UBERON:0002021;2.24e-07;5!UBERON:0011216;9.17e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.71e-51,20;UBERON:0001869,5.03e-50,32;UBERON:0002780,5.60e-50,41;UBERON:0001890,5.60e-50,41;UBERON:0003080,5.60e-50,41;UBERON:0006240,5.60e-50,41;UBERON:0001893,5.14e-47,34;UBERON:0002619,1.55e-46,22;UBERON:0002791,1.54e-43,32;UBERON:0000956,6.21e-41,25;UBERON:0000203,6.21e-41,25;UBERON:0003528,6.56e-41,34;UBERON:0002020,6.56e-41,34;UBERON:0000073,3.34e-38,53;UBERON:0002616,3.34e-38,53;UBERON:0000955,1.52e-36,68;UBERON:0006238,1.52e-36,68;UBERON:0001049,4.94e-36,56;UBERON:0005068,4.94e-36,56;UBERON:0006241,4.94e-36,56;UBERON:0007135,4.94e-36,56;UBERON:0003056,7.01e-33,61;UBERON:0000200,2.45e-32,6;UBERON:0001017,2.70e-30,81;UBERON:0001016,5.32e-27,89;UBERON:0001870,7.91e-24,3;UBERON:0003075,8.79e-24,82;UBERON:0007284,8.79e-24,82;UBERON:0002346,1.51e-22,86;UBERON:0007023,3.84e-21,114;UBERON:0010371,1.43e-20,104;UBERON:0010314,1.45e-17,132;UBERON:0002702,1.17e-16,2;UBERON:0001872,1.45e-14,5;UBERON:0004121,2.91e-14,171;UBERON:0000924,2.91e-14,171;UBERON:0006601,2.91e-14,171;UBERON:0011216,2.20e-11,223;UBERON:0005383,2.64e-11,3;UBERON:0005382,2.64e-11,3;UBERON:0001871,1.03e-10,6;UBERON:0001874,3.31e-09,1;UBERON:0003112,3.58e-09,1;UBERON:0011158,3.58e-09,1;UBERON:0003128,3.58e-09,1;UBERON:0001703,3.58e-09,1;UBERON:0002241,3.58e-09,1;UBERON:0004761,3.58e-09,1;UBERON:0009617,3.58e-09,1;UBERON:0002581,4.91e-09,1;UBERON:0007190,6.72e-09,1;UBERON:0002022,7.27e-09,1;UBERON:0000369,1.07e-08,4;UBERON:0002435,1.07e-08,4;UBERON:0000204,1.07e-08,4;UBERON:0010082,1.07e-08,4;UBERON:0000025,1.95e-08,192;UBERON:0002420,1.99e-08,9;UBERON:0007245,1.99e-08,9;UBERON:0010009,1.99e-08,9;UBERON:0010011,1.99e-08,9;UBERON:0000454,1.99e-08,9;UBERON:0002021,2.31e-07,5 | |||
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| ||
|short_description=p13@CHN1 | |||
}} | }} |
Latest revision as of 07:56, 18 September 2015
Short description: | p13@CHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CHN1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -3bp_to_ENST00000491801_5end |
EntrezGene: | CHN1 |
HGNC: | 1943 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelioid sarcoma | 7.85e-09 | 1 |