FFCP PHASE1:Hg19::chr8:57358393..57358427,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5179 | |EntrezGene=5179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8831 | |HGNC=8831 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-186bp_to_ENST00000523274_5end | |association_with_transcript=-186bp_to_ENST00000523274_5end | ||
|cluster_id=chr8:57358393..57358427,- | |||
|coexpression_cluster_id=C309 | |coexpression_cluster_id=C309 | ||
|description=CAGE_peak_2_at_PENK_5end | |description=CAGE_peak_2_at_PENK_5end | ||
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|ontology_enrichment_celltype=CL:0000153!2.80e-12!9;CL:0000447!2.80e-12!9;CL:0000667!3.38e-10!6;CL:0000058!3.38e-10!6;CL:0000138!3.38e-10!6;CL:0000499!5.51e-08!27;CL:0000135!7.94e-08!3;CL:0000386!7.94e-08!3;CL:0000388!7.94e-08!3;CL:0000057!1.96e-07!75;CL:0000327!2.17e-07!14;CL:0002552!3.90e-07!5;CL:0000055!6.47e-07!180 | |ontology_enrichment_celltype=CL:0000153!2.80e-12!9;CL:0000447!2.80e-12!9;CL:0000667!3.38e-10!6;CL:0000058!3.38e-10!6;CL:0000138!3.38e-10!6;CL:0000499!5.51e-08!27;CL:0000135!7.94e-08!3;CL:0000386!7.94e-08!3;CL:0000388!7.94e-08!3;CL:0000057!1.96e-07!75;CL:0000327!2.17e-07!14;CL:0002552!3.90e-07!5;CL:0000055!6.47e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000138;2.51e-28;6!CL:0000153;1.17e-26;9!CL:0000447;1.17e-26;9!CL:0000135;2.69e-20;3!CL:0000388;2.69e-20;3!CL:0000499;6.34e-18;28!CL:0000327;8.61e-16;15!CL:0002552;5.20e-12;5!CL:0002556;1.27e-10;6!CL:0002540;4.15e-10;6!CL:0000062;6.48e-07;9 | |ontology_enrichment_celltype_v019=CL:0000138;2.51e-28;6!CL:0000153;1.17e-26;9!CL:0000447;1.17e-26;9!CL:0000135;2.69e-20;3!CL:0000388;2.69e-20;3!CL:0000499;6.34e-18;28!CL:0000327;8.61e-16;15!CL:0002552;5.20e-12;5!CL:0002556;1.27e-10;6!CL:0002540;4.15e-10;6!CL:0000062;6.48e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.58e-28,6;CL:0000138,2.58e-28,6;CL:0000153,1.25e-26,9;CL:0000447,1.25e-26,9;CL:0000135,2.44e-20,3;CL:0000388,2.44e-20,3;CL:0000499,6.35e-18,28;CL:0000327,8.95e-16,15;CL:0002552,4.47e-12,5;CL:0002556,1.27e-10,6;CL:0002540,4.29e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.70e-08;1!UBERON:0003852;2.70e-08;1!UBERON:0006222;9.40e-08;1 | |ontology_enrichment_development_v019=UBERON:0003099;2.70e-08;1!UBERON:0003852;2.70e-08;1!UBERON:0006222;9.40e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@PENK | |short_description=p2@PENK | ||
}} | }} |
Latest revision as of 14:23, 18 September 2015
Short description: | p2@PENK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PENK_5end |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | -186bp_to_ENST00000523274_5end |
EntrezGene: | PENK |
HGNC: | 8831 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.58e-28 | 6 |
chondrocyte | 2.58e-28 | 6 |
GAG secreting cell | 1.25e-26 | 9 |
carbohydrate secreting cell | 1.25e-26 | 9 |
fibrocyte | 2.44e-20 | 3 |
tendon cell | 2.44e-20 | 3 |
stromal cell | 6.35e-18 | 28 |
extracellular matrix secreting cell | 8.95e-16 | 15 |
fibroblast of gingiva | 4.47e-12 | 5 |
fibroblast of periodontium | 1.27e-10 | 6 |
mesenchymal stem cell of the bone marrow | 4.29e-10 | 6 |