FFCP PHASE1:Hg19::chr12:48151938..48151973,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10411 | |EntrezGene=10411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16629 | |HGNC=16629 | ||
|TSSclassifier=strong | |||
|UniProt=F8VXK1 | |UniProt=F8VXK1 | ||
|association_with_transcript=0bp_to_ENST00000495953,ENST00000549347_5end | |association_with_transcript=0bp_to_ENST00000495953,ENST00000549347_5end | ||
|cluster_id=chr12:48151938..48151973,- | |||
|description=CAGE_peak_3_at_RAPGEF3_5end | |description=CAGE_peak_3_at_RAPGEF3_5end | ||
|id=chr12:48151938..48151973,- | |id=chr12:48151938..48151973,- | ||
|ontology_enrichment_celltype=CL:0002139!6.29e-14!24;CL:0000115!8.82e-12!35;CL:0000071!2.71e-11!18;CL:0002546!2.71e-11!18;CL:0002078!1.85e-10!44;CL:1000413!1.51e-07!9 | |ontology_enrichment_celltype=CL:0002139!6.29e-14!24;CL:0000115!8.82e-12!35;CL:0000071!2.71e-11!18;CL:0002546!2.71e-11!18;CL:0002078!1.85e-10!44;CL:1000413!1.51e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.36e-12;24!CL:0000115;4.49e-10;36!CL:0000071;4.89e-10;18!CL:0002543;3.83e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.60e-12,24;CL:0000115,1.63e-11,36;CL:0000071,2.32e-10,18;CL:0002546,2.32e-10,18;CL:0002543,1.28e-09,6;CL:0002078,2.47e-09,45 | |||
|ontology_enrichment_development_v019=CL:0002546;4.89e-10;18!UBERON:0006601;6.23e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-68!115;UBERON:0001049!6.63e-33!57;UBERON:0005068!6.63e-33!57;UBERON:0006241!6.63e-33!57;UBERON:0007135!6.63e-33!57;UBERON:0003075!4.25e-28!86;UBERON:0007284!4.25e-28!86;UBERON:0002616!5.67e-28!59;UBERON:0002346!6.96e-26!90;UBERON:0003080!1.54e-24!42;UBERON:0000955!1.42e-23!69;UBERON:0006238!1.42e-23!69;UBERON:0002780!1.73e-23!41;UBERON:0001890!1.73e-23!41;UBERON:0006240!1.73e-23!41;UBERON:0001017!3.04e-23!82;UBERON:0004111!5.53e-23!241;UBERON:0000477!8.46e-23!286;UBERON:0005743!2.14e-22!86;UBERON:0000025!3.39e-22!194;UBERON:0002020!2.66e-20!34;UBERON:0003528!2.66e-20!34;UBERON:0001893!4.21e-20!34;UBERON:0002791!2.11e-19!33;UBERON:0000073!1.73e-18!94;UBERON:0001016!1.73e-18!94;UBERON:0001869!1.96e-18!32;UBERON:0003056!2.90e-18!61;UBERON:0002619!7.36e-16!22;UBERON:0000153!8.62e-16!129;UBERON:0007811!8.62e-16!129;UBERON:0000119!9.41e-15!312;UBERON:0000033!1.55e-14!123;UBERON:0000483!2.04e-14!309;UBERON:0001950!7.53e-14!20;UBERON:0000956!3.71e-13!25;UBERON:0000203!3.71e-13!25;UBERON:0004121!4.20e-12!169;UBERON:0000924!2.40e-11!173;UBERON:0006601!2.40e-11!173;UBERON:0001986!2.71e-11!18;UBERON:0004638!2.71e-11!18;UBERON:0004852!2.71e-11!18;UBERON:0000064!4.72e-11!219;UBERON:0000467!5.86e-11!625;UBERON:0000480!7.41e-11!626;UBERON:0000468!1.43e-10!659;UBERON:0003103!5.57e-10!69;UBERON:0003076!2.06e-09!15;UBERON:0003057!2.06e-09!15;UBERON:0000487!2.59e-09!22;UBERON:0000922!3.44e-09!612;UBERON:0000062!3.84e-09!511;UBERON:0002308!5.39e-09!9;UBERON:0000125!5.39e-09!9;UBERON:0002050!9.00e-09!605;UBERON:0005423!9.00e-09!605;UBERON:0006914!1.31e-08!25;UBERON:0002420!1.49e-08!9;UBERON:0007245!1.49e-08!9;UBERON:0010009!1.49e-08!9;UBERON:0010011!1.49e-08!9;UBERON:0000454!1.49e-08!9;UBERON:0000481!1.76e-08!347;UBERON:0000923!1.84e-08!604;UBERON:0005291!1.84e-08!604;UBERON:0006598!1.84e-08!604;UBERON:0002532!1.84e-08!604;UBERON:0002298!7.39e-08!8;UBERON:0001871!1.04e-07!7;UBERON:0003915!1.51e-07!9;UBERON:0004700!1.51e-07!9;UBERON:0001917!1.51e-07!9;UBERON:0004733!1.66e-07!12;UBERON:0002028!1.66e-07!12;UBERON:0007277!1.66e-07!12;UBERON:0003887!2.15e-07!21;UBERON:0009663!3.68e-07!7;UBERON:0000489!6.93e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.72e-19;34!UBERON:0003528;9.49e-19;34!UBERON:0002020;9.49e-19;34!UBERON:0002780;7.32e-18;41!UBERON:0001890;7.32e-18;41!UBERON:0007023;7.78e-18;114!UBERON:0002791;9.65e-18;32!UBERON:0001869;1.10e-17;32!UBERON:0002619;1.46e-16;22!UBERON:0000073;3.23e-15;53!UBERON:0002616;3.23e-15;53!UBERON:0000956;4.37e-14;25!UBERON:0000203;4.37e-14;25!UBERON:0001950;9.38e-14;20!UBERON:0000125;7.33e-11;9!UBERON:0002308;7.33e-11;9!UBERON:0004638;4.89e-10;18!UBERON:0001986;4.89e-10;18!UBERON:0004852;4.89e-10;18!UBERON:0000955;2.55e-09;68!UBERON:0001017;1.56e-08;75!UBERON:0001638;3.83e-08;9!UBERON:0003920;3.83e-08;9!UBERON:0004582;3.83e-08;9!UBERON:0009663;4.54e-08;7!UBERON:0002420;5.20e-08;9!UBERON:0007245;5.20e-08;9!UBERON:0010009;5.20e-08;9!UBERON:0010011;5.20e-08;9!UBERON:0000454;5.20e-08;9!UBERON:0000487;1.06e-07;22!UBERON:0000200;5.68e-07;6!UBERON:0001016;5.90e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.86e-70,114;UBERON:0001049,2.21e-28,56;UBERON:0005068,2.21e-28,56;UBERON:0006241,2.21e-28,56;UBERON:0007135,2.21e-28,56;UBERON:0000073,4.43e-27,53;UBERON:0002616,4.43e-27,53;UBERON:0002780,5.03e-25,41;UBERON:0001890,5.03e-25,41;UBERON:0003080,5.03e-25,41;UBERON:0006240,5.03e-25,41;UBERON:0003528,4.80e-23,34;UBERON:0002020,4.80e-23,34;UBERON:0001893,8.90e-23,34;UBERON:0003075,2.05e-22,82;UBERON:0007284,2.05e-22,82;UBERON:0000955,2.45e-21,68;UBERON:0006238,2.45e-21,68;UBERON:0004111,6.72e-21,240;UBERON:0002346,8.31e-21,86;UBERON:0002791,1.74e-20,32;UBERON:0001869,2.36e-20,32;UBERON:0001017,8.80e-20,81;UBERON:0000025,1.77e-19,192;UBERON:0010371,4.72e-17,104;UBERON:0010314,5.97e-17,132;UBERON:0002619,7.54e-17,22;UBERON:0001016,1.05e-16,89;UBERON:0003056,2.01e-16,61;UBERON:0000956,2.47e-14,25;UBERON:0000203,2.47e-14,25;UBERON:0001950,5.33e-14,20;UBERON:0000483,9.87e-12,306;UBERON:0000119,1.97e-11,309;UBERON:0000125,8.40e-11,9;UBERON:0002308,8.40e-11,9;UBERON:0004638,2.32e-10,18;UBERON:0001986,2.32e-10,18;UBERON:0004852,2.32e-10,18;UBERON:0004121,6.19e-10,171;UBERON:0000924,6.19e-10,171;UBERON:0006601,6.19e-10,171;UBERON:0011216,5.33e-09,223;UBERON:0001638,1.69e-08,9;UBERON:0003920,1.69e-08,9;UBERON:0004582,1.69e-08,9;UBERON:0002420,4.06e-08,9;UBERON:0007245,4.06e-08,9;UBERON:0010009,4.06e-08,9;UBERON:0010011,4.06e-08,9;UBERON:0000454,4.06e-08,9;UBERON:0009663,5.13e-08,7;UBERON:0000487,5.96e-08,22;UBERON:0003887,8.13e-08,12;UBERON:0000200,5.08e-07,6;UBERON:0005423,5.88e-07,581;UBERON:0003103,8.80e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,2.61958150995425,0.364295288292542,0,0.649094787309367,0.696518949197069,0.797747763113191,0,0,0,0.596287222100115,2.58070378531837,1.73570250803797,0.56530794192401,3.35599548967925,0.825354125820202,1.25396979922086,5.94358546089456,3.20189636418039,2.00832367658802,0,0,1.70843440283719,1.47065232138347,0.81014194788176,1.7859945656816,1.57170560838319,1.57656072676651,4.5994991239765,2.84779697870439,1.83201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0.936480230490962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.720599767084807,0.25248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,1.690605505112,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,1.56869953835371,0,0.527758144464379,2.27466768141793,1.53084334748864,0.647747748306418,3.08454505380579,0,1.50506932156456,2.54876273045038,0,0.671624264166535,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0,0,0,0.0962221127255121,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5485889075764,0,0,0,0.23874448473769,0,0,0.994147647766298,1.96937182974718,0,0,0,2.78947183551498,1.38141957765574,0,0,0,0,0,0,0,0.789147245095469,0,0,4.84666373047609,1.57705766875147,0,0,0.0874599999961957,5.79999660347835,0,0.254253650292766,0,0,0,0,0.885741385813839,2.41192877250816,1.52581736317083,0.995213339381022,0.591095237907095,0.658156191461918,0,0,3.92446318369365,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.95879369790977,0,0,0.995261931078505,1.06149077404007,0.611030144933625,0,0,0,2.42644078730437,2.40773294189637,2.57690890297873,0,0,0,6.70793484843964,1.20990716048664,0.30607276163049,2.40109002588254,0,0,0,0,0,0,2.27687636823834,0,0.520679215005393,0.0979923974143777,0,1.7472666824203,0,0,0,0,1.64881328030313,0,0.451961481561065,0,0,2.46912104227927,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,2.32739144116388,0,0,0,2.79282401272254,4.35404805622199,2.87149209830726,2.79550600698588,3.004582336956,2.90122894674434,3.09043973438941,0,0,0,0,0,0,0,3.97614844904652,3.26888174667781,0.321506296930038,0,0,0,0,1.76173714308272,0,2.12775409707835,1.78345599658994,0,0,0,3.57347663186684,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,2.84422503995411,2.24795422962573,0,0,1.70859860108311,1.88645166119599,0.828478110694391,0.992332043623902,0,0,0,3.26410682021684,5.013797880454,2.45076461410769,1.31149052283922,0,0.886068179966986,2.3184990331373,2.754200475543,0.573409195690071,1.44207766997908,1.80079568530012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53744911152768,0,0.303859956177382,2.62691028688288,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.376481328569,0,1.91560630868582,1.23069818544453,0,2.62797559364028,1.61475645631851,0,0,0,0,0,0,0,0,2.55715116387475,0,0,0,0,0,1.48582686160468,1.56215619722769,1.44680757550829,2.72687983833799,0.546974809018219,4.93431990171464,3.96968942711435,0,0.383287282918786,1.07140367175657,0.672567444437648,0,0.455324382702595,0.887023701626388,0,0,1.2914249265598,2.63091094251396,0,0,2.59027206406696,2.82808061848803,0,0.913158720509496,0.215927591218621,0,1.57248397188644,0,0,0,0,0,0,0,3.01159151174194,0,0,3.81048345171836,0.68732060563215,0.62041277132864,0,0,0,0,1.29485767437579,1.43727929598746,2.3196288626764,0.485710993059139,0,0,0,0,0,0,0.926089897295336,0.437119121007915,0,1.47088993052343,0,1.17785080268967,1.78227840196252,0.8453114551668,0,1.87967835959707,5.54337836572764,0,0,0,0,1.46067277649303,1.83491713361816,1.86341458096887,0,3.33158301935482,0,1.5870805215462,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,1.36401656792831,0.535928260312357,3.31667775783512,1.86179392551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| ||
|short_description=p3@RAPGEF3 | |short_description=p3@RAPGEF3 | ||
}} | }} |
Latest revision as of 13:02, 18 September 2015
Short description: | p3@RAPGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAPGEF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000495953, ENST00000549347_5end |
EntrezGene: | RAPGEF3 |
HGNC: | 16629 |
UniProt: | F8VXK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.60e-12 | 24 |
endothelial cell | 1.63e-11 | 36 |
blood vessel endothelial cell | 2.32e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.32e-10 | 18 |
vein endothelial cell | 1.28e-09 | 6 |
meso-epithelial cell | 2.47e-09 | 45 |