FFCP PHASE1:Hg19::chr4:72101794..72101803,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8671 | |EntrezGene=8671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11030 | |HGNC=11030 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-446bp_to_uc003hfz.2_5end | |association_with_transcript=-446bp_to_uc003hfz.2_5end | ||
|cluster_id=chr4:72101794..72101803,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_17_at_SLC4A4_5end | |description=CAGE_peak_17_at_SLC4A4_5end | ||
|id=chr4:72101794..72101803,+ | |id=chr4:72101794..72101803,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.37e-50;3!UBERON:0004140;3.44e-18;1!UBERON:0010227;4.44e-18;1!UBERON:0010122;1.51e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-68!115;UBERON:0001049!1.17e-64!57;UBERON:0005068!1.17e-64!57;UBERON:0006241!1.17e-64!57;UBERON:0007135!1.17e-64!57;UBERON:0003075!7.93e-56!86;UBERON:0007284!7.93e-56!86;UBERON:0002616!1.97e-55!59;UBERON:0002346!7.35e-53!90;UBERON:0002780!2.49e-52!41;UBERON:0001890!2.49e-52!41;UBERON:0006240!2.49e-52!41;UBERON:0001017!7.12e-52!82;UBERON:0005743!8.40e-52!86;UBERON:0003080!6.39e-51!42;UBERON:0000073!2.72e-48!94;UBERON:0001016!2.72e-48!94;UBERON:0000955!3.86e-48!69;UBERON:0006238!3.86e-48!69;UBERON:0002020!4.05e-47!34;UBERON:0003528!4.05e-47!34;UBERON:0001893!6.26e-47!34;UBERON:0001869!2.45e-46!32;UBERON:0002791!1.17e-44!33;UBERON:0003056!1.71e-35!61;UBERON:0002619!3.74e-33!22;UBERON:0004121!1.23e-32!169;UBERON:0000924!1.32e-31!173;UBERON:0006601!1.32e-31!173;UBERON:0000033!2.01e-31!123;UBERON:0000153!3.10e-31!129;UBERON:0007811!3.10e-31!129;UBERON:0000956!8.42e-29!25;UBERON:0000203!8.42e-29!25;UBERON:0001950!2.14e-28!20;UBERON:0002420!2.10e-21!9;UBERON:0007245!2.10e-21!9;UBERON:0010009!2.10e-21!9;UBERON:0010011!2.10e-21!9;UBERON:0000454!2.10e-21!9;UBERON:0000025!5.71e-21!194;UBERON:0002308!8.96e-21!9;UBERON:0000125!8.96e-21!9;UBERON:0004111!1.39e-17!241;UBERON:0001871!3.00e-17!7;UBERON:0009663!5.72e-16!7;UBERON:0000477!1.68e-15!286;UBERON:0000349!4.18e-15!5;UBERON:0003076!2.15e-14!15;UBERON:0003057!2.15e-14!15;UBERON:0000483!2.41e-14!309;UBERON:0000119!4.37e-14!312;UBERON:0000369!3.15e-13!4;UBERON:0002435!3.15e-13!4;UBERON:0000204!3.15e-13!4;UBERON:0010082!3.15e-13!4;UBERON:0000200!7.32e-12!6;UBERON:0000064!1.36e-11!219;UBERON:0004733!2.01e-11!12;UBERON:0002028!2.01e-11!12;UBERON:0007277!2.01e-11!12;UBERON:0004732!1.85e-10!13;UBERON:0005383!1.96e-10!3;UBERON:0005382!1.96e-10!3;UBERON:0003978!2.58e-10!3;UBERON:0009751!2.58e-10!3;UBERON:0000946!2.58e-10!3;UBERON:0002523!2.58e-10!3;UBERON:0005983!2.58e-10!3;UBERON:0002165!2.58e-10!3;UBERON:0002062!2.58e-10!3;UBERON:0007280!2.58e-10!3;UBERON:0001872!4.25e-10!5;UBERON:0002771!2.36e-09!3;UBERON:0000475!2.79e-09!365;UBERON:0002680!1.84e-08!9;UBERON:0001895!1.84e-08!9;UBERON:0010092!1.84e-08!9;UBERON:0000062!2.93e-08!511;UBERON:0000481!4.68e-08!347;UBERON:0001873!1.57e-07!2;UBERON:0002081!1.57e-07!2;UBERON:0010122!1.57e-07!2;UBERON:0003296!1.81e-07!4;UBERON:0010133!1.81e-07!4;UBERON:0002133!2.28e-07!2;UBERON:0000467!2.72e-07!625;UBERON:0000480!2.95e-07!626;UBERON:0001875!3.10e-07!2;UBERON:0006514!3.10e-07!2;UBERON:0001876!3.29e-07!2;UBERON:0001905!3.95e-07!2;UBERON:0002757!3.95e-07!2;UBERON:0010134!3.95e-07!2;UBERON:0002784!3.95e-07!2;UBERON:0005408!3.95e-07!2;UBERON:0001899!3.95e-07!2;UBERON:0001894!5.28e-07!7;UBERON:0006222!5.28e-07!7;UBERON:0002360!8.57e-07!2;UBERON:0000094!8.57e-07!2;UBERON:0007645!8.57e-07!2;UBERON:0001954!9.09e-07!2;UBERON:0003022!9.09e-07!2;UBERON:0002421!9.09e-07!2;UBERON:0002600!9.09e-07!2;UBERON:0000468!9.78e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.81e-25;6!UBERON:0002079;4.44e-18;1!UBERON:0002146;9.48e-18;1!UBERON:0005623;9.48e-18;1!UBERON:0002680;3.16e-17;9!UBERON:0001895;3.16e-17;9!UBERON:0004733;4.35e-13;12!UBERON:0002028;4.35e-13;12!UBERON:0004732;3.95e-12;13!UBERON:0009663;2.35e-10;7!UBERON:0000955;4.63e-10;68!UBERON:0002081;1.03e-09;2!UBERON:0001905;1.51e-09;2!UBERON:0001873;1.51e-09;2!UBERON:0001875;1.51e-09;2!UBERON:0002757;1.51e-09;2!UBERON:0010134;1.51e-09;2!UBERON:0005408;1.51e-09;2!UBERON:0006514;1.51e-09;2!UBERON:0001899;1.51e-09;2!UBERON:0000073;4.37e-09;53!UBERON:0002616;4.37e-09;53!UBERON:0002420;2.96e-08;9!UBERON:0000125;2.96e-08;9!UBERON:0007245;2.96e-08;9!UBERON:0002308;2.96e-08;9!UBERON:0010009;2.96e-08;9!UBERON:0010011;2.96e-08;9!UBERON:0000454;2.96e-08;9!UBERON:0000948;1.98e-07;22!UBERON:0004151;6.88e-07;3!UBERON:0003978;8.86e-07;3!UBERON:0000946;8.86e-07;3!UBERON:0005383;8.86e-07;3!UBERON:0005382;8.86e-07;3!UBERON:0001017;8.90e-07;75!UBERON:0001016;9.27e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.10e-25,6;UBERON:0006215,1.10e-25,6;UBERON:0002079,4.44e-18,1;UBERON:0002146,1.44e-17,1;UBERON:0005623,1.44e-17,1;UBERON:0002680,2.27e-17,9;UBERON:0001895,2.27e-17,9;UBERON:0010092,2.27e-17,9;UBERON:0000073,1.29e-14,53;UBERON:0002616,1.29e-14,53;UBERON:0001049,7.91e-14,56;UBERON:0005068,7.91e-14,56;UBERON:0006241,7.91e-14,56;UBERON:0007135,7.91e-14,56;UBERON:0004733,3.40e-13,12;UBERON:0002028,3.40e-13,12;UBERON:0007277,3.40e-13,12;UBERON:0004732,3.15e-12,13;UBERON:0003075,3.65e-12,82;UBERON:0007284,3.65e-12,82;UBERON:0010314,1.20e-11,132;UBERON:0002346,1.40e-11,86;UBERON:0000955,3.44e-11,68;UBERON:0006238,3.44e-11,68;UBERON:0007023,4.83e-11,114;UBERON:0003076,1.11e-10,15;UBERON:0003057,1.11e-10,15;UBERON:0009663,2.35e-10,7;UBERON:0002081,1.03e-09,2;UBERON:0010227,1.03e-09,2;UBERON:0001873,1.44e-09,2;UBERON:0010122,1.44e-09,2;UBERON:0001875,1.57e-09,2;UBERON:0006514,1.57e-09,2;UBERON:0010371,1.72e-09,104;UBERON:0001905,2.02e-09,2;UBERON:0002757,2.02e-09,2;UBERON:0010134,2.02e-09,2;UBERON:0005408,2.02e-09,2;UBERON:0001899,2.02e-09,2;UBERON:0001017,2.27e-09,81;UBERON:0001016,2.07e-08,89;UBERON:0002420,2.96e-08,9;UBERON:0000125,2.96e-08,9;UBERON:0007245,2.96e-08,9;UBERON:0002308,2.96e-08,9;UBERON:0010009,2.96e-08,9;UBERON:0010011,2.96e-08,9;UBERON:0000454,2.96e-08,9;UBERON:0000025,9.56e-08,192;UBERON:0004151,6.88e-07,3;UBERON:0000948,7.93e-07,24;UBERON:0005498,7.93e-07,24;UBERON:0004140,7.93e-07,24;UBERON:0009881,7.93e-07,24;UBERON:0004141,7.93e-07,24;UBERON:0003084,7.93e-07,24;UBERON:0007005,7.93e-07,24;UBERON:0004139,7.93e-07,24;UBERON:0004291,7.93e-07,24;UBERON:0005383,8.62e-07,3;UBERON:0005382,8.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528290604079356,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,3.80025734630388,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.32656082487949,9.15490417902499,1.65868889896837,1.77328571372128,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0.837847203816763,1.14580212005842,0.717873024576814,0.199679000498991,0,0.446342914883745,3.09043973438941,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0.319267718114302,0,0,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.202612753855184,1.56215619722769,0.413373593002368,0.634158101939068,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0.455324382702595,0,0,0,0,0.394636641377094,0,0,0,0.942693539496011,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0,0,0,0,0.653150243690884,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528290604079356,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,3.80025734630388,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.32656082487949,9.15490417902499,1.65868889896837,1.77328571372128,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0.837847203816763,1.14580212005842,0.717873024576814,0.199679000498991,0,0.446342914883745,3.09043973438941,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0.319267718114302,0,0,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.202612753855184,1.56215619722769,0.413373593002368,0.634158101939068,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0.455324382702595,0,0,0,0,0.394636641377094,0,0,0,0.942693539496011,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0,0,0,0,0.653150243690884,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@SLC4A4 | |short_description=p17@SLC4A4 | ||
}} | }} |
Latest revision as of 11:49, 18 September 2015
Short description: | p17@SLC4A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SLC4A4_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -446bp_to_uc003hfz.2_5end |
EntrezGene: | SLC4A4 |
HGNC: | 11030 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data