FFCP PHASE1:Hg19::chr4:72052964..72053013,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11030 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y6R1,A5JJ20 | |||
|association_with_transcript=0bp_to_ENST00000264485,ENST00000425175,NM_001098484,NM_001134742,uc003hfy.2,uc010iib.2,uc010iic.2_5end | |||
|cluster_id=chr4:72052964..72053013,+ | |||
|description=CAGE_peak_1_at_SLC4A4_5end | |||
|id=chr4:72052964..72053013,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.60e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-29!115;UBERON:0001049!2.49e-25!57;UBERON:0005068!2.49e-25!57;UBERON:0006241!2.49e-25!57;UBERON:0007135!2.49e-25!57;UBERON:0005743!2.09e-22!86;UBERON:0003080!5.27e-22!42;UBERON:0001017!1.16e-21!82;UBERON:0003075!1.36e-21!86;UBERON:0007284!1.36e-21!86;UBERON:0002780!2.15e-21!41;UBERON:0001890!2.15e-21!41;UBERON:0006240!2.15e-21!41;UBERON:0002616!5.50e-21!59;UBERON:0000073!1.70e-20!94;UBERON:0001016!1.70e-20!94;UBERON:0000955!1.72e-19!69;UBERON:0006238!1.72e-19!69;UBERON:0002346!3.72e-19!90;UBERON:0002020!5.46e-18!34;UBERON:0003528!5.46e-18!34;UBERON:0003056!8.74e-18!61;UBERON:0001893!8.95e-18!34;UBERON:0002791!3.06e-17!33;UBERON:0001869!1.33e-16!32;UBERON:0000956!3.03e-12!25;UBERON:0000203!3.03e-12!25;UBERON:0000153!4.88e-12!129;UBERON:0007811!4.88e-12!129;UBERON:0000475!6.67e-12!365;UBERON:0002619!1.25e-11!22;UBERON:0000033!1.30e-11!123;UBERON:0000025!1.58e-10!194;UBERON:0000483!1.80e-10!309;UBERON:0001950!2.77e-10!20;UBERON:0000119!4.64e-10!312;UBERON:0000481!5.78e-10!347;UBERON:0004121!9.69e-10!169;UBERON:0000924!8.82e-09!173;UBERON:0006601!8.82e-09!173;UBERON:0004111!1.26e-08!241;UBERON:0000477!4.66e-08!286;UBERON:0002308!2.11e-07!9;UBERON:0000125!2.11e-07!9;UBERON:0002420!3.01e-07!9;UBERON:0007245!3.01e-07!9;UBERON:0010009!3.01e-07!9;UBERON:0010011!3.01e-07!9;UBERON:0000454!3.01e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.13e-21;34!UBERON:0002020;2.13e-21;34!UBERON:0002791;1.56e-20;32!UBERON:0002780;2.35e-20;41!UBERON:0001890;2.35e-20;41!UBERON:0001893;2.51e-20;34!UBERON:0001869;2.51e-20;32!UBERON:0000073;3.50e-19;53!UBERON:0002616;3.50e-19;53!UBERON:0000956;2.69e-16;25!UBERON:0000203;2.69e-16;25!UBERON:0002619;3.80e-16;22!UBERON:0001950;3.81e-14;20!UBERON:0001017;3.90e-13;75!UBERON:0000955;1.75e-12;68!UBERON:0001016;4.39e-11;83!UBERON:0000125;1.49e-10;9!UBERON:0002308;1.49e-10;9!UBERON:0002420;3.63e-10;9!UBERON:0007245;3.63e-10;9!UBERON:0010009;3.63e-10;9!UBERON:0010011;3.63e-10;9!UBERON:0000454;3.63e-10;9!UBERON:0007023;1.33e-09;114!UBERON:0009663;1.85e-08;7!UBERON:0002298;1.56e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.45e-34,56;UBERON:0005068,1.45e-34,56;UBERON:0006241,1.45e-34,56;UBERON:0007135,1.45e-34,56;UBERON:0007023,2.78e-32,114;UBERON:0000073,2.13e-31,53;UBERON:0002616,2.13e-31,53;UBERON:0002780,1.39e-28,41;UBERON:0001890,1.39e-28,41;UBERON:0003080,1.39e-28,41;UBERON:0006240,1.39e-28,41;UBERON:0001017,5.69e-28,81;UBERON:0003075,4.24e-27,82;UBERON:0007284,4.24e-27,82;UBERON:0000955,1.83e-26,68;UBERON:0006238,1.83e-26,68;UBERON:0001016,3.03e-26,89;UBERON:0002346,6.88e-25,86;UBERON:0003528,1.70e-24,34;UBERON:0002020,1.70e-24,34;UBERON:0001893,3.50e-24,34;UBERON:0002791,1.79e-22,32;UBERON:0001869,1.99e-22,32;UBERON:0010314,1.06e-20,132;UBERON:0003056,2.85e-20,61;UBERON:0010371,1.19e-19,104;UBERON:0000956,5.91e-16,25;UBERON:0000203,5.91e-16,25;UBERON:0002619,6.15e-16,22;UBERON:0001950,6.27e-14,20;UBERON:0000025,1.23e-13,192;UBERON:0011216,6.41e-13,223;UBERON:0004121,1.23e-12,171;UBERON:0000924,1.23e-12,171;UBERON:0006601,1.23e-12,171;UBERON:0000125,2.24e-10,9;UBERON:0002308,2.24e-10,9;UBERON:0002420,3.82e-10,9;UBERON:0007245,3.82e-10,9;UBERON:0010009,3.82e-10,9;UBERON:0010011,3.82e-10,9;UBERON:0000454,3.82e-10,9;UBERON:0004111,8.89e-10,240;UBERON:0000483,1.57e-09,306;UBERON:0000119,3.51e-09,309;UBERON:0009663,2.56e-08,7;UBERON:0002298,2.14e-07,6;UBERON:0003076,2.25e-07,15;UBERON:0003057,2.25e-07,15 | |||
|phase1_expression=0.726713517082227,0.214100523890983,1.12763523276777,0,0.893922188854576,1.74467704820074,0,0,0,0.737201809504527,0,0,0,0.247532705920093,0.662794751455832,0.672325146451775,0,0,0,0,0.204000691244253,0,2.28988789704845,1.09499540058307,0.627713197974014,0,0,0,0,1.15148819429164,0.464448369948228,0,0,0,0,0,0.587200878669695,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,1.30216690771284,0.950452044448374,0.451725357233318,0.76791966692651,1.24930726552346,0.473554504088034,0.821127996921047,0.80642697289893,0.802320587350522,0.724122019413995,2.43806866313962,0,0.383587685530591,1.0843174571537,0,0.289693037921647,0,1.94653948121054,0.378139268656271,0.221729397462564,0.702678285545008,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96366342034382,1.13967460498122,3.17782033951725,1.43418310374407,0.709336764396714,1.68203280042692,1.06748995729705,0.24666754841716,0.622422070799533,0.134710672069688,0.490385709340376,0,0,0,0.312160076830321,0,0,0.23486899728753,0.323745888736263,0.98315564691574,0,0.245668634623536,0,2.37600571456411,0,0.910161361938026,0,0,0.375355559615893,0,3.95079858792754,0.919463387397059,2.25357088359895,0.453728732640084,2.15267562826634,1.06778694409284,0.847727604638247,0.300091096084402,1.23663035086127,2.31876486041066,2.41951913231067,3.37552664482532,0.779496041289589,2.52433774244115,1.65689817556139,0.80823028409406,1.77504796258307,1.0075209822764,1.01736355386293,0,0,0,0,0.265059536642971,0.580969714347592,0.414644220061482,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,11.4079531339648,0,4.72631925345123,0.882926198829301,0.122988438543114,0.514703430895577,0,0,0.100528972411631,0,0,0,0,0.579652024875384,1.6437217193015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.720599767084807,0,0.317489471460845,0.763976851116555,0,1.71072446022705,0.102827492703324,0,0.571652865261156,0,0,0.07333828582095,2.19761916788222,0,0,2.12750493267896,1.04007436911366,0.514414748524284,0,0.532844358032199,0.57191197463259,0,0,0,1.06617584622764,0,3.61727252471503,0.871533458600294,1.3996218765488,0,0,0,0.958499421966331,1.14861935834114,1.42636905040718,0.723906533337896,0,0.537182889719687,0,1.57624608161542,1.72502059887614,1.92514554419623,1.52456774533478,1.30139853857622,0,0.670065061337395,0,0,0,0,0.24538298343828,0.500170521059677,0,1.87173775377726,0,0.473107245101804,1.7571212248907,0,0,0,1.32845119707087,1.84369168541703,0.434418072340414,0.195801157462741,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,1.73675465473144,1.68808170616869,0.841980283299221,1.53766979106841,0,2.2519548960105,2.96836132889982,0.308419387605311,1.24293207719189,1.39616165223476,0.519254429183621,0.929683027679674,0.120859449591622,0,0,1.60740227430449,0.728364672026868,1.31124414959424,0.451199612907412,0.693138033939733,0,0,1.26661954671451,0,0,0.647747748306418,0,0.541892875087706,1.00337954770971,0.254876273045038,0,0.895499018888713,0,0,1.79515087581472,0.328014645699706,0.325378394664303,1.75169719801128,1.73981983154852,1.98022799809411,0,0,3.21367859688319,0.290012154876366,0.308097234229289,0.460511024178389,0.827019434907183,0.322260734604821,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0.255225424989168,0,0,3.77774816196768,1.3940745403212,0,0,3.47973196830029,0.18532421910392,0,0,0.632758849437452,1.71567174531442,0.511795582622668,0,1.59101623962968,0,1.07923474549989,1.37268514868027,0.353437207037059,0.202182481573316,0,0.421258456238981,1.46290121726877,0,0,1.50149902548784,0.707027159768564,0,0.551365343546124,0,0,0,0,0.608731130888112,0.6196469961995,0.845086807596724,1.57752487424457,0.687743287091848,1.426684205925,0.354761064070598,0.211107635297664,0,0.379473173765715,0.349934720244983,0,0,0,2.07116361708914,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.924843963529383,0.797131363644112,0,0,0,0,1.96558024679421,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,3.18138918693974,0.879049075631364,0,0,0,0,0,0,2.98244294329889,5.90811548924153,0.890469640183247,0,4.85588438694385,1.79323189425963,3.59169090190492,0,0,0,2.79935628895627,0,0.716084698702437,0,0.394573622547734,0,1.11136990144637,3.87733098438087,3.24688343566479,3.99227596002388,0,0,3.62499787717397,0,1.77977555204936,0,1.72371686620732,0,1.73624994933292,7.97167247232455,4.22087535188928,0,1.43753037910592,1.47773809476774,6.14279112031123,0,0,0.692552326534174,0.227884111694002,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0.210998064528027,0,0,1.94749775767882,0,1.50377859655677,0,0,0.123563938946503,0.104421949505455,3.77446344691791,0,3.04543779442941,0,0.19566461893209,0,0.394584402849391,2.41981432097328,0.91821828489147,1.95878396848313,0.300646838828985,0.3110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| |||
|short_description=p1@SLC4A4 | |||
}} |
Latest revision as of 11:48, 18 September 2015
Short description: | p1@SLC4A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC4A4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264485, ENST00000425175, NM_001098484, NM_001134742, uc003hfy.2, uc010iib.2, uc010iic.2_5end |
EntrezGene: | SLC4A4 |
HGNC: | 11030 |
UniProt: | Q9Y6R1A5JJ20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data